BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00031440
         (597 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95820.1| retrotransposon protein, putative, unclassified [...    96   7e-35
emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera]    96   7e-35
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]    91   2e-34
gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsi...    99   2e-34
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...    94   2e-34
gb|ABA99612.1| retrotransposon protein, putative, unclassified [...    94   2e-34
emb|CAN63433.1| hypothetical protein VITISV_033829 [Vitis vinifera]    91   3e-34
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212...    95   4e-34
gb|EXB44219.1| ABC transporter C family member 9 [Morus notabilis]     86   4e-34
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    89   5e-34
gb|ABW74566.1| integrase [Boechera divaricarpa]                        85   1e-33
emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]    88   3e-33
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]      91   6e-33
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...    84   1e-32
emb|CAN77815.1| hypothetical protein VITISV_023977 [Vitis vinifera]    87   1e-32
gb|AAP53706.1| retrotransposon protein, putative, unclassified [...    97   4e-32
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    89   5e-32
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...    82   9e-32
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza...    86   9e-32
gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty...    91   1e-31

>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1142

 Score = 95.5 bits (236), Expect(2) = 7e-35
 Identities = 55/130 (42%), Positives = 82/130 (63%), Gaps = 2/130 (1%)
 Frame = -1

Query: 384  VCTLARLEAFLAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLK 205
            V  L  +   +A+ A  + +I Q+D+KSAFLNG L EE+Y++ PEGF V+  E  V+ LK
Sbjct: 720  VARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLK 779

Query: 204  KFLNGLKQALRVWFSRMD-L*L*HVYTQYKLDLSLYHLKRGNKQLFVQKYVDDIINAGNT 28
            K L GLKQA RVW+S++D   +   + +   + +LY  K G   L V  YVDD+I  GN+
Sbjct: 780  KALYGLKQAPRVWYSQIDKYFIQKGFAKSISEPTLYVNKTGTDILIVSLYVDDLIYTGNS 839

Query: 27   -TLVENFQKD 1
              ++++F+KD
Sbjct: 840  EKMMQDFKKD 849



 Score = 78.2 bits (191), Expect(2) = 7e-35
 Identities = 32/69 (46%), Positives = 49/69 (71%)
 Frame = -2

Query: 581 AMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHEYG 402
           AM +E++ I K  TW  V+RP ++++IG  W++  K N D ++ +YKARLV+KG+  + G
Sbjct: 651 AMEDEIHMIEKNNTWELVDRPRDREVIGVKWVYKTKLNLDGSVQKYKARLVAKGFKQKPG 710

Query: 401 LDYQETYAP 375
           +DY ETYAP
Sbjct: 711 IDYYETYAP 719


>emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera]
          Length = 1102

 Score = 96.3 bits (238), Expect(2) = 7e-35
 Identities = 57/130 (43%), Positives = 82/130 (63%), Gaps = 2/130 (1%)
 Frame = -1

Query: 384  VCTLARLEAFLAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLK 205
            V  L  +   LA+ A     I QMD+KSAFLNG L EE++++ PEGF V+  E  VYLLK
Sbjct: 688  VARLDTIRMLLALAAQKGWNIHQMDVKSAFLNGYLEEEIFVEQPEGFIVKGMEEKVYLLK 747

Query: 204  KFLNGLKQALRVWFSRMDL*L*HV-YTQYKLDLSLYHLKRGNKQLFVQKYVDDIINAGNT 28
            K L GLKQA R W+SR+D  L  + +T+   + +LY  K  ++ L V  YVDD++  G++
Sbjct: 748  KALYGLKQAPRAWYSRIDSHLLGLGFTKSLSEFTLYFRKVCDETLVVSLYVDDLLVTGSS 807

Query: 27   -TLVENFQKD 1
               ++NF+K+
Sbjct: 808  MKQIDNFKKE 817



 Score = 77.4 bits (189), Expect(2) = 7e-35
 Identities = 35/74 (47%), Positives = 49/74 (66%)
 Frame = -2

Query: 596 EK*KSAMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGY 417
           +K   AM E L  I K +TW  V++P +K  IG  W++  K NSD +IN++KARLV KGY
Sbjct: 614 KKWMDAMKEXLKMIEKNQTWELVDKPRHKRAIGVKWVYRTKLNSDGSINKHKARLVVKGY 673

Query: 416 VHEYGLDYQETYAP 375
              +G+D+ ET+AP
Sbjct: 674 AQMFGVDFSETFAP 687


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score = 90.5 bits (223), Expect(2) = 2e-34
 Identities = 53/126 (42%), Positives = 77/126 (61%), Gaps = 2/126 (1%)
 Frame = -1

Query: 384  VCTLARLEAFLAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLK 205
            V     +   LA+ A+    + Q D+KSAFLNG+L+EEVY   PEGF V  KE HVY LK
Sbjct: 1003 VARFETVRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYXSQPEGFIVPDKEEHVYRLK 1062

Query: 204  KFLNGLKQALRVWFSRMD-L*L*HVYTQYKLDLSLYHLKRG-NKQLFVQKYVDDIINAGN 31
              L GLKQA R W+S++D   + + + + K + +LY  ++G N  L +  YVDD+I  G+
Sbjct: 1063 XALYGLKQAPRAWYSKIDSYFVENGFEKSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGS 1122

Query: 30   TTLVEN 13
            ++ + N
Sbjct: 1123 SSSLIN 1128



 Score = 82.0 bits (201), Expect(2) = 2e-34
 Identities = 35/70 (50%), Positives = 52/70 (74%)
 Frame = -2

Query: 584  SAMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHEY 405
            SAM EE+  I K +TW  VE PE+K++IG  W+F  KY +D +I ++KARLV+KGY  ++
Sbjct: 933  SAMKEEIAAIEKNETWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQH 992

Query: 404  GLDYQETYAP 375
            G+DY +T++P
Sbjct: 993  GVDYDDTFSP 1002


>gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1347

 Score = 99.4 bits (246), Expect(2) = 2e-34
 Identities = 58/124 (46%), Positives = 76/124 (61%), Gaps = 2/124 (1%)
 Frame = -1

Query: 366  LEAFLAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLKKFLNGL 187
            + A LA  A  K R+ QMD+KSAFLNG+L EEVY+  P GF +E KE  V  L K L GL
Sbjct: 927  IRALLAYAAQMKWRLYQMDVKSAFLNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGL 986

Query: 186  KQALRVWFSRMD-L*L*HVYTQYKLDLSLYHLKRGNKQLFVQKYVDDIINAGNTT-LVEN 13
            KQA R W+ R+D   + + + +   D +LY  K+G   L V  YVDD+I  GN T L+  
Sbjct: 987  KQAPRAWYERIDSYFIQNGFARSMNDAALYSKKKGEDVLIVSLYVDDLIITGNNTHLINT 1046

Query: 12   FQKD 1
            F+K+
Sbjct: 1047 FKKN 1050



 Score = 73.2 bits (178), Expect(2) = 2e-34
 Identities = 31/71 (43%), Positives = 49/71 (69%)
 Frame = -2

Query: 587  KSAMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHE 408
            + AM EE+  I K +TW  V++PE K++I   W++ IK ++     ++KARLV++G+  E
Sbjct: 850  EEAMNEEIKVIEKNRTWKLVDKPEKKNVISVKWIYKIKTDASGNHVKHKARLVARGFSQE 909

Query: 407  YGLDYQETYAP 375
            YG+DY ET+AP
Sbjct: 910  YGIDYLETFAP 920


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score = 94.0 bits (232), Expect(2) = 2e-34
 Identities = 54/130 (41%), Positives = 81/130 (62%), Gaps = 2/130 (1%)
 Frame = -1

Query: 384  VCTLARLEAFLAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLK 205
            V  L  +   +A+ A  + +I Q+D+KSAFLNG L EE+Y++ PEGF V+  E  V+ LK
Sbjct: 930  VARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLK 989

Query: 204  KFLNGLKQALRVWFSRMD-L*L*HVYTQYKLDLSLYHLKRGNKQLFVQKYVDDIINAGNT 28
            K L GLKQA R W+S++D   +   + +   + +LY  K G   L V  YVDD+I  GN+
Sbjct: 990  KALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPTLYVNKTGTDILIVSLYVDDLIYTGNS 1049

Query: 27   -TLVENFQKD 1
              ++++F+KD
Sbjct: 1050 EKMMQDFKKD 1059



 Score = 78.6 bits (192), Expect(2) = 2e-34
 Identities = 32/69 (46%), Positives = 49/69 (71%)
 Frame = -2

Query: 581  AMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHEYG 402
            AM +E++ I K  TW  V+RP ++++IG  W++  K N D ++ +YKARLV+KG+  + G
Sbjct: 861  AMEDEIHMIEKNNTWELVDRPRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPG 920

Query: 401  LDYQETYAP 375
            +DY ETYAP
Sbjct: 921  IDYYETYAP 929


>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1198

 Score = 94.0 bits (232), Expect(2) = 2e-34
 Identities = 54/130 (41%), Positives = 81/130 (62%), Gaps = 2/130 (1%)
 Frame = -1

Query: 384  VCTLARLEAFLAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLK 205
            V  L  +   +A+ A  + +I Q+D+KSAFLNG L EE+Y++ PEGF V+  E  V+ LK
Sbjct: 793  VARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLK 852

Query: 204  KFLNGLKQALRVWFSRMD-L*L*HVYTQYKLDLSLYHLKRGNKQLFVQKYVDDIINAGNT 28
            K L GLKQA R W+S++D   +   + +   + +LY  K G   L V  YVDD+I  GN+
Sbjct: 853  KALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPTLYVNKTGTDILIVSLYVDDLIYTGNS 912

Query: 27   -TLVENFQKD 1
              ++++F+KD
Sbjct: 913  EKMMQDFKKD 922



 Score = 78.6 bits (192), Expect(2) = 2e-34
 Identities = 32/69 (46%), Positives = 49/69 (71%)
 Frame = -2

Query: 581 AMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHEYG 402
           AM +E++ I K  TW  V+RP ++++IG  W++  K N D ++ +YKARLV+KG+  + G
Sbjct: 724 AMEDEIHMIEKNNTWELVDRPRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPG 783

Query: 401 LDYQETYAP 375
           +DY ETYAP
Sbjct: 784 IDYYETYAP 792


>emb|CAN63433.1| hypothetical protein VITISV_033829 [Vitis vinifera]
          Length = 1072

 Score = 90.9 bits (224), Expect(2) = 3e-34
 Identities = 55/130 (42%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
 Frame = -1

Query: 384  VCTLARLEAFLAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLK 205
            V  L  +   LA+ A  K +I ++D+KSAFLNG L EE++++ PEGF ++ KE  VYLLK
Sbjct: 732  VARLDTIRMLLALAAQRKWKIYKLDVKSAFLNGYLEEEIFVEQPEGFAIKGKEEKVYLLK 791

Query: 204  KFLNGLKQALRVWFSRMDL*L*HVYTQYKL-DLSLYHLKRGNKQLFVQKYVDDIINAG-N 31
            K L GL+QA R W+SR+D  L  +     L + +LY  K     L V  YVDD++  G N
Sbjct: 792  KALYGLRQAPRAWYSRIDTHLLTLGFHKSLSEFTLYIEKIEEDILIVSLYVDDLLVTGSN 851

Query: 30   TTLVENFQKD 1
               V  F+ +
Sbjct: 852  AGFVNKFKAE 861



 Score = 80.5 bits (197), Expect(2) = 3e-34
 Identities = 36/69 (52%), Positives = 49/69 (71%)
 Frame = -2

Query: 581 AMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHEYG 402
           AM EEL+ I+K  TW  V+RP +K  IG  W++  K NSD +IN++KARLV KGY   +G
Sbjct: 663 AMQEELDMIDKNNTWELVDRPSHKKPIGVKWVYRTKLNSDGSINKHKARLVVKGYAQMFG 722

Query: 401 LDYQETYAP 375
           +D+ ET+AP
Sbjct: 723 VDFSETFAP 731


>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score = 95.1 bits (235), Expect(2) = 4e-34
 Identities = 58/129 (44%), Positives = 79/129 (61%), Gaps = 5/129 (3%)
 Frame = -1

Query: 375  LARLEAF---LAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLK 205
            +ARLEA    LA  +Y    + QMD+KSAFLNG ++EEVY++ P GF+      HVY L+
Sbjct: 1725 VARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLE 1784

Query: 204  KFLNGLKQALRVWFSRMD-L*L*HVYTQYKLDLSLYHLKRGNKQLFVQKYVDDII-NAGN 31
            K L GLKQA R W+ R+    L + +   K+D +L+   + N  L VQ YVDDII  + N
Sbjct: 1785 KALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTN 1844

Query: 30   TTLVENFQK 4
            ++L E F K
Sbjct: 1845 SSLCEEFSK 1853



 Score = 75.9 bits (185), Expect(2) = 4e-34
 Identities = 36/69 (52%), Positives = 45/69 (65%)
 Frame = -2

Query: 581  AMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHEYG 402
            AM EELNQ  + K W  V RP N  IIG  W+F  K + +  I R KARLV++GY  E G
Sbjct: 1656 AMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEG 1715

Query: 401  LDYQETYAP 375
            +DY+ET+AP
Sbjct: 1716 IDYEETFAP 1724


>gb|EXB44219.1| ABC transporter C family member 9 [Morus notabilis]
          Length = 2077

 Score = 86.3 bits (212), Expect(2) = 4e-34
 Identities = 51/124 (41%), Positives = 77/124 (62%), Gaps = 2/124 (1%)
 Frame = -1

Query: 366  LEAFLAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLKKFLNGL 187
            +   +A+VA    +I Q+D+KSAFLNG L EE++++ P  F  +  E  VY LKK L GL
Sbjct: 1017 IRLLIALVAQKGWKIFQLDVKSAFLNGYLKEEIFVEQPPCFLKKGNEDKVYQLKKALYGL 1076

Query: 186  KQALRVWFSRMDL*L*HV-YTQYKLDLSLYHLKRGNKQLFVQKYVDDIINAG-NTTLVEN 13
            KQA R W+SR+D  L  + + +   + +LY  + G+  L +  YVDD++  G N TLV+ 
Sbjct: 1077 KQAPRAWYSRIDDHLLQLGFKRSPSEATLYVQQAGDDLLIISLYVDDLLITGSNITLVQK 1136

Query: 12   FQKD 1
            F+K+
Sbjct: 1137 FKKE 1140



 Score = 84.7 bits (208), Expect(2) = 4e-34
 Identities = 37/71 (52%), Positives = 50/71 (70%)
 Frame = -2

Query: 587  KSAMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHE 408
            K+AM EELN INK  TW  VERP +K +IG  W+F  K N D ++N+ K RLV KGY  +
Sbjct: 940  KAAMEEELNMINKNDTWQLVERPTDKRVIGVKWVFRTKLNPDGSVNKLKVRLVVKGYSQQ 999

Query: 407  YGLDYQETYAP 375
            +G+D+ +T+AP
Sbjct: 1000 FGVDFSDTFAP 1010


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 89.0 bits (219), Expect(2) = 5e-34
 Identities = 53/126 (42%), Positives = 77/126 (61%), Gaps = 2/126 (1%)
 Frame = -1

Query: 384  VCTLARLEAFLAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLK 205
            V     +   LA+ A+      Q D+KSAFLNG+L+EEVY+   EGF V  KE HVY LK
Sbjct: 832  VARFETVRTLLALAAHMHWCXYQFDVKSAFLNGELVEEVYVSQXEGFIVPXKEEHVYRLK 891

Query: 204  KFLNGLKQALRVWFSRMD-L*L*HVYTQYKLDLSLYHLKRG-NKQLFVQKYVDDIINAGN 31
            K L GLKQA R W+S++D   + + + + K + +LY  ++G N  L +  YVDD+I  G+
Sbjct: 892  KALYGLKQAPRAWYSKIDSYFVENGFERSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGS 951

Query: 30   TTLVEN 13
            ++ + N
Sbjct: 952  SSSLIN 957



 Score = 82.0 bits (201), Expect(2) = 5e-34
 Identities = 35/70 (50%), Positives = 52/70 (74%)
 Frame = -2

Query: 584 SAMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHEY 405
           SAM EE+  I K +TW  VE PE+K++IG  W+F  KY +D +I ++KARLV+KGY  ++
Sbjct: 762 SAMKEEIAAIEKNETWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQH 821

Query: 404 GLDYQETYAP 375
           G+DY +T++P
Sbjct: 822 GVDYDDTFSP 831


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score = 85.1 bits (209), Expect(2) = 1e-33
 Identities = 56/123 (45%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
 Frame = -1

Query: 366  LEAFLAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLKKFLNGL 187
            L   LA+ AY    I Q D+KSAFLNG+L EEVY+  PEGF VE +E  VY L K L GL
Sbjct: 740  LRTLLALGAYMHWPIYQFDVKSAFLNGELREEVYVDQPEGFIVEGREGFVYRLYKALYGL 799

Query: 186  KQALRVWFSRMDL*L*HV-YTQYKLDLSLYHLKRG-NKQLFVQKYVDDIINAGNT-TLVE 16
            KQA R W++++D       + + K + +LY  K+G    L V  YVDD+I  G++ +LV 
Sbjct: 800  KQAPRAWYNKIDSYFAETGFERSKSEPTLYIKKQGAGDILVVCLYVDDMIYMGSSASLVS 859

Query: 15   NFQ 7
             F+
Sbjct: 860  EFK 862



 Score = 84.3 bits (207), Expect(2) = 1e-33
 Identities = 38/74 (51%), Positives = 50/74 (67%)
 Frame = -2

Query: 596 EK*KSAMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGY 417
           E+ + AM EE+  I K +TW  VE PE K  IG  W+F  KY +D  I +YKARLV KGY
Sbjct: 660 EEWRKAMEEEIASIEKNQTWQLVELPEEKHSIGVKWVFKTKYQADDNIQKYKARLVVKGY 719

Query: 416 VHEYGLDYQETYAP 375
             EYG+DY++T++P
Sbjct: 720 AQEYGVDYEKTFSP 733


>emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]
          Length = 894

 Score = 87.8 bits (216), Expect(2) = 3e-33
 Identities = 39/71 (54%), Positives = 52/71 (73%)
 Frame = -2

Query: 587 KSAMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHE 408
           + AM EEL  INK +TW  VERP+N  +IG  W+F  K NSD +I ++KA+LV KGY  +
Sbjct: 383 RRAMQEELKMINKNETWQLVERPKNHKVIGVKWVFKTKLNSDGSICKHKAKLVVKGYAQQ 442

Query: 407 YGLDYQETYAP 375
           YG+DY+ET+AP
Sbjct: 443 YGVDYKETFAP 453



 Score = 80.5 bits (197), Expect(2) = 3e-33
 Identities = 44/124 (35%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
 Frame = -1

Query: 366 LEAFLAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLKKFLNGL 187
           +     + A +   I Q+D+KSAFLNG + +E+Y++ P+G     KE +VYLL+K L GL
Sbjct: 460 IRLLFVLAAQNSWHIHQLDVKSAFLNGFVDKEIYVEQPDGVVAPSKEDYVYLLRKALYGL 519

Query: 186 KQALRVWFSRMDL*L*HV-YTQYKLDLSLYHLKRGNKQLFVQKYVDDIINAGN-TTLVEN 13
           KQA R W+  MD  L  + + + + + +LY      + L +  YVDD++  GN   L+++
Sbjct: 520 KQAPRAWYETMDKHLTKLGFVRSQSEATLYVKTNDVQLLIISLYVDDMLVTGNQPKLIQS 579

Query: 12  FQKD 1
           F+ +
Sbjct: 580 FKDE 583


>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1136

 Score = 91.3 bits (225), Expect(2) = 6e-33
 Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 4/132 (3%)
 Frame = -1

Query: 384  VCTLARLEAFLAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLK 205
            V  L  +   +A+ A  + +I Q+D+KSAFLNG L EE+Y++ PE F V+  E  V+ LK
Sbjct: 714  VARLETIHTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPERFSVQGGENKVFRLK 773

Query: 204  KFLNGLKQALRVWFSRMDL*L*HVYTQYKLDLS---LYHLKRGNKQLFVQKYVDDIINAG 34
            K L GLKQA R W+S++D     +   +   +S   LY  K G   L V  YVDD+I  G
Sbjct: 774  KALYGLKQAPRAWYSQIDKYF--IQKGFAKSISEPILYVKKTGTDILIVSLYVDDLIYTG 831

Query: 33   NT-TLVENFQKD 1
            N+  L+++F+KD
Sbjct: 832  NSEKLMQDFKKD 843



 Score = 75.9 bits (185), Expect(2) = 6e-33
 Identities = 31/68 (45%), Positives = 48/68 (70%)
 Frame = -2

Query: 581 AMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHEYG 402
           AM +E++ I K  TW  V+RP ++++IG  W++  K N D ++ +YKARLV+KG+  + G
Sbjct: 645 AMEDEIHMIEKNNTWELVDRPRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPG 704

Query: 401 LDYQETYA 378
           +DY ETYA
Sbjct: 705 IDYYETYA 712


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score = 83.6 bits (205), Expect(2) = 1e-32
 Identities = 53/131 (40%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
 Frame = -1

Query: 384  VCTLARLEAFLAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLK 205
            V     +   LA+ A   L + Q D+KSAFLNGDL EEVY+  P+GF +   E  VY L+
Sbjct: 903  VARFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQGFMITGNENKVYKLR 962

Query: 204  KFLNGLKQALRVWFSRMD-L*L*HVYTQYKLDLSLYHLKRGNKQ-LFVQKYVDDIINAGN 31
            K L GLKQA R W+S++D       + +   + +LY  K+G  + L V  YVDD+I  G+
Sbjct: 963  KALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLYLKKQGTDEFLLVCLYVDDMIYIGS 1022

Query: 30   T-TLVENFQKD 1
            + +LV +F+ +
Sbjct: 1023 SKSLVNDFKSN 1033



 Score = 82.4 bits (202), Expect(2) = 1e-32
 Identities = 34/71 (47%), Positives = 51/71 (71%)
 Frame = -2

Query: 587  KSAMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHE 408
            K+AM EE+  I +  TW  V+ PE K++IG  W+F  KYN+D +I ++KARLV+KGY  +
Sbjct: 832  KNAMIEEIQAIERNSTWELVDAPEGKNVIGLKWVFRTKYNADGSIQKHKARLVAKGYSQQ 891

Query: 407  YGLDYQETYAP 375
             G+D+ ET++P
Sbjct: 892  QGVDFDETFSP 902


>emb|CAN77815.1| hypothetical protein VITISV_023977 [Vitis vinifera]
          Length = 1120

 Score = 87.4 bits (215), Expect(2) = 1e-32
 Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
 Frame = -1

Query: 384  VCTLARLEAFLAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLK 205
            V  L  +   LA+ A    +  Q+D+K AFLNG L EE+Y++ PEGF+V+ +E  VYLLK
Sbjct: 716  VARLDTIRMLLALTAQKGWKTYQLDVKXAFLNGYLQEEIYVEQPEGFQVKGQEEKVYLLK 775

Query: 204  KFLNGLKQALRVWFSRMDL*L*HV-YTQYKLDLSLYHLKRGNKQLFVQKYVDDIINAG-N 31
            K L GLKQA R W+SR+D  L  + + +   + +LY        + V  YVDD++  G N
Sbjct: 776  KALYGLKQAPRAWYSRIDEHLQSLGFVKSPSEATLYVKGTDANLIVVSVYVDDLLVTGSN 835

Query: 30   TTLVENFQKD 1
              LV+ F+ +
Sbjct: 836  EKLVKEFKAE 845



 Score = 78.6 bits (192), Expect(2) = 1e-32
 Identities = 33/69 (47%), Positives = 48/69 (69%)
 Frame = -2

Query: 581 AMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHEYG 402
           AM EEL  I K  TW  V+RP+++ +IG  W++  K N+D ++N+YKARLV KGY   +G
Sbjct: 647 AMKEELRMIEKNDTWELVDRPQHRKVIGVKWVYRTKLNADGSVNKYKARLVVKGYSQVFG 706

Query: 401 LDYQETYAP 375
           +D+ E +AP
Sbjct: 707 VDFSEXFAP 715


>gb|AAP53706.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1419

 Score = 96.7 bits (239), Expect(2) = 4e-32
 Identities = 59/123 (47%), Positives = 77/123 (62%), Gaps = 4/123 (3%)
 Frame = -1

Query: 375  LARLEAF---LAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLK 205
            +AR+EA    LA  A    ++ QMD+KSAFLNG + EEVY+K P GF+      HV+ L 
Sbjct: 994  VARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPNHVFKLS 1053

Query: 204  KFLNGLKQALRVWFSRM-DL*L*HVYTQYKLDLSLYHLKRGNKQLFVQKYVDDIINAGNT 28
            K L GLKQA R W+ R+ +  L   +T  K+D +L+ LK G+ QLFVQ YVDDII   +T
Sbjct: 1054 KALYGLKQAPRAWYDRLKNFLLAKGFTMGKVDKTLFVLKHGDNQLFVQIYVDDIIFGCST 1113

Query: 27   TLV 19
              V
Sbjct: 1114 HAV 1116



 Score = 67.8 bits (164), Expect(2) = 4e-32
 Identities = 32/70 (45%), Positives = 42/70 (60%)
 Frame = -2

Query: 584  SAMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHEY 405
            +AM EEL    + K W  VE P   ++IG  W+F  K N D  I R KARLV++G+    
Sbjct: 924  NAMHEELENFERNKVWTLVEPPSGHNVIGTKWVFKNKQNEDGLIVRNKARLVAQGFTQVE 983

Query: 404  GLDYQETYAP 375
            GLD+ ET+AP
Sbjct: 984  GLDFDETFAP 993


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 89.4 bits (220), Expect(2) = 5e-32
 Identities = 54/123 (43%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
 Frame = -1

Query: 384  VCTLARLEAFLAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLK 205
            V  +  +  FLA+    +  + QMD+ +AFL+GDL EEVY+K PEGFK   K   V  L+
Sbjct: 891  VAKMTSVRCFLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKN-KVCKLQ 949

Query: 204  KFLNGLKQALRVWFSRMDL*L*HVYTQYKL-DLSLYHLKRGNKQLFVQKYVDDIINAGNT 28
            K L GLKQA R WF+++   L     Q  L D SL+  +RGN  + +  YVDD+I AGN 
Sbjct: 950  KSLYGLKQASRQWFAKLTTALKEYGFQQSLADYSLFTYRRGNIVMNLLVYVDDLILAGND 1009

Query: 27   TLV 19
              V
Sbjct: 1010 NKV 1012



 Score = 74.7 bits (182), Expect(2) = 5e-32
 Identities = 32/71 (45%), Positives = 48/71 (67%)
 Frame = -2

Query: 587  KSAMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHE 408
            + AMA+E+  +   +TW  V+ P  K  IG  W++ IKYN+D +I RYKARLV++G+   
Sbjct: 820  REAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQI 879

Query: 407  YGLDYQETYAP 375
             G+DYQE ++P
Sbjct: 880  EGIDYQEXFSP 890


>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score = 82.4 bits (202), Expect(2) = 9e-32
 Identities = 33/69 (47%), Positives = 52/69 (75%)
 Frame = -2

Query: 581 AMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHEYG 402
           A  +E++ IN+ +TW  V++P    +IG  W+F IK N+D +IN++KARLV+KGYV E+G
Sbjct: 735 ACEDEIDSINRNQTWKLVDKPHGVKVIGLKWIFKIKRNADGSINKFKARLVAKGYVQEHG 794

Query: 401 LDYQETYAP 375
           +D++E +AP
Sbjct: 795 IDFEEVFAP 803



 Score = 80.9 bits (198), Expect(2) = 9e-32
 Identities = 43/123 (34%), Positives = 77/123 (62%), Gaps = 4/123 (3%)
 Frame = -1

Query: 375  LARLEAFLAIVAYHKLR---IRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLK 205
            +AR+E+   +++    +   +  +D+K+AFL+G+L EEVY+  PEGF+ + +E+ V+ L 
Sbjct: 804  VARIESIRLLISLASAKGWELHHLDVKTAFLHGELNEEVYVTQPEGFEKKGEEHKVFKLS 863

Query: 204  KFLNGLKQALRVWFSRMDL*L*HV-YTQYKLDLSLYHLKRGNKQLFVQKYVDDIINAGNT 28
            K L GL+QA R W +++D  L  + + +   + S+Y  + G+K L +  YVDD+   GN+
Sbjct: 864  KALYGLRQAPRAWNTKLDRVLKSLRFKKCMKESSVYRREEGDKLLIIAIYVDDLFVTGNS 923

Query: 27   TLV 19
            T +
Sbjct: 924  TKI 926


>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
            gi|31429795|gb|AAP51797.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1350

 Score = 85.9 bits (211), Expect(2) = 9e-32
 Identities = 51/129 (39%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
 Frame = -1

Query: 384  VCTLARLEAFLAIVAYHKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLK 205
            V  L  +   +A+ A  + +I Q+D+KSAFLNG L EE+Y++ PEGF V+  E  V+ LK
Sbjct: 853  VARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLK 912

Query: 204  KFLNGLKQALRVWFSRMDL*L*HVYTQYKLDLSLYHLKRGNKQLFVQKYVDDIINAGNT- 28
            K L GLKQA R W+S++D        QY +    +        L V  YVDD+I   N+ 
Sbjct: 913  KALYGLKQAPRAWYSQID--------QYFIQKG-FAKSISTDILIVSLYVDDLIYTANSE 963

Query: 27   TLVENFQKD 1
             ++++F+KD
Sbjct: 964  KMMQDFKKD 972



 Score = 77.4 bits (189), Expect(2) = 9e-32
 Identities = 32/69 (46%), Positives = 48/69 (69%)
 Frame = -2

Query: 581 AMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHEYG 402
           AM +E++ I K  TW  V+RP ++ +IG  W++  K N D ++ +YKARLV+KG+  + G
Sbjct: 784 AMEDEIHMIEKNNTWELVDRPRDRKVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPG 843

Query: 401 LDYQETYAP 375
           +DY ETYAP
Sbjct: 844 IDYYETYAP 852


>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
            aspartic, catalytic [Medicago truncatula]
          Length = 1715

 Score = 90.9 bits (224), Expect(2) = 1e-31
 Identities = 56/129 (43%), Positives = 80/129 (62%), Gaps = 5/129 (3%)
 Frame = -1

Query: 375  LARLEAFLAIVAY---HKLRIRQMDIKSAFLNGDLIEEVYLKTPEGFKVEKKEYHVYLLK 205
            +ARLEA   +++Y   H + + QMD+KSAFLNG + EEVY+K P GF+  K   HVY LK
Sbjct: 1292 VARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLK 1351

Query: 204  KFLNGLKQALRVWFSRM-DL*L*HVYTQYKLDLSLYHLKRGNKQLFVQKYVDDII-NAGN 31
            K L GLKQA R W+ R+ +  + + + + ++D +L+        L VQ YVDDII  + N
Sbjct: 1352 KSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTN 1411

Query: 30   TTLVENFQK 4
             +L + F K
Sbjct: 1412 ASLCKEFSK 1420



 Score = 72.0 bits (175), Expect(2) = 1e-31
 Identities = 33/69 (47%), Positives = 43/69 (62%)
 Frame = -2

Query: 581  AMAEELNQINKAKTWIFVERPENKDIIGFWWLFTIKYNSDSTINRYKARLVSKGYVHEYG 402
            AM EELNQ  +   W  V +P  K+IIG  W+F  K N    + R KARLV++GY  + G
Sbjct: 1223 AMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEG 1282

Query: 401  LDYQETYAP 375
            +DY ET+AP
Sbjct: 1283 IDYTETFAP 1291