BLASTX nr result
ID: Ephedra27_contig00031224
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra27_contig00031224 (361 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_188346.2| E3 ubiquitin-protein ligase UPL6 [Arabidopsis t... 58 2e-07 ref|NP_001118648.1| E3 ubiquitin-protein ligase UPL6 [Arabidopsi... 58 2e-07 dbj|BAB02722.1| unnamed protein product [Arabidopsis thaliana] 58 2e-07 gb|ABR16239.1| unknown [Picea sitchensis] 53 7e-07 ref|XP_002883053.1| hypothetical protein ARALYDRAFT_479191 [Arab... 55 1e-06 ref|XP_006296888.1| hypothetical protein CARUB_v10012881mg [Caps... 55 2e-06 ref|XP_003550723.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-... 50 3e-06 ref|XP_006841610.1| hypothetical protein AMTR_s00003p00213880 [A... 50 3e-06 ref|XP_006600390.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-... 50 3e-06 >ref|NP_188346.2| E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] gi|334185408|ref|NP_001189915.1| E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] gi|75247591|sp|Q8RWB8.1|UPL6_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL6; Short=Ubiquitin-protein ligase 6 gi|20260606|gb|AAM13201.1| unknown protein [Arabidopsis thaliana] gi|37202000|gb|AAQ89615.1| At3g17205 [Arabidopsis thaliana] gi|332642397|gb|AEE75918.1| E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] gi|332642399|gb|AEE75920.1| E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] Length = 1029 Score = 57.8 bits (138), Expect(2) = 2e-07 Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 11/102 (10%) Frame = +1 Query: 4 IYQRIVGKLDYDRFYKEQDLISLQDMKLLVKILKEKM-----VNVIIFARSGGSVNRDIS 168 +Y+ ++ +D + FY+ + +SLQD++LL+ ILK+ + VN + +G SV+ D+S Sbjct: 510 VYKHMLMIVDNEEFYEREKPLSLQDIRLLIIILKQALWQLLWVNPLTQPNTGKSVSNDLS 569 Query: 169 Q------IQWIILFYVSYVLHKLLAWNCRKQYTSPDDFCATS 276 + IQ + VS +L +L WN RKQ+TS DF A S Sbjct: 570 KKNPIELIQNRMGIVVSELLSQLQDWNNRKQFTSSSDFQADS 611 Score = 22.7 bits (47), Expect(2) = 2e-07 Identities = 8/14 (57%), Positives = 12/14 (85%) Frame = +2 Query: 320 LMKYAPFLIPFSTR 361 ++ APFLIPF++R Sbjct: 630 ILMQAPFLIPFTSR 643 >ref|NP_001118648.1| E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] gi|332642398|gb|AEE75919.1| E3 ubiquitin-protein ligase UPL6 [Arabidopsis thaliana] Length = 1015 Score = 57.8 bits (138), Expect(2) = 2e-07 Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 11/102 (10%) Frame = +1 Query: 4 IYQRIVGKLDYDRFYKEQDLISLQDMKLLVKILKEKM-----VNVIIFARSGGSVNRDIS 168 +Y+ ++ +D + FY+ + +SLQD++LL+ ILK+ + VN + +G SV+ D+S Sbjct: 496 VYKHMLMIVDNEEFYEREKPLSLQDIRLLIIILKQALWQLLWVNPLTQPNTGKSVSNDLS 555 Query: 169 Q------IQWIILFYVSYVLHKLLAWNCRKQYTSPDDFCATS 276 + IQ + VS +L +L WN RKQ+TS DF A S Sbjct: 556 KKNPIELIQNRMGIVVSELLSQLQDWNNRKQFTSSSDFQADS 597 Score = 22.7 bits (47), Expect(2) = 2e-07 Identities = 8/14 (57%), Positives = 12/14 (85%) Frame = +2 Query: 320 LMKYAPFLIPFSTR 361 ++ APFLIPF++R Sbjct: 616 ILMQAPFLIPFTSR 629 >dbj|BAB02722.1| unnamed protein product [Arabidopsis thaliana] Length = 963 Score = 57.8 bits (138), Expect(2) = 2e-07 Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 11/102 (10%) Frame = +1 Query: 4 IYQRIVGKLDYDRFYKEQDLISLQDMKLLVKILKEKM-----VNVIIFARSGGSVNRDIS 168 +Y+ ++ +D + FY+ + +SLQD++LL+ ILK+ + VN + +G SV+ D+S Sbjct: 449 VYKHMLMIVDNEEFYEREKPLSLQDIRLLIIILKQALWQLLWVNPLTQPNTGKSVSNDLS 508 Query: 169 Q------IQWIILFYVSYVLHKLLAWNCRKQYTSPDDFCATS 276 + IQ + VS +L +L WN RKQ+TS DF A S Sbjct: 509 KKNPIELIQNRMGIVVSELLSQLQDWNNRKQFTSSSDFQADS 550 Score = 22.7 bits (47), Expect(2) = 2e-07 Identities = 8/14 (57%), Positives = 12/14 (85%) Frame = +2 Query: 320 LMKYAPFLIPFSTR 361 ++ APFLIPF++R Sbjct: 569 ILMQAPFLIPFTSR 582 >gb|ABR16239.1| unknown [Picea sitchensis] Length = 1032 Score = 53.1 bits (126), Expect(2) = 7e-07 Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 12/101 (11%) Frame = +1 Query: 4 IYQRIVGKLDYDRFYKEQDLISLQDMKLLVKILKEKMVNVIIF-----------ARSGGS 150 +Y+ ++ +D + FY++Q +SLQD+K LV ILKE + ++ SG + Sbjct: 510 LYRHMLMIIDNEEFYEQQKPLSLQDVKALVIILKEALWQLLWVIPSKTSTPQKPVHSGSN 569 Query: 151 VNR-DISQIQWIILFYVSYVLHKLLAWNCRKQYTSPDDFCA 270 R + I+ + + +L +L WNCR+++TSP+DF A Sbjct: 570 QKRFPLQSIRERVSTLAAELLAQLQDWNCRREFTSPNDFHA 610 Score = 25.4 bits (54), Expect(2) = 7e-07 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = +2 Query: 308 RSVPLMKYAPFLIPFSTR 361 R+ L+K APFL+PF+ R Sbjct: 628 RAHELLKRAPFLVPFTNR 645 >ref|XP_002883053.1| hypothetical protein ARALYDRAFT_479191 [Arabidopsis lyrata subsp. lyrata] gi|297328893|gb|EFH59312.1| hypothetical protein ARALYDRAFT_479191 [Arabidopsis lyrata subsp. lyrata] Length = 1029 Score = 55.5 bits (132), Expect(2) = 1e-06 Identities = 35/100 (35%), Positives = 59/100 (59%), Gaps = 11/100 (11%) Frame = +1 Query: 4 IYQRIVGKLDYDRFYKEQDLISLQDMKLLVKILKEKM-----VNVIIFARSGGSVNRDIS 168 +Y+ ++ +D + FY+ + +SLQD++LL+ ILK+ + VN + +G SV+ D+S Sbjct: 510 VYKHMLMIVDNEEFYEREKPLSLQDIRLLIIILKQALWQLLWVNPLTQPNTGKSVSNDLS 569 Query: 169 Q------IQWIILFYVSYVLHKLLAWNCRKQYTSPDDFCA 270 + IQ + VS +L +L WN R+Q+TS DF A Sbjct: 570 KKNPVELIQNRVGVVVSELLSQLQDWNNRQQFTSSSDFQA 609 Score = 22.7 bits (47), Expect(2) = 1e-06 Identities = 8/14 (57%), Positives = 12/14 (85%) Frame = +2 Query: 320 LMKYAPFLIPFSTR 361 ++ APFLIPF++R Sbjct: 630 ILMQAPFLIPFTSR 643 >ref|XP_006296888.1| hypothetical protein CARUB_v10012881mg [Capsella rubella] gi|482565597|gb|EOA29786.1| hypothetical protein CARUB_v10012881mg [Capsella rubella] Length = 1029 Score = 54.7 bits (130), Expect(2) = 2e-06 Identities = 34/100 (34%), Positives = 60/100 (60%), Gaps = 11/100 (11%) Frame = +1 Query: 4 IYQRIVGKLDYDRFYKEQDLISLQDMKLLVKILKEKM-----VNVIIFARSGGSVNRDIS 168 +Y+ ++ +D + FY+ + +SLQD++LL+ ILK+ + VN + + +G SV+ D+S Sbjct: 510 VYKHMLMIVDNEEFYEREKPLSLQDIRLLIIILKQALWQLLWVNPLTQSNTGKSVSNDLS 569 Query: 169 Q------IQWIILFYVSYVLHKLLAWNCRKQYTSPDDFCA 270 + IQ + VS +L +L WN R+++TS DF A Sbjct: 570 KKNPVELIQNRVGVVVSELLSQLQDWNNRQEFTSSTDFQA 609 Score = 22.7 bits (47), Expect(2) = 2e-06 Identities = 8/14 (57%), Positives = 12/14 (85%) Frame = +2 Query: 320 LMKYAPFLIPFSTR 361 ++ APFLIPF++R Sbjct: 630 ILMQAPFLIPFTSR 643 >ref|XP_003550723.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-like isoformX1 [Glycine max] Length = 1026 Score = 50.4 bits (119), Expect(2) = 3e-06 Identities = 32/101 (31%), Positives = 57/101 (56%), Gaps = 12/101 (11%) Frame = +1 Query: 4 IYQRIVGKLDYDRFYKEQDLISLQDMKLLVKILKEKM-----VNVIIFARSGGSV----- 153 +Y+ ++ +D + FY+++ +SL+D++ L+ IL++ + VN I A S SV Sbjct: 506 VYKHMLMIVDNEEFYEQEKPLSLKDIRSLIIILRQVLWQLLWVNHITSANSVKSVPVSSA 565 Query: 154 --NRDISQIQWIILFYVSYVLHKLLAWNCRKQYTSPDDFCA 270 + + IQ + VS +L +L WN R+Q+TSP +F A Sbjct: 566 SKGQSVQTIQQRVCIVVSELLSQLQDWNNRRQFTSPSNFHA 606 Score = 25.8 bits (55), Expect(2) = 3e-06 Identities = 10/18 (55%), Positives = 15/18 (83%) Frame = +2 Query: 308 RSVPLMKYAPFLIPFSTR 361 R+ ++K APFLIPF++R Sbjct: 623 RANEILKQAPFLIPFTSR 640 >ref|XP_006841610.1| hypothetical protein AMTR_s00003p00213880 [Amborella trichopoda] gi|548843631|gb|ERN03285.1| hypothetical protein AMTR_s00003p00213880 [Amborella trichopoda] Length = 1021 Score = 49.7 bits (117), Expect(2) = 3e-06 Identities = 30/101 (29%), Positives = 59/101 (58%), Gaps = 12/101 (11%) Frame = +1 Query: 4 IYQRIVGKLDYDRFYKEQDLISLQDMKLLVKILKE-----------KMVNVIIFARSGGS 150 +Y+ ++ +D + FY+++ +SLQD+++L+ LKE K+ +++ A++ + Sbjct: 510 VYRHMLMIIDNEEFYEQERPLSLQDIRVLITFLKEALWQLLWVSPGKLPSLLKAAKNISN 569 Query: 151 VNR-DISQIQWIILFYVSYVLHKLLAWNCRKQYTSPDDFCA 270 + R + IQ + S +L +L WN R+Q+TSP+DF A Sbjct: 570 LRRLSVQFIQHKVSGGTSELLAQLQDWNNRRQFTSPNDFHA 610 Score = 26.6 bits (57), Expect(2) = 3e-06 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +2 Query: 299 KCRRSVPLMKYAPFLIPFSTR 361 K R+ L+K APFL+PF++R Sbjct: 625 KNTRARDLLKQAPFLVPFTSR 645 >ref|XP_006600390.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-like isoform X2 [Glycine max] Length = 1020 Score = 50.4 bits (119), Expect(2) = 3e-06 Identities = 32/101 (31%), Positives = 57/101 (56%), Gaps = 12/101 (11%) Frame = +1 Query: 4 IYQRIVGKLDYDRFYKEQDLISLQDMKLLVKILKEKM-----VNVIIFARSGGSV----- 153 +Y+ ++ +D + FY+++ +SL+D++ L+ IL++ + VN I A S SV Sbjct: 506 VYKHMLMIVDNEEFYEQEKPLSLKDIRSLIIILRQVLWQLLWVNHITSANSVKSVPVSSA 565 Query: 154 --NRDISQIQWIILFYVSYVLHKLLAWNCRKQYTSPDDFCA 270 + + IQ + VS +L +L WN R+Q+TSP +F A Sbjct: 566 SKGQSVQTIQQRVCIVVSELLSQLQDWNNRRQFTSPSNFHA 606 Score = 25.8 bits (55), Expect(2) = 3e-06 Identities = 10/18 (55%), Positives = 15/18 (83%) Frame = +2 Query: 308 RSVPLMKYAPFLIPFSTR 361 R+ ++K APFLIPF++R Sbjct: 623 RANEILKQAPFLIPFTSR 640