BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00031292
         (367 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006306271.1| hypothetical protein CARUB_v10012127mg [Caps...    77   2e-12
gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 ...    76   5e-12
gb|EMT29222.1| hypothetical protein F775_16585 [Aegilops tauschii]     74   2e-11
ref|XP_006662452.1| PREDICTED: pentatricopeptide repeat-containi...    74   3e-11
ref|XP_004245911.1| PREDICTED: pentatricopeptide repeat-containi...    73   3e-11
ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containi...    73   3e-11
tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea m...    73   3e-11
ref|NP_001136745.1| hypothetical protein [Zea mays] gi|194696880...    73   3e-11
ref|XP_003619848.1| CCP [Medicago truncatula] gi|355494863|gb|AE...    73   4e-11
ref|XP_006472193.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
ref|XP_006352876.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
ref|XP_006433532.1| hypothetical protein CICLE_v10003346mg [Citr...    72   6e-11
gb|EMT33585.1| hypothetical protein F775_11798 [Aegilops tauschii]     72   8e-11
ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]               72   1e-10
ref|NP_172694.1| pentatricopeptide repeat-containing protein [Ar...    72   1e-10
ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|XP_002512435.1| pentatricopeptide repeat-containing protein,...    72   1e-10
ref|XP_006450123.1| hypothetical protein CICLE_v10007859mg [Citr...    71   1e-10
ref|XP_006382765.1| hypothetical protein POPTR_0005s05210g [Popu...    71   1e-10

>ref|XP_006306271.1| hypothetical protein CARUB_v10012127mg [Capsella rubella]
           gi|482574982|gb|EOA39169.1| hypothetical protein
           CARUB_v10012127mg [Capsella rubella]
          Length = 549

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5   RGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMN 184
           +G+     T+  L+  +CN G       +L +M+ RN+ P+  T+ T++ CF + G L+ 
Sbjct: 239 KGIKADCITYTTLIGGFCNAGRWNDGAKLLRDMITRNITPNVVTFNTLIDCFVKEGKLLE 298

Query: 185 VLEFHAIIDERELC-DFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTE 361
             E H  +  R +  + + Y  +I+ +C++ RL +A Q+LD+M  +G  PD+    +L +
Sbjct: 299 AEELHKEMITRGIAPNIITYTSLIDGFCKDNRLEEANQMLDRMVSKGCDPDIVTCNILIK 358

Query: 362 GY 367
           GY
Sbjct: 359 GY 360


>gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 35/123 (28%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   DRGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLM 181
           + G P +V TF  L+   C +G   Q + ++  M+     P   T+GT+V   C+ G  +
Sbjct: 3   ETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTV 62

Query: 182 NVLEFHAIIDEREL-CDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLT 358
           + L     +DE ++  + + Y  +++R C++G  IKA  +  +M E+GI P+V  +  + 
Sbjct: 63  SALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMI 122

Query: 359 EGY 367
           +GY
Sbjct: 123 DGY 125



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
 Frame = +2

Query: 2   DRGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLM 181
           ++G+  +V T+  ++  YC+ G       +L +M+ RN+ P   T+  ++  F + G + 
Sbjct: 108 EKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVS 167

Query: 182 NVLEFHAIIDERELC-DFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLT 358
              E +  +  R +    + Y  +I+ +C+  RL  A  + D M  +G  PD+     L 
Sbjct: 168 GAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLI 227

Query: 359 EG 364
           +G
Sbjct: 228 DG 229



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
 Frame = +2

Query: 5   RGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMN 184
           +G+  S  T+  +V  +C Q   ++   M+  M++    P   T+ T+++ +C+ G + +
Sbjct: 365 KGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDD 424

Query: 185 VLEFHAIIDEREL-CDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTE 361
            LE  + + +R L  D + Y  +I  +C+ G L  A  + ++M   G+ PD   F+ +  
Sbjct: 425 GLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLA 484

Query: 362 G 364
           G
Sbjct: 485 G 485



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/121 (22%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
 Frame = +2

Query: 8   GMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMNV 187
           G+   V T+ +L+  +  +G+  +   + +EML + + PS  T+ ++V  FC++  L   
Sbjct: 331 GVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEA 390

Query: 188 LEF-HAIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTEG 364
            +   +++ E    D + +  +I+ YC+ GR+    ++  +M + G++ D   +  L  G
Sbjct: 391 RQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHG 450

Query: 365 Y 367
           +
Sbjct: 451 F 451


>gb|EMT29222.1| hypothetical protein F775_16585 [Aegilops tauschii]
          Length = 502

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 33/122 (27%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
 Frame = +2

Query: 2   DRGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLM 181
           D+G+   + T+  L+ A C +G+ ++ V +L EML   L P   T+  ++  +CE+G++ 
Sbjct: 309 DKGVRADIVTYNTLIGALCCKGEVRKAVKLLDEMLMVGLEPEHRTYNNIINGYCEKGNIK 368

Query: 182 NVLEFHAIIDE-RELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLT 358
           +  E  A +++ R+  + + Y + I+   R G++ +A ++L++M E+G++P+   ++ + 
Sbjct: 369 SAYEIRARMEKGRKRANVVTYNVFIKHLSRMGKMEEANELLNEMLEKGLVPNKVTYETIK 428

Query: 359 EG 364
           EG
Sbjct: 429 EG 430


>ref|XP_006662452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like, partial [Oryza brachyantha]
          Length = 526

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 31/121 (25%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
 Frame = +2

Query: 2   DRGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLM 181
           ++G+   V T+ VL+ A C +G+  + V +L EML   L P+  T+ T+++ FC++G++ 
Sbjct: 381 EKGIEADVVTYNVLIGALCGKGEVPKAVKLLDEMLKVGLEPNHLTYNTIIQGFCDKGNIK 440

Query: 182 NVLEFHAIIDE-RELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLT 358
              E    +++ R+  + + Y ++I+ +C  G++ +A  ++++M ++G++P+   ++ + 
Sbjct: 441 AAYEIRTRMEKFRKRANVVTYNVLIKYFCSLGKMEQADDLINEMLDKGLVPNTITYETIK 500

Query: 359 E 361
           E
Sbjct: 501 E 501



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5   RGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMN 184
           +G+  S + + VL+   C +G  ++ + M+ EM +  L P++ T+G V+  FC++G + N
Sbjct: 242 QGIAASAAIYNVLISGLCGEGRVEEGLKMMKEMEDLGLPPNEITFGRVLNGFCKKGMVAN 301

Query: 185 VLEF-HAIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTE 361
             ++   +++       + Y M+I  Y R G++  A  V + M ++GI P+V  +  L  
Sbjct: 302 AKDWIDGMVERNVQPSVVTYNMLIGGYRRLGKMEDAMAVKEAMAKKGISPNVRTYNCLIT 361

Query: 362 GY 367
           G+
Sbjct: 362 GF 363


>ref|XP_004245911.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Solanum lycopersicum]
          Length = 720

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5   RGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMN 184
           RG P+   T+  L+KA CN G  ++ + +  EM+ +   P+  T   ++  FC  G + N
Sbjct: 552 RGCPLDEITYNGLIKALCNDGAVERALGLFEEMMRKGSKPNHVTCNILINGFCRIGKVQN 611

Query: 185 VLEFHAIIDERELC-DFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTE 361
            LEF   + +R L  D + Y  +I   C  GR+ +A  + +K++ EG+ PD   +  L  
Sbjct: 612 ALEFLRDLIQRGLTPDIVTYNSLINGLCNNGRIREAQNLFEKLELEGVCPDTITYNTLIS 671

Query: 362 GY 367
            Y
Sbjct: 672 SY 673


>ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
           gi|449524964|ref|XP_004169491.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 34/120 (28%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
 Frame = +2

Query: 5   RGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMN 184
           RG+     T+ +L+ A+C + + K+   ++ EML++ L PS  T+  ++  +C  G+L  
Sbjct: 472 RGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRA 531

Query: 185 VLEFHAIID-ERELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTE 361
            L     ++ E    + + Y ++I+ YCR+G+L  A  +L++M E+G+IP+   ++++ E
Sbjct: 532 ALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKE 591



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/122 (25%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5   RGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMN 184
           +G+  +V T+  LV   CN+G   +   +L EML+ NL P+  T+  ++  +C++  L  
Sbjct: 332 QGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEE 391

Query: 185 VLEFHAIIDERELC-DFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTE 361
             E    I ++ L  + + +  ++  YC+ G++ +A  +   M E+G +P+   +  L  
Sbjct: 392 ARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIV 451

Query: 362 GY 367
           G+
Sbjct: 452 GF 453



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/125 (24%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
 Frame = +2

Query: 5   RGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMN 184
           +G+  +V TF  L+  YC  G  ++   +   ML +   P+ +T+  ++  FC  G +  
Sbjct: 402 QGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEE 461

Query: 185 VLEFHAIIDEREL----CDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQL 352
           V     +++E +      D + Y ++I  +C +    KA +++D+M ++G+ P    + +
Sbjct: 462 VKN---LLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNI 518

Query: 353 LTEGY 367
           L  GY
Sbjct: 519 LLNGY 523


>tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 574

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 32/122 (26%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
 Frame = +2

Query: 2   DRGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLM 181
           ++G+   V T+ VL+ A C +G+ ++ V +L EM+   L P    + T++  FCE+G   
Sbjct: 429 EKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQ 488

Query: 182 NVLEFHAIIDER-ELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLT 358
              E    +++R +  + + Y + ++ +C+ G++ +A  VL++M E+G++P+   ++++ 
Sbjct: 489 GAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIIN 548

Query: 359 EG 364
            G
Sbjct: 549 SG 550


>ref|NP_001136745.1| hypothetical protein [Zea mays] gi|194696880|gb|ACF82524.1| unknown
           [Zea mays] gi|414875980|tpg|DAA53111.1| TPA:
           hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 421

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 32/122 (26%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
 Frame = +2

Query: 2   DRGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLM 181
           ++G+   V T+ VL+ A C +G+ ++ V +L EM+   L P    + T++  FCE+G   
Sbjct: 276 EKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQ 335

Query: 182 NVLEFHAIIDER-ELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLT 358
              E    +++R +  + + Y + ++ +C+ G++ +A  VL++M E+G++P+   ++++ 
Sbjct: 336 GAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIIN 395

Query: 359 EG 364
            G
Sbjct: 396 SG 397


>ref|XP_003619848.1| CCP [Medicago truncatula] gi|355494863|gb|AES76066.1| CCP [Medicago
           truncatula]
          Length = 556

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 32/123 (26%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   DRGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLM 181
           D G+   + T+  L++ +C  G   +V  ++ EM+N+N+ P+  T+  ++  FC +G ++
Sbjct: 252 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 311

Query: 182 NVL-EFHAIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLT 358
                F+ ++   +  D + +  +I  +C  G +++A ++ D + E GI+PDV ++ +L 
Sbjct: 312 EAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILI 371

Query: 359 EGY 367
            GY
Sbjct: 372 IGY 374


>ref|XP_006472193.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like isoform X1 [Citrus sinensis]
           gi|568836322|ref|XP_006472194.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09820-like isoform X2 [Citrus sinensis]
          Length = 595

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 34/121 (28%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
 Frame = +2

Query: 2   DRGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLM 181
           + GM   + T+ +LV A C  G +K+ V +L EM    + PS  T+ T++  +C  G+L+
Sbjct: 453 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKVGVSPSHVTYNTLMDGYCREGNLV 512

Query: 182 NVLEFHAIID-ERELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLT 358
             +     ++ E++  + + Y ++I+ +C++G+L  A  +L+++ E+G+IP+   +Q++ 
Sbjct: 513 AAMNLRKQMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 572

Query: 359 E 361
           E
Sbjct: 573 E 573



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
 Frame = +2

Query: 8   GMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMNV 187
           G+   V T+  L+   C  G   + V +  EM+   L P+  T+  ++  FC++  +   
Sbjct: 315 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTYNALINGFCKKKMVEKA 374

Query: 188 LEFHAIIDERELC-DFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTEG 364
                 I E+ L    + Y  +I+ YC+EGR+  A  + + M + G++PDV  +  L  G
Sbjct: 375 RALFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 434


>ref|XP_006352876.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565372595|ref|XP_006352877.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like isoform X2 [Solanum tuberosum]
          Length = 720

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5   RGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMN 184
           RG P+   T+  L+KA CN G  ++ + +  EM+ +   P+  T   ++  FC  G + N
Sbjct: 552 RGCPLDEITYNGLIKALCNDGAVERALGLFEEMMRKGSKPNHVTCNILINGFCRIGKVQN 611

Query: 185 VLEFHAIIDERELC-DFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTE 361
            LEF   +  R L  D + Y  +I   C  GR+ +A  + +K++ EG+ PD   +  L  
Sbjct: 612 ALEFLRDLIHRGLTPDIVTYNSLINGLCNNGRIREAQNLFEKLELEGVCPDTITYNTLIS 671

Query: 362 GY 367
            Y
Sbjct: 672 SY 673


>ref|XP_006433532.1| hypothetical protein CICLE_v10003346mg [Citrus clementina]
           gi|557535654|gb|ESR46772.1| hypothetical protein
           CICLE_v10003346mg [Citrus clementina]
          Length = 596

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 34/121 (28%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
 Frame = +2

Query: 2   DRGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLM 181
           + GM   + T+ +LV A C  G +K+ V +L EM    + PS  T+ T++  +C  G+L+
Sbjct: 454 NNGMRAGLVTYNILVGALCKDGKSKKAVSLLDEMFKVGVSPSHVTYNTLMDGYCREGNLV 513

Query: 182 NVLEFHAIID-ERELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLT 358
             +     ++ E++  + + Y ++I+ +C++G+L  A  +L+++ E+G+IP+   +Q++ 
Sbjct: 514 AAMNLRKQMEKEKKWPNIVTYNVLIKGFCQKGKLEDANGLLNELLEKGLIPNQTTYQIVR 573

Query: 359 E 361
           E
Sbjct: 574 E 574



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
 Frame = +2

Query: 8   GMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMNV 187
           G+   V T+  L+   C  G   + V +  EM+   L P+  T   ++  FC++  +   
Sbjct: 316 GIAAGVVTYNSLINGLCVDGKLDEAVALRDEMMASGLKPNVVTSNALINGFCKKKLVEKA 375

Query: 188 LEFHAIIDERELC-DFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTEG 364
                 I E+ L    + Y  +I+ YC+EGR+  A  + + M + G++PDV  +  L  G
Sbjct: 376 RVLFDDISEQGLSPSVITYNTLIDAYCKEGRMEDAFAMRNSMLDRGVLPDVSTYNCLIAG 435


>gb|EMT33585.1| hypothetical protein F775_11798 [Aegilops tauschii]
          Length = 587

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/123 (27%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   DRGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLM 181
           +RG+P  + TF  L+  YC +G+ ++ + +   ML+  L P   T+ T++   C +G L 
Sbjct: 333 ERGVPPDLCTFTTLIHGYCREGNIEKALQLFETMLHERLTPDIVTYNTLIDGMCRQGDLG 392

Query: 182 NVLEFHAIIDERELC-DFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLT 358
              E    +  RE+  + + Y ++I+ +C +G++  A   LD+M  +GI+P++  +  + 
Sbjct: 393 KANELWDDMHSREIFPNHITYSILIDSHCEKGQVDDAFGFLDEMINKGIVPNIMTYNSII 452

Query: 359 EGY 367
           +GY
Sbjct: 453 KGY 455



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 32/116 (27%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
 Frame = +2

Query: 23  VSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMNVLEF-H 199
           + T+  L+   C QGD  +   +  +M +R +FP+  T+  ++   CE+G + +   F  
Sbjct: 375 IVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHITYSILIDSHCEKGQVDDAFGFLD 434

Query: 200 AIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTEGY 367
            +I++  + + + Y  +I+ YCR G ++K  Q L KM++  ++PD+  +  L  GY
Sbjct: 435 EMINKGIVPNIMTYNSIIKGYCRSGNVLKGQQFLQKMRDAKVLPDLITYNTLIHGY 490



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5   RGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMN 184
           RG+   + +F  L+  +  +G   +    L EM    L P    +  V+  +C  GS++ 
Sbjct: 229 RGVTPDIVSFSCLIGLFARRGKMDRTAAYLREMREFGLMPDGVIYTMVIGGYCRAGSMLE 288

Query: 185 VLEFH-AIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTE 361
            L     ++    L D + Y  ++   C+E RL  A ++L +M+E G+ PD+  F  L  
Sbjct: 289 ALRVRDEMVGRGCLPDVVTYNTLLNGLCKERRLSDAEELLTEMRERGVPPDLCTFTTLIH 348

Query: 362 GY 367
           GY
Sbjct: 349 GY 350



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
 Frame = +2

Query: 8   GMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMNV 187
           G+   V +F +L+  +C   +  + +    EM  R + P   ++  ++  F  RG +   
Sbjct: 195 GVAPDVRSFNMLIGGFCRVKEPDEAMKFYKEMRRRGVTPDIVSFSCLIGLFARRGKMDRT 254

Query: 188 LEFHAIIDERELC-DFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTEG 364
             +   + E  L  D + Y MVI  YCR G +++A +V D+M   G +PDV  +  L  G
Sbjct: 255 AAYLREMREFGLMPDGVIYTMVIGGYCRAGSMLEALRVRDEMVGRGCLPDVVTYNTLLNG 314


>ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 33/123 (26%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   DRGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLM 181
           D+ +   + T+  L+   C QGD  +   +  +M +R +FP+  T+  ++   CE+G + 
Sbjct: 432 DQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVD 491

Query: 182 NVLEF-HAIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLT 358
           N   F   ++++  + + + Y  +I+ YCR G + K  Q L KM+ + ++PD+  +  L 
Sbjct: 492 NAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLI 551

Query: 359 EGY 367
            GY
Sbjct: 552 HGY 554



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/123 (26%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   DRGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLM 181
           +RG+P  + TF  L+  YC  G+ ++ +     + ++ L P   T+ T++   C +G L 
Sbjct: 397 ERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLG 456

Query: 182 NVLEFHAIIDERELC-DFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLT 358
              E    +  RE+  + + Y ++I+ +C +G++  A   LD+M  +GI+P++  +  + 
Sbjct: 457 KANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSII 516

Query: 359 EGY 367
           +GY
Sbjct: 517 KGY 519



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 26/114 (22%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
 Frame = +2

Query: 29  TFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMNVLEF-HAI 205
           T+ +L+ ++C +G        L EM+N+ + P+  T+ ++++ +C  G++    +F   +
Sbjct: 476 TYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKM 535

Query: 206 IDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTEGY 367
             ++ + D + Y  +I  Y +EG++ +A  +L  M+ E + PD   + ++  G+
Sbjct: 536 RHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGF 589



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
 Frame = +2

Query: 23  VSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMNVLE-FH 199
           V T+  L+   C +        +L EM  R + P   T+ T++  +C  G++   L+ F 
Sbjct: 369 VVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFD 428

Query: 200 AIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTEGY 367
            I D+R   D + Y  +I+  CR+G L KA ++ D M    I P+   + +L + +
Sbjct: 429 TISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSH 484



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5   RGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMN 184
           R +   V +F  L+  +  +G+       L EM    L P    +  V+  FC  G ++ 
Sbjct: 293 RRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLE 352

Query: 185 VLEFH-AIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTE 361
            L     ++    L D + Y  ++   C+E RL  A ++L++MKE G+ PD+  F  L  
Sbjct: 353 ALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIH 412

Query: 362 GY 367
           GY
Sbjct: 413 GY 414


>gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5   RGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMN 184
           +G+  ++ T+ +L+  +CN G       +L +M+ R + P+  T+  ++  F + G L  
Sbjct: 390 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 449

Query: 185 VLEFHAIIDERELC-DFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTE 361
             E H  +  R +  D + Y  +I+ +C+E  L KA Q++D M  +G  P++  F +L  
Sbjct: 450 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 509

Query: 362 GY 367
           GY
Sbjct: 510 GY 511


>ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
           gi|110741411|dbj|BAF02254.1| hypothetical protein
           [Arabidopsis thaliana] gi|332190743|gb|AEE28864.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 637

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5   RGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMN 184
           +G+  ++ T+ +L+  +CN G       +L +M+ R + P+  T+  ++  F + G L  
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351

Query: 185 VLEFHAIIDERELC-DFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTE 361
             E H  +  R +  D + Y  +I+ +C+E  L KA Q++D M  +G  P++  F +L  
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411

Query: 362 GY 367
           GY
Sbjct: 412 GY 413


>ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 32/121 (26%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
 Frame = +2

Query: 5   RGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMN 184
           +G+   + T+ VL+ A C +G+ ++ V +L EML   L P   T+ T++  +CE+G++ +
Sbjct: 427 KGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKS 486

Query: 185 VLEFHAIIDE-RELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTE 361
             E    +++ ++  + + Y + I+  CR G++ +  ++L++M E+G++P+   +  + E
Sbjct: 487 AYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKE 546

Query: 362 G 364
           G
Sbjct: 547 G 547


>ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548396|gb|EEF49887.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 546

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 32/112 (28%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
 Frame = +2

Query: 29  TFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMNVLEFHAII 208
           T+ +L+ + CN+G+ K+ + +L EM  + L PS+ T+ T++  +C+ G+L   L   + +
Sbjct: 413 TYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQM 472

Query: 209 DE-RELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTE 361
           ++   L +   Y ++I+ +C++ +L  A  +L++M E+G+IP+   ++++TE
Sbjct: 473 EKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTE 524



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 30/122 (24%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5   RGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMN 184
           +G+  +V+T+ +L+ AYC   + +    +   ML + + P  +T+  ++   C +G L  
Sbjct: 335 QGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEA 394

Query: 185 VLEFHAIIDEREL-CDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTE 361
                + +D + L  D + Y ++I+  C +G + KA ++LD+M  +G+ P    +  + +
Sbjct: 395 ARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMID 454

Query: 362 GY 367
           GY
Sbjct: 455 GY 456


>ref|XP_006450123.1| hypothetical protein CICLE_v10007859mg [Citrus clementina]
           gi|567916236|ref|XP_006450124.1| hypothetical protein
           CICLE_v10007859mg [Citrus clementina]
           gi|568860194|ref|XP_006483611.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g24830-like isoform X1 [Citrus sinensis]
           gi|557553349|gb|ESR63363.1| hypothetical protein
           CICLE_v10007859mg [Citrus clementina]
           gi|557553350|gb|ESR63364.1| hypothetical protein
           CICLE_v10007859mg [Citrus clementina]
          Length = 572

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 30/122 (24%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5   RGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMN 184
           + +   +  + VL+  +C  GD         +ML R   P   T+ T++ C C++G L  
Sbjct: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349

Query: 185 VLEFHAIIDERELC-DFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTE 361
              F+ ++ +  +  D + YK +I+  C  G ++KA + L  M E+ ++P+   + ++ +
Sbjct: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409

Query: 362 GY 367
           GY
Sbjct: 410 GY 411


>ref|XP_006382765.1| hypothetical protein POPTR_0005s05210g [Populus trichocarpa]
           gi|550338133|gb|ERP60562.1| hypothetical protein
           POPTR_0005s05210g [Populus trichocarpa]
          Length = 525

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   DRGMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLM 181
           DRG+P +V T+  +V  +CN G   +   +L EM+ R++ P   T+  +V   C+ G + 
Sbjct: 178 DRGIPPNVITYSSIVHGFCNLGQLNEATRLLKEMVGRDVMPDTVTFTILVDGLCKEGMVS 237

Query: 182 NVLEFHAIIDERELCDFLY-YKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLT 358
                   + E+ +   +Y Y  +I+ YC + ++ +A +V + M  EG  PDV ++ +L 
Sbjct: 238 EAQRVFETMPEKGVEPNIYTYNALIDGYCLQRQMNEAKKVFEIMIHEGCAPDVHSYNILI 297

Query: 359 EGY 367
            GY
Sbjct: 298 NGY 300



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
 Frame = +2

Query: 8   GMPVSVSTFEVLVKAYCNQGDTKQVVPMLIEMLNRNLFPSKATWGTVVRCFCERGSLMNV 187
           G    V T+ +++   C        +  L EML+R + P+  T+ ++V  FC  G L   
Sbjct: 145 GCKPDVVTYSIIIDCLCKDRLVNDAMEFLSEMLDRGIPPNVITYSSIVHGFCNLGQLNEA 204

Query: 188 LE-FHAIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMKEEGIIPDVDAFQLLTEG 364
                 ++    + D + + ++++  C+EG + +A +V + M E+G+ P++  +  L +G
Sbjct: 205 TRLLKEMVGRDVMPDTVTFTILVDGLCKEGMVSEAQRVFETMPEKGVEPNIYTYNALIDG 264

Query: 365 Y 367
           Y
Sbjct: 265 Y 265