BLASTX nr result

ID: Ephedra27_contig00031182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00031182
         (538 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACH59305.1| replication protein [Pseudotsuga menziesii] gi|19...    43   4e-07
gb|ACH59316.1| replication protein [Pseudotsuga menziesii]             42   9e-07
ref|XP_006287282.1| hypothetical protein CARUB_v10000503mg [Caps...    42   4e-06
ref|XP_006399289.1| hypothetical protein EUTSA_v10013014mg [Eutr...    42   4e-06
ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arab...    42   6e-06

>gb|ACH59305.1| replication protein [Pseudotsuga menziesii]
           gi|197305910|gb|ACH59306.1| replication protein
           [Pseudotsuga menziesii] gi|197305912|gb|ACH59307.1|
           replication protein [Pseudotsuga menziesii]
           gi|197305914|gb|ACH59308.1| replication protein
           [Pseudotsuga menziesii] gi|197305916|gb|ACH59309.1|
           replication protein [Pseudotsuga menziesii]
           gi|197305918|gb|ACH59310.1| replication protein
           [Pseudotsuga menziesii] gi|197305920|gb|ACH59311.1|
           replication protein [Pseudotsuga menziesii]
           gi|197305922|gb|ACH59312.1| replication protein
           [Pseudotsuga menziesii] gi|197305924|gb|ACH59313.1|
           replication protein [Pseudotsuga menziesii]
           gi|197305926|gb|ACH59314.1| replication protein
           [Pseudotsuga menziesii] gi|197305928|gb|ACH59315.1|
           replication protein [Pseudotsuga menziesii]
           gi|197305932|gb|ACH59317.1| replication protein
           [Pseudotsuga menziesii] gi|197305934|gb|ACH59318.1|
           replication protein [Pseudotsuga menziesii]
           gi|197305936|gb|ACH59319.1| replication protein
           [Pseudotsuga menziesii] gi|197305938|gb|ACH59320.1|
           replication protein [Pseudotsuga menziesii]
           gi|197305940|gb|ACH59321.1| replication protein
           [Pseudotsuga menziesii] gi|197305942|gb|ACH59322.1|
           replication protein [Pseudotsuga menziesii]
           gi|197305944|gb|ACH59323.1| replication protein
           [Pseudotsuga menziesii] gi|197305946|gb|ACH59324.1|
           replication protein [Pseudotsuga menziesii]
           gi|197305948|gb|ACH59325.1| replication protein
           [Pseudotsuga menziesii] gi|197305950|gb|ACH59326.1|
           replication protein [Pseudotsuga menziesii]
           gi|197305952|gb|ACH59327.1| replication protein
           [Pseudotsuga macrocarpa]
          Length = 67

 Score = 43.1 bits (100), Expect(2) = 4e-07
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +1

Query: 391 QKGTEEMISSYWCEGCQ*HESECSL 465
           +K TEE+ S YWCEGCQ HE+EC+L
Sbjct: 43  RKVTEEIGSGYWCEGCQKHETECNL 67



 Score = 36.6 bits (83), Expect(2) = 4e-07
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +2

Query: 290 AVGGIMLAFLNGRVHISFIILDQLIWYIYYKTCNKR 397
           +VG    A+ N RV+ISFI  DQ +WY   KTCN++
Sbjct: 9   SVGEGKPAYFNVRVYISFIKPDQPMWYRACKTCNRK 44


>gb|ACH59316.1| replication protein [Pseudotsuga menziesii]
          Length = 67

 Score = 42.0 bits (97), Expect(2) = 9e-07
 Identities = 16/25 (64%), Positives = 21/25 (84%)
 Frame = +1

Query: 391 QKGTEEMISSYWCEGCQ*HESECSL 465
           +K TEE+ S YWCEGCQ HE+EC++
Sbjct: 43  RKVTEEIGSGYWCEGCQKHETECNV 67



 Score = 36.6 bits (83), Expect(2) = 9e-07
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +2

Query: 290 AVGGIMLAFLNGRVHISFIILDQLIWYIYYKTCNKR 397
           +VG    A+ N RV+ISFI  DQ +WY   KTCN++
Sbjct: 9   SVGEGKPAYFNVRVYISFIKPDQPMWYRACKTCNRK 44


>ref|XP_006287282.1| hypothetical protein CARUB_v10000503mg [Capsella rubella]
           gi|482555988|gb|EOA20180.1| hypothetical protein
           CARUB_v10000503mg [Capsella rubella]
          Length = 607

 Score = 41.6 bits (96), Expect(2) = 4e-06
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = +1

Query: 391 QKGTEEMISSYWCEGCQ*HESECSLRRI 474
           +K TE M S YWCEGCQ  + ECSLR I
Sbjct: 476 KKVTEAMDSGYWCEGCQKKDQECSLRYI 503



 Score = 34.7 bits (78), Expect(2) = 4e-06
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +2

Query: 314 FLNGRVHISFIILDQLIWYIYYKTCNKR 397
           F + R +ISFI  DQ +WY   KTCNK+
Sbjct: 450 FFSTRAYISFIKPDQTMWYRACKTCNKK 477


>ref|XP_006399289.1| hypothetical protein EUTSA_v10013014mg [Eutrema salsugineum]
           gi|557100379|gb|ESQ40742.1| hypothetical protein
           EUTSA_v10013014mg [Eutrema salsugineum]
          Length = 605

 Score = 41.6 bits (96), Expect(2) = 4e-06
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = +1

Query: 391 QKGTEEMISSYWCEGCQ*HESECSLRRI 474
           +K TE M S YWCEGCQ  + ECSLR I
Sbjct: 473 KKVTEAMDSGYWCEGCQKKDEECSLRYI 500



 Score = 34.7 bits (78), Expect(2) = 4e-06
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +2

Query: 314 FLNGRVHISFIILDQLIWYIYYKTCNKR 397
           F + R +ISFI  DQ +WY   KTCNK+
Sbjct: 447 FFSTRAYISFIKPDQTMWYRACKTCNKK 474


>ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arabidopsis lyrata subsp.
           lyrata] gi|297317139|gb|EFH47561.1| hypothetical protein
           ARALYDRAFT_325405 [Arabidopsis lyrata subsp. lyrata]
          Length = 604

 Score = 41.6 bits (96), Expect(2) = 6e-06
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = +1

Query: 391 QKGTEEMISSYWCEGCQ*HESECSLRRI 474
           +K TE M S YWCEGCQ  + ECSLR I
Sbjct: 473 KKVTEAMDSGYWCEGCQKKDQECSLRYI 500



 Score = 33.9 bits (76), Expect(2) = 6e-06
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +2

Query: 314 FLNGRVHISFIILDQLIWYIYYKTCNKR 397
           F + R +ISFI  DQ +WY   KTCNK+
Sbjct: 447 FFSIRAYISFIKPDQTMWYRACKTCNKK 474


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