BLASTX nr result
ID: Ephedra27_contig00031424
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00031424
(404 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,... 65 1e-08
gb|EOY14228.1| Pentatricopeptide repeat (PPR) superfamily protei... 64 2e-08
gb|EOY14227.1| Pentatricopeptide repeat (PPR) superfamily protei... 64 2e-08
gb|EOY14225.1| Pentatricopeptide repeat superfamily protein, put... 64 2e-08
gb|ESW25082.1| hypothetical protein PHAVU_003G005900g [Phaseolus... 63 3e-08
ref|XP_004486552.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera] 62 8e-08
ref|XP_006587955.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_006391807.1| hypothetical protein EUTSA_v10023351mg [Eutr... 61 1e-07
ref|XP_002305195.1| pentatricopeptide repeat-containing family p... 61 1e-07
ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi... 60 3e-07
ref|XP_006391798.1| hypothetical protein EUTSA_v10023987mg [Eutr... 59 7e-07
ref|XP_006382709.1| hypothetical protein POPTR_0005s04650g [Popu... 59 9e-07
ref|XP_006382123.1| hypothetical protein POPTR_0006s28580g [Popu... 59 9e-07
ref|XP_006389307.1| hypothetical protein POPTR_0030s00270g [Popu... 59 9e-07
gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protei... 59 9e-07
ref|NP_176481.2| pentatricopeptide repeat protein RPF3 [Arabidop... 59 9e-07
ref|NP_176501.1| transacting siRNA generating locus [Arabidopsis... 59 9e-07
ref|XP_002319049.1| predicted protein [Populus trichocarpa] 59 9e-07
ref|XP_002328386.1| predicted protein [Populus trichocarpa] 59 9e-07
>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 619
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/89 (35%), Positives = 49/89 (55%)
Frame = -1
Query: 401 GYTNQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLLP 222
GY +VL+L++EMEYR P +++F ++R LC +L++AE YL M R L P
Sbjct: 453 GYERDNQIQEVLKLYYEMEYRPLSPGLLVFTPLIRSLCHCGKLEQAEKYLRIMKGRSLNP 512
Query: 221 DALVYKTVSHALLQAGLPTEAMQVYRSMI 135
VY+ + L+ A+Q+Y MI
Sbjct: 513 SQQVYEALIAGHLEKSDTARALQLYNEMI 541
>gb|EOY14228.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
isoform 4 [Theobroma cacao]
Length = 569
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/90 (34%), Positives = 50/90 (55%)
Frame = -1
Query: 404 AGYTNQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLL 225
AGY + N QV +L++EMEY+ P + +F ++RCLC +L+EAE YL M R ++
Sbjct: 451 AGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAERYLRIMKDRSVV 510
Query: 224 PDALVYKTVSHALLQAGLPTEAMQVYRSMI 135
+Y+ + + G T A +Y M+
Sbjct: 511 LSEDIYEALITGHFEKGDKTGAGIIYNEMV 540
>gb|EOY14227.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
isoform 3 [Theobroma cacao]
Length = 563
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/90 (34%), Positives = 50/90 (55%)
Frame = -1
Query: 404 AGYTNQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLL 225
AGY + N QV +L++EMEY+ P + +F ++RCLC +L+EAE YL M R ++
Sbjct: 451 AGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAERYLRIMKDRSVV 510
Query: 224 PDALVYKTVSHALLQAGLPTEAMQVYRSMI 135
+Y+ + + G T A +Y M+
Sbjct: 511 LSEDIYEALITGHFEKGDKTGAGIIYNEMV 540
>gb|EOY14225.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
[Theobroma cacao]
Length = 596
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/90 (34%), Positives = 50/90 (55%)
Frame = -1
Query: 404 AGYTNQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLL 225
AGY + N QV +L++EMEY+ P + +F ++RCLC +L+EAE YL M R ++
Sbjct: 451 AGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAERYLRIMKDRSVV 510
Query: 224 PDALVYKTVSHALLQAGLPTEAMQVYRSMI 135
+Y+ + + G T A +Y M+
Sbjct: 511 LSEDIYEALITGHFEKGDKTGAGIIYNEMV 540
>gb|ESW25082.1| hypothetical protein PHAVU_003G005900g [Phaseolus vulgaris]
Length = 532
Score = 63.2 bits (152), Expect = 3e-08
Identities = 29/88 (32%), Positives = 49/88 (55%)
Frame = -1
Query: 401 GYTNQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLLP 222
GY +E +VL+L++EMEY+ P + +F V+RCLC ++++AE YL M R +
Sbjct: 440 GYAGKEEVQEVLKLYYEMEYKRMSPGLSVFVTVVRCLCHCGKVEDAERYLRVMRERLVAV 499
Query: 221 DALVYKTVSHALLQAGLPTEAMQVYRSM 138
D VY+ + ++ G A+ + M
Sbjct: 500 DVSVYEELIDGYIKKGNTARALYLREEM 527
>ref|XP_004486552.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cicer arietinum]
gi|502183720|ref|XP_004517198.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cicer arietinum]
Length = 551
Score = 62.8 bits (151), Expect = 5e-08
Identities = 27/88 (30%), Positives = 53/88 (60%)
Frame = -1
Query: 401 GYTNQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLLP 222
GY ++ +VL++++EMEY+ P + ++ +++CLC +L+++E YL M R L+P
Sbjct: 456 GYAIKDEVQEVLKIYYEMEYKSMCPGLSVYSSMIKCLCRFGKLEDSEKYLRIMKGRSLVP 515
Query: 221 DALVYKTVSHALLQAGLPTEAMQVYRSM 138
+ +Y+T+ +Q G A+Q+ M
Sbjct: 516 NVNIYETLIACHVQKGNNDRALQLRNEM 543
>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
Length = 642
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/93 (33%), Positives = 50/93 (53%)
Frame = -1
Query: 404 AGYTNQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLL 225
A Y QVL+L++EMEYR P +++F ++R LC ++L++AE YL M R +
Sbjct: 444 ASYGKLGEIQQVLKLYYEMEYRSLSPGLLVFESIIRSLCQCRKLEKAEKYLRIMKDRSIA 503
Query: 224 PDALVYKTVSHALLQAGLPTEAMQVYRSMIKPV 126
VY+T+ + G A Q++ M+ V
Sbjct: 504 ISTCVYETLISGYFEKGDELRASQLHNEMLTMV 536
>ref|XP_006587955.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like isoform X2 [Glycine max]
gi|571479752|ref|XP_006587956.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like isoform X3 [Glycine max]
gi|571479754|ref|XP_003533688.2| PREDICTED:
pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like isoform X1 [Glycine max]
Length = 554
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/88 (31%), Positives = 49/88 (55%)
Frame = -1
Query: 401 GYTNQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLLP 222
GY +E +VL+L++EMEYR P + +F +++C C ++++AE YL M R + P
Sbjct: 462 GYARKEEVQEVLKLYYEMEYRCVSPGLSVFGTIVQCFCRCGKVEDAEKYLRIMKGRLVRP 521
Query: 221 DALVYKTVSHALLQAGLPTEAMQVYRSM 138
D VY+ + ++ G A+ + M
Sbjct: 522 DVSVYQALIDGYMKKGESARALHLRDEM 549
>ref|XP_006391807.1| hypothetical protein EUTSA_v10023351mg [Eutrema salsugineum]
gi|557088313|gb|ESQ29093.1| hypothetical protein
EUTSA_v10023351mg [Eutrema salsugineum]
Length = 624
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/90 (33%), Positives = 51/90 (56%)
Frame = -1
Query: 401 GYTNQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLLP 222
G + + L LF+EME + +P+V+ + ++ CLC R +A L+ M+ RKL P
Sbjct: 259 GLCKYRDVNEALDLFNEMENKGIKPNVITYNSLISCLCNYGRWSDASRLLSDMIKRKLNP 318
Query: 221 DALVYKTVSHALLQAGLPTEAMQVYRSMIK 132
D + + + AL++ G EA ++Y+ MIK
Sbjct: 319 DVVTFNALIDALVKEGKLLEAEELYKEMIK 348
>ref|XP_002305195.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222848159|gb|EEE85706.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 556
Score = 61.2 bits (147), Expect = 1e-07
Identities = 29/90 (32%), Positives = 49/90 (54%)
Frame = -1
Query: 404 AGYTNQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLL 225
+GY ++L+L++EMEYR P ++ F +++ LC +L+EAE YL M+ R L
Sbjct: 451 SGYAKNNQIQEMLKLYYEMEYRSLSPGLMGFTSLIKGLCNCGKLEEAEKYLRIMIGRSLN 510
Query: 224 PDALVYKTVSHALLQAGLPTEAMQVYRSMI 135
P VY+ + + G A+ +Y M+
Sbjct: 511 PREDVYEALIKVYFEKGDKRRALNLYNEMV 540
>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Vitis vinifera]
Length = 547
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/90 (33%), Positives = 49/90 (54%)
Frame = -1
Query: 404 AGYTNQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLL 225
A Y QVL+L++EMEYR P ++ F ++R LC ++L++AE YL M R +
Sbjct: 444 ASYGKLGEIQQVLKLYYEMEYRSLSPGLLAFESLIRSLCQCRKLEKAEKYLRIMKDRSIA 503
Query: 224 PDALVYKTVSHALLQAGLPTEAMQVYRSMI 135
VY+T+ + + G A Q++ M+
Sbjct: 504 ISTCVYETLISSYFEKGDELRASQLHNEMV 533
>ref|XP_006391798.1| hypothetical protein EUTSA_v10023987mg [Eutrema salsugineum]
gi|557088304|gb|ESQ29084.1| hypothetical protein
EUTSA_v10023987mg [Eutrema salsugineum]
Length = 654
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/90 (31%), Positives = 50/90 (55%)
Frame = -1
Query: 401 GYTNQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLLP 222
G + + L LF+EME + +P+V+ + ++ CLC R + L+ M+ RKL P
Sbjct: 289 GLCKYRDVNEALDLFNEMENKGIKPNVITYNSLISCLCNYGRWSDTSRLLSDMIKRKLNP 348
Query: 221 DALVYKTVSHALLQAGLPTEAMQVYRSMIK 132
D + + + AL++ G EA ++Y+ MI+
Sbjct: 349 DVVTFNALIDALMKEGKLLEAEELYKEMIR 378
>ref|XP_006382709.1| hypothetical protein POPTR_0005s04650g [Populus trichocarpa]
gi|550338075|gb|ERP60506.1| hypothetical protein
POPTR_0005s04650g [Populus trichocarpa]
Length = 531
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/89 (29%), Positives = 49/89 (55%)
Frame = -1
Query: 401 GYTNQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLLP 222
G N +R+F +ME +P+VV + ++ LC ++ ++EA +L++MV R + P
Sbjct: 124 GLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPP 183
Query: 221 DALVYKTVSHALLQAGLPTEAMQVYRSMI 135
D + Y T+ H G EA ++++ M+
Sbjct: 184 DVVTYNTILHGFCSLGQLNEATRLFKEMV 212
>ref|XP_006382123.1| hypothetical protein POPTR_0006s28580g [Populus trichocarpa]
gi|550337275|gb|ERP59920.1| hypothetical protein
POPTR_0006s28580g [Populus trichocarpa]
Length = 567
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/88 (31%), Positives = 49/88 (55%)
Frame = -1
Query: 401 GYTNQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLLP 222
GY++ + +LF M + F+P V + +++ C KR+DEA+ N+M+ + L P
Sbjct: 323 GYSSCTQVVEARKLFDVMITKGFKPVVFSYNILINGYCKAKRIDEAKQLFNEMIHQGLTP 382
Query: 221 DALVYKTVSHALLQAGLPTEAMQVYRSM 138
+ + Y T+ H L Q G EA ++R+M
Sbjct: 383 NKVTYNTLIHGLCQLGRVREAQDLFRNM 410
>ref|XP_006389307.1| hypothetical protein POPTR_0030s00270g [Populus trichocarpa]
gi|550312067|gb|ERP48221.1| hypothetical protein
POPTR_0030s00270g [Populus trichocarpa]
Length = 585
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/88 (32%), Positives = 49/88 (55%)
Frame = -1
Query: 401 GYTNQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLLP 222
GY Q + +LF M + F PSV ++ +++ C ++RL+EA+ L++M R L P
Sbjct: 325 GYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTP 384
Query: 221 DALVYKTVSHALLQAGLPTEAMQVYRSM 138
D + Y T+ QAG P A ++++ M
Sbjct: 385 DTVTYSTLMQGFCQAGRPQVAQKLFKEM 412
>gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/87 (33%), Positives = 48/87 (55%)
Frame = -1
Query: 392 NQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLLPDAL 213
N +N L LF EM+ + P+VV + ++RCLC R +A L+ M+ RK+ P+ +
Sbjct: 251 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 310
Query: 212 VYKTVSHALLQAGLPTEAMQVYRSMIK 132
+ + A ++ G EA ++Y MIK
Sbjct: 311 TFSALIDAFVKEGKLVEAEKLYDEMIK 337
>ref|NP_176481.2| pentatricopeptide repeat protein RPF3 [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/87 (33%), Positives = 48/87 (55%)
Frame = -1
Query: 392 NQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLLPDAL 213
N +N L LF EM+ + P+VV + ++RCLC R +A L+ M+ RK+ P+ +
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 212 VYKTVSHALLQAGLPTEAMQVYRSMIK 132
+ + A ++ G EA ++Y MIK
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIK 353
>ref|NP_176501.1| transacting siRNA generating locus [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein;
64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis
thaliana] gi|23197834|gb|AAN15444.1| unknown protein
[Arabidopsis thaliana] gi|332195938|gb|AEE34059.1|
transacting siRNA generating locus [Arabidopsis
thaliana]
Length = 630
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/87 (33%), Positives = 48/87 (55%)
Frame = -1
Query: 392 NQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLLPDAL 213
N +N L LF EM+ + P+VV + ++RCLC R +A L+ M+ RK+ P+ +
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 212 VYKTVSHALLQAGLPTEAMQVYRSMIK 132
+ + A ++ G EA ++Y MIK
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIK 354
>ref|XP_002319049.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/88 (32%), Positives = 49/88 (55%)
Frame = -1
Query: 401 GYTNQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLLP 222
GY Q + +LF M + F PSV ++ +++ C ++RL+EA+ L++M R L P
Sbjct: 325 GYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTP 384
Query: 221 DALVYKTVSHALLQAGLPTEAMQVYRSM 138
D + Y T+ QAG P A ++++ M
Sbjct: 385 DTVTYSTLMQGFCQAGRPQVAQKLFKEM 412
>ref|XP_002328386.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/89 (29%), Positives = 49/89 (55%)
Frame = -1
Query: 401 GYTNQENAYQVLRLFHEMEYREFEPSVVIFCLVLRCLCLNKRLDEAEMYLNKMVSRKLLP 222
G N +R+F +ME +P+VV + ++ LC ++ ++EA +L++MV R + P
Sbjct: 210 GLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPP 269
Query: 221 DALVYKTVSHALLQAGLPTEAMQVYRSMI 135
D + Y T+ H G EA ++++ M+
Sbjct: 270 DVVTYNTILHGFCSLGQLNEATRLFKEMV 298