BLASTX nr result
ID: Ephedra27_contig00031259
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra27_contig00031259 (371 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI22537.3| unnamed protein product [Vitis vinifera] 61 1e-07 ref|XP_002268106.1| PREDICTED: uncharacterized protein LOC100248... 61 1e-07 emb|CAN79954.1| hypothetical protein VITISV_027426 [Vitis vinifera] 61 1e-07 gb|EOX95734.1| Poly(A) RNA polymerase cid14, putative [Theobroma... 56 4e-06 >emb|CBI22537.3| unnamed protein product [Vitis vinifera] Length = 1359 Score = 61.2 bits (147), Expect = 1e-07 Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 9/125 (7%) Frame = -1 Query: 368 VSKRSQHQIS-STRSQKGTKTDISNADSQDIKG--------ISRVYSSPELTDVTSENNA 216 ++ HQ + ST S + TD + D G +R +SSPELTD +S+ + Sbjct: 470 ITADQNHQTAQSTSSNENIHTDKGRSSRPDYLGNEVHARYQFARTHSSPELTDASSDVPS 529 Query: 215 RGRKGRPETAEAPRNHAVSSRNDQNVAERRRKNVSSDLPTSHILKTTGTNDSVRFRHNSS 36 RGR+ R T+E + V +R+D + RR+N+ S++P H +++ T +S RH SS Sbjct: 530 RGRRNR--TSETGKGQTVPARSDYS----RRRNLGSEVPDYHSARSS-TENSPSSRHGSS 582 Query: 35 HGNVD 21 H ++D Sbjct: 583 HRSID 587 >ref|XP_002268106.1| PREDICTED: uncharacterized protein LOC100248390 [Vitis vinifera] Length = 1353 Score = 61.2 bits (147), Expect = 1e-07 Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 9/125 (7%) Frame = -1 Query: 368 VSKRSQHQIS-STRSQKGTKTDISNADSQDIKG--------ISRVYSSPELTDVTSENNA 216 ++ HQ + ST S + TD + D G +R +SSPELTD +S+ + Sbjct: 470 ITADQNHQTAQSTSSNENIHTDKGRSSRPDYLGNEVHARYQFARTHSSPELTDASSDVPS 529 Query: 215 RGRKGRPETAEAPRNHAVSSRNDQNVAERRRKNVSSDLPTSHILKTTGTNDSVRFRHNSS 36 RGR+ R T+E + V +R+D + RR+N+ S++P H +++ T +S RH SS Sbjct: 530 RGRRNR--TSETGKGQTVPARSDYS----RRRNLGSEVPDYHSARSS-TENSPSSRHGSS 582 Query: 35 HGNVD 21 H ++D Sbjct: 583 HRSID 587 >emb|CAN79954.1| hypothetical protein VITISV_027426 [Vitis vinifera] Length = 1388 Score = 61.2 bits (147), Expect = 1e-07 Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 9/125 (7%) Frame = -1 Query: 368 VSKRSQHQIS-STRSQKGTKTDISNADSQDIKG--------ISRVYSSPELTDVTSENNA 216 ++ HQ + ST S + TD + D G +R +SSPELTD +S+ + Sbjct: 439 ITADQNHQTAQSTSSNENIHTDKGRSSRPDYLGNEVHARYQFARTHSSPELTDASSDVPS 498 Query: 215 RGRKGRPETAEAPRNHAVSSRNDQNVAERRRKNVSSDLPTSHILKTTGTNDSVRFRHNSS 36 RGR+ R T+E + V +R+D + RR+N+ S++P H +++ T +S RH SS Sbjct: 499 RGRRNR--TSETGKGQTVPARSDYS----RRRNLGSEVPDYHSARSS-TENSPSSRHGSS 551 Query: 35 HGNVD 21 H ++D Sbjct: 552 HRSID 556 >gb|EOX95734.1| Poly(A) RNA polymerase cid14, putative [Theobroma cacao] Length = 1347 Score = 56.2 bits (134), Expect = 4e-06 Identities = 36/112 (32%), Positives = 58/112 (51%) Frame = -1 Query: 356 SQHQISSTRSQKGTKTDISNADSQDIKGISRVYSSPELTDVTSENNARGRKGRPETAEAP 177 S + + Q+ +K + D Q +R SSPELT+ E +RGR+ R E+ Sbjct: 476 SNQNVHNDTGQRNSKAENIVTDVQGRYLFARTRSSPELTETYGEVASRGRRNR--VPESG 533 Query: 176 RNHAVSSRNDQNVAERRRKNVSSDLPTSHILKTTGTNDSVRFRHNSSHGNVD 21 + H S R+D N RKN+ SD+ S+ +K++ +D RH S+H ++D Sbjct: 534 KTHIASMRSDNN----GRKNMESDMTASNNIKSS-CDDPSSIRHTSTHQSID 580