BLASTX nr result
ID: Ephedra27_contig00030976
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00030976
(453 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003560510.1| PREDICTED: probable RNA-dependent RNA polyme... 191 8e-47
ref|XP_003579930.1| PREDICTED: probable RNA-dependent RNA polyme... 191 1e-46
ref|XP_002446635.1| hypothetical protein SORBIDRAFT_06g019330 [S... 191 1e-46
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 190 2e-46
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 189 2e-46
gb|EMT07612.1| hypothetical protein F775_11614 [Aegilops tauschii] 189 2e-46
gb|EMT05613.1| hypothetical protein F775_19527 [Aegilops tauschii] 189 2e-46
dbj|BAJ85295.1| predicted protein [Hordeum vulgare subsp. vulgare] 189 4e-46
gb|EMS53588.1| putative RNA-dependent RNA polymerase 2 [Triticum... 188 7e-46
gb|ACR38600.1| unknown [Zea mays] 188 7e-46
ref|NP_001183867.1| RNA-dependent DNA polymerase [Zea mays] gi|8... 188 7e-46
ref|XP_004978058.1| PREDICTED: probable RNA-dependent RNA polyme... 186 4e-45
sp|Q7XM31.1|RDR2_ORYSJ RecName: Full=Probable RNA-dependent RNA ... 185 5e-45
gb|EEE61147.1| hypothetical protein OsJ_15104 [Oryza sativa Japo... 185 5e-45
gb|EAY94464.1| hypothetical protein OsI_16234 [Oryza sativa Indi... 185 5e-45
ref|NP_001053027.1| Os04g0465700 [Oryza sativa Japonica Group] g... 185 5e-45
ref|XP_006653498.1| PREDICTED: probable RNA-dependent RNA polyme... 185 6e-45
gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis] 184 8e-45
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 184 8e-45
ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutr... 184 1e-44
>ref|XP_003560510.1| PREDICTED: probable RNA-dependent RNA polymerase 2-like [Brachypodium
distachyon]
Length = 1138
Score = 191 bits (485), Expect = 8e-47
Identities = 88/141 (62%), Positives = 112/141 (79%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDLYF++WD+RLIP D MD P ++H VT+EE+Q++ VNYML+D+LG ISN
Sbjct: 821 LDGDLYFVTWDDRLIPEKADTPMDYTAARPRIMDHVVTLEEIQQHVVNYMLSDSLGAISN 880
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH +HAD++P+KARSP+CL LA L AVDFAKTG PAE+P SL P+E+PDFME+ D+PM
Sbjct: 881 AHLIHADRDPMKARSPECLRLAALHSMAVDFAKTGAPAELPRSLRPREFPDFMERWDKPM 940
Query: 362 YISTGILGKLYRAAKDRLSEN 424
YISTG+LGKLYRAA R+ +
Sbjct: 941 YISTGVLGKLYRAAVSRMESS 961
>ref|XP_003579930.1| PREDICTED: probable RNA-dependent RNA polymerase 2-like [Brachypodium
distachyon]
Length = 1140
Score = 191 bits (484), Expect = 1e-46
Identities = 87/141 (61%), Positives = 113/141 (80%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDLYF++WD++LIP DA MD P ++H VT+EE+Q++ VNYML+D+LG ISN
Sbjct: 824 LDGDLYFVTWDDKLIPEKADAPMDYTGARPRIMDHVVTLEEIQQHVVNYMLSDSLGAISN 883
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH +HAD++P+KARSP+CL+LA L AVDFAKTG PAE+P SL P+E+PDFME+ D+PM
Sbjct: 884 AHLIHADRDPMKARSPECLQLAALHSMAVDFAKTGAPAELPRSLRPREFPDFMERWDKPM 943
Query: 362 YISTGILGKLYRAAKDRLSEN 424
YIS G+LGKLYRAA R+ +
Sbjct: 944 YISNGVLGKLYRAAVSRMESS 964
>ref|XP_002446635.1| hypothetical protein SORBIDRAFT_06g019330 [Sorghum bicolor]
gi|241937818|gb|EES10963.1| hypothetical protein
SORBIDRAFT_06g019330 [Sorghum bicolor]
Length = 1128
Score = 191 bits (484), Expect = 1e-46
Identities = 90/146 (61%), Positives = 117/146 (80%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDL+FI+WD++LIP DA MD P ++H+VT+EE+Q++FVNYM+ND LG+IS
Sbjct: 826 LDGDLFFITWDDKLIPEKVDAPMDYTATRPRIMDHAVTLEEIQKHFVNYMINDALGVIST 885
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH +HAD+ PLKARSP+CL+LA L AVDFAKTG PAEMP +L P+E+PDFME+ +RPM
Sbjct: 886 AHLIHADRNPLKARSPECLQLAALHSMAVDFAKTGAPAEMPVALRPREFPDFMERWERPM 945
Query: 362 YISTGILGKLYRAAKDRLSENKKAVI 439
Y+ST +LGKLYRAA R EN +A++
Sbjct: 946 YVSTSVLGKLYRAAL-RHEENAEALL 970
>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
2 [Cucumis sativus]
Length = 1117
Score = 190 bits (482), Expect = 2e-46
Identities = 90/146 (61%), Positives = 111/146 (76%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDLYFISWDE LIPP +A MD R P ++H V +EE+Q++FV+YM+NDTLG IS
Sbjct: 823 LDGDLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAIST 882
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH VHAD+EP KA S KCLELA L AVDFAKTG PAEMP L P+E+PDFME+ D+PM
Sbjct: 883 AHLVHADREPKKALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPM 942
Query: 362 YISTGILGKLYRAAKDRLSENKKAVI 439
YIS+ +LGKLYRAA + + + ++
Sbjct: 943 YISSNVLGKLYRAAVKSIEQERSRLV 968
>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cicer arietinum]
Length = 1122
Score = 189 bits (481), Expect = 2e-46
Identities = 89/146 (60%), Positives = 113/146 (77%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDL+FISWD+ LIPP D MD R P ++H VT+EE+ ++FV+YM+NDTLG IS
Sbjct: 829 LDGDLFFISWDKDLIPPQTDNPMDYTGRRPRIMDHKVTLEEIHQFFVDYMINDTLGAIST 888
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH VHAD+EP KARS KCLELA+L AVDFAKTG PAEMP +L P+E+PDFME+ D+PM
Sbjct: 889 AHLVHADREPEKARSRKCLELAELHSMAVDFAKTGAPAEMPRALKPREFPDFMERFDKPM 948
Query: 362 YISTGILGKLYRAAKDRLSENKKAVI 439
YIS G+LGKLYRA + ++ + ++
Sbjct: 949 YISNGVLGKLYRALVESTTQVRSNIV 974
>gb|EMT07612.1| hypothetical protein F775_11614 [Aegilops tauschii]
Length = 1160
Score = 189 bits (481), Expect = 2e-46
Identities = 89/141 (63%), Positives = 111/141 (78%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDLYFI+WDE+LIP D+ MD P ++H VT+EE+Q+YFV+YM+ND+LG IS
Sbjct: 852 LDGDLYFITWDEKLIPEKVDSPMDYTAARPRIMDHVVTLEEIQKYFVDYMINDSLGAIST 911
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH VHAD+ P+KARSP+CL+LA L AVDFAK+G PAEMP SL P+EYPDFME+ D+PM
Sbjct: 912 AHLVHADRHPMKARSPECLQLAALHSMAVDFAKSGAPAEMPRSLRPREYPDFMERWDKPM 971
Query: 362 YISTGILGKLYRAAKDRLSEN 424
YIS G LGKLYRAA ++ +
Sbjct: 972 YISNGALGKLYRAAASQMQSS 992
>gb|EMT05613.1| hypothetical protein F775_19527 [Aegilops tauschii]
Length = 897
Score = 189 bits (481), Expect = 2e-46
Identities = 90/138 (65%), Positives = 109/138 (78%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDLYFI+WDE+LIP D+ MD P ++H VT+EE+Q+YFV+YM+ND+LG IS
Sbjct: 599 LDGDLYFITWDEKLIPEEVDSPMDYTAARPRIMDHVVTLEEIQKYFVDYMINDSLGAIST 658
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH VHAD+ P+KARSP+CL+LA L AVDFAK+G PAEMP SL PKEYPDFME+ D+P
Sbjct: 659 AHLVHADRHPMKARSPECLQLAALHSMAVDFAKSGAPAEMPRSLRPKEYPDFMERWDKPT 718
Query: 362 YISTGILGKLYRAAKDRL 415
YIS G LGKLYRAA R+
Sbjct: 719 YISNGALGKLYRAAASRM 736
>dbj|BAJ85295.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1127
Score = 189 bits (479), Expect = 4e-46
Identities = 90/138 (65%), Positives = 109/138 (78%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDLYFI+WDE+LIP D+ MD P ++H VT+EE+Q+YFV+YM+ND+LG IS
Sbjct: 829 LDGDLYFITWDEKLIPEKVDSPMDYTAARPRIMDHVVTLEEIQKYFVDYMINDSLGAIST 888
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH VHAD+ P+KARSP+CL+LA L AVDFAK+G PAEMP SL PKEYPDFME+ D+P
Sbjct: 889 AHLVHADRHPMKARSPECLQLAALHSMAVDFAKSGAPAEMPRSLRPKEYPDFMERWDKPT 948
Query: 362 YISTGILGKLYRAAKDRL 415
YIS G LGKLYRAA R+
Sbjct: 949 YISNGPLGKLYRAAASRM 966
>gb|EMS53588.1| putative RNA-dependent RNA polymerase 2 [Triticum urartu]
Length = 1089
Score = 188 bits (477), Expect = 7e-46
Identities = 90/138 (65%), Positives = 108/138 (78%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDLYFI+WDE+LIP D+ MD P ++H VT+EE+Q+YFV+YM+ND+LG IS
Sbjct: 791 LDGDLYFITWDEKLIPEKVDSPMDYTAARPRIMDHVVTLEEIQKYFVDYMINDSLGAIST 850
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH VHAD+ P+KARSP+CL+LA L AVDFAKTG PAEMP SL KEYPDFME+ D+P
Sbjct: 851 AHLVHADRHPMKARSPECLQLAALHSMAVDFAKTGAPAEMPRSLRAKEYPDFMERWDKPT 910
Query: 362 YISTGILGKLYRAAKDRL 415
YIS G LGKLYRAA R+
Sbjct: 911 YISNGALGKLYRAAASRM 928
>gb|ACR38600.1| unknown [Zea mays]
Length = 525
Score = 188 bits (477), Expect = 7e-46
Identities = 88/146 (60%), Positives = 118/146 (80%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDL+FI+WD++LIP DA MD P ++H+VT+EE+Q++FV+YM+NDTLG IS
Sbjct: 223 LDGDLFFITWDDKLIPEKVDAPMDYTATRPRIMDHAVTLEEIQKHFVSYMINDTLGAIST 282
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH +HAD++PLKARSP+C++LA L AVDFAKTG PAEMP +L P+E+PDFME+ +RPM
Sbjct: 283 AHLIHADRDPLKARSPECVQLAALHSMAVDFAKTGAPAEMPLALRPREFPDFMERWERPM 342
Query: 362 YISTGILGKLYRAAKDRLSENKKAVI 439
Y+S G+LGKLYRAA R E+ +A++
Sbjct: 343 YVSNGVLGKLYRAAL-RHEEDAEALL 367
>ref|NP_001183867.1| RNA-dependent DNA polymerase [Zea mays] gi|89473792|gb|ABD72708.1|
RNA-dependent RNA polymerase [Zea mays]
gi|374257933|gb|AEZ01781.1| RNA-dependent DNA polymerase
[Zea mays] gi|414586834|tpg|DAA37405.1| TPA: mediator of
paramutation1 [Zea mays]
Length = 1127
Score = 188 bits (477), Expect = 7e-46
Identities = 88/146 (60%), Positives = 118/146 (80%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDL+FI+WD++LIP DA MD P ++H+VT+EE+Q++FV+YM+NDTLG IS
Sbjct: 825 LDGDLFFITWDDKLIPEKVDAPMDYTATRPRIMDHAVTLEEIQKHFVSYMINDTLGAIST 884
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH +HAD++PLKARSP+C++LA L AVDFAKTG PAEMP +L P+E+PDFME+ +RPM
Sbjct: 885 AHLIHADRDPLKARSPECVQLAALHSMAVDFAKTGAPAEMPLALRPREFPDFMERWERPM 944
Query: 362 YISTGILGKLYRAAKDRLSENKKAVI 439
Y+S G+LGKLYRAA R E+ +A++
Sbjct: 945 YVSNGVLGKLYRAAL-RHEEDAEALL 969
>ref|XP_004978058.1| PREDICTED: probable RNA-dependent RNA polymerase 2-like [Setaria
italica]
Length = 1130
Score = 186 bits (471), Expect = 4e-45
Identities = 87/146 (59%), Positives = 117/146 (80%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDL+FI+WD++LIP DA MD P ++H VT+EE+Q++FV+YM+ND LG+IS
Sbjct: 828 LDGDLFFITWDDKLIPEKVDAPMDYTATRPRIMDHVVTLEEIQKHFVSYMINDALGVIST 887
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH +HAD+ PLKARSP+CL+LA L AVDFAKTG PAEMP +L P+E+PDFME+ ++PM
Sbjct: 888 AHLIHADRNPLKARSPECLQLAALHSMAVDFAKTGAPAEMPRALRPREFPDFMERWEKPM 947
Query: 362 YISTGILGKLYRAAKDRLSENKKAVI 439
Y+S G+LGKLYR+A R +EN +A++
Sbjct: 948 YVSNGVLGKLYRSAL-RHAENAEALL 972
>sp|Q7XM31.1|RDR2_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase 2; Short=OsRDR2
gi|32492169|emb|CAE04828.1| OSJNBb0048E02.13 [Oryza
sativa Japonica Group]
Length = 1136
Score = 185 bits (470), Expect = 5e-45
Identities = 85/141 (60%), Positives = 111/141 (78%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDLYFI+WD++LIP D MD P ++H VT+EE+Q++FV+YM+ND+LG IS
Sbjct: 825 LDGDLYFITWDDKLIPEKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAIST 884
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH +HAD+ PLKARSP+CL+LA L AVDFAKTG PAEMP +L P+EYPDFME+ ++PM
Sbjct: 885 AHLIHADRSPLKARSPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPM 944
Query: 362 YISTGILGKLYRAAKDRLSEN 424
YIS G+LGKLYR+A + ++
Sbjct: 945 YISNGVLGKLYRSAMGHMEKS 965
>gb|EEE61147.1| hypothetical protein OsJ_15104 [Oryza sativa Japonica Group]
Length = 335
Score = 185 bits (470), Expect = 5e-45
Identities = 85/141 (60%), Positives = 111/141 (78%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDLYFI+WD++LIP D MD P ++H VT+EE+Q++FV+YM+ND+LG IS
Sbjct: 24 LDGDLYFITWDDKLIPEKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAIST 83
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH +HAD+ PLKARSP+CL+LA L AVDFAKTG PAEMP +L P+EYPDFME+ ++PM
Sbjct: 84 AHLIHADRSPLKARSPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPM 143
Query: 362 YISTGILGKLYRAAKDRLSEN 424
YIS G+LGKLYR+A + ++
Sbjct: 144 YISNGVLGKLYRSAMGHMEKS 164
>gb|EAY94464.1| hypothetical protein OsI_16234 [Oryza sativa Indica Group]
Length = 1136
Score = 185 bits (470), Expect = 5e-45
Identities = 85/141 (60%), Positives = 111/141 (78%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDLYFI+WD++LIP D MD P ++H VT+EE+Q++FV+YM+ND+LG IS
Sbjct: 825 LDGDLYFITWDDKLIPEKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAIST 884
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH +HAD+ PLKARSP+CL+LA L AVDFAKTG PAEMP +L P+EYPDFME+ ++PM
Sbjct: 885 AHLIHADRSPLKARSPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPM 944
Query: 362 YISTGILGKLYRAAKDRLSEN 424
YIS G+LGKLYR+A + ++
Sbjct: 945 YISNGVLGKLYRSAMGHMEKS 965
>ref|NP_001053027.1| Os04g0465700 [Oryza sativa Japonica Group]
gi|113564598|dbj|BAF14941.1| Os04g0465700, partial
[Oryza sativa Japonica Group]
Length = 377
Score = 185 bits (470), Expect = 5e-45
Identities = 85/141 (60%), Positives = 111/141 (78%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDLYFI+WD++LIP D MD P ++H VT+EE+Q++FV+YM+ND+LG IS
Sbjct: 66 LDGDLYFITWDDKLIPEKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAIST 125
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH +HAD+ PLKARSP+CL+LA L AVDFAKTG PAEMP +L P+EYPDFME+ ++PM
Sbjct: 126 AHLIHADRSPLKARSPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPM 185
Query: 362 YISTGILGKLYRAAKDRLSEN 424
YIS G+LGKLYR+A + ++
Sbjct: 186 YISNGVLGKLYRSAMGHMEKS 206
>ref|XP_006653498.1| PREDICTED: probable RNA-dependent RNA polymerase 2-like [Oryza
brachyantha]
Length = 1055
Score = 185 bits (469), Expect = 6e-45
Identities = 85/140 (60%), Positives = 111/140 (79%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDLYFI+WD++LIP D MD P ++H+VT+EE+Q++FV+YM+ND+LG+IS
Sbjct: 774 LDGDLYFITWDDKLIPEKVDTPMDYTATRPRIMDHAVTLEEIQKHFVDYMINDSLGVIST 833
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH +HAD+ PLKARSP+CL+LA L AVDFAKTG PAEMP +L P+EYPDFME+ ++P
Sbjct: 834 AHLIHADRAPLKARSPECLQLATLHSMAVDFAKTGAPAEMPRALRPREYPDFMERWEKPT 893
Query: 362 YISTGILGKLYRAAKDRLSE 421
YIS G+LGKLYR+A + E
Sbjct: 894 YISHGVLGKLYRSAAGHMEE 913
>gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
Length = 1115
Score = 184 bits (468), Expect = 8e-45
Identities = 88/146 (60%), Positives = 109/146 (74%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGDL+FISWD LIPP A MD I R P ++H VT+EE+Q++FV+YM+NDTLG IS
Sbjct: 821 LDGDLFFISWDTNLIPPRTTAPMDYIGRRPRIMDHDVTLEEIQKFFVDYMINDTLGGIST 880
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH +HAD+EP KA S CL+LA L AVDFAKTG PAEMP +L P++YPDFME+ DRPM
Sbjct: 881 AHLIHADREPEKAFSENCLQLATLHSMAVDFAKTGAPAEMPRALRPRDYPDFMERLDRPM 940
Query: 362 YISTGILGKLYRAAKDRLSENKKAVI 439
Y+S G LGKLYRA + S+ ++
Sbjct: 941 YVSNGALGKLYRATVESESQGSSNLV 966
>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
gi|297733815|emb|CBI15062.3| unnamed protein product
[Vitis vinifera]
Length = 1127
Score = 184 bits (468), Expect = 8e-45
Identities = 92/146 (63%), Positives = 109/146 (74%), Gaps = 1/146 (0%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGD +FI WDE LIP +A MD R P ++H VT+EE+Q++FV+YM+NDTLG+IS
Sbjct: 823 LDGDQFFICWDEGLIPSQTEAPMDYTSRRPRIMDHDVTLEEIQKFFVDYMINDTLGVIST 882
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH VHAD+EP KARS KCLELA L AVDFAKTG PAEMP L PKE+PDFME+ D+PM
Sbjct: 883 AHLVHADREPEKARSKKCLELATLHSMAVDFAKTGAPAEMPRVLKPKEFPDFMERVDKPM 942
Query: 362 YISTGILGKLYRAA-KDRLSENKKAV 436
YIS G LGKLYRA R++E V
Sbjct: 943 YISNGALGKLYRATIASRVNEKSSFV 968
>ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutrema salsugineum]
gi|557097970|gb|ESQ38406.1| hypothetical protein
EUTSA_v10028370mg [Eutrema salsugineum]
Length = 1124
Score = 184 bits (467), Expect = 1e-44
Identities = 83/142 (58%), Positives = 110/142 (77%)
Frame = +2
Query: 2 LDGDLYFISWDERLIPPFQDAAMDCIDRPPSKLNHSVTIEEVQEYFVNYMLNDTLGLISN 181
LDGD +F+SWDE+LIP D MD P ++H VT+EE+ ++FV+YM++DTLG+IS
Sbjct: 829 LDGDQFFVSWDEKLIPSQMDPPMDYAGSRPRIMDHDVTLEEIHKFFVDYMISDTLGVIST 888
Query: 182 AHSVHADKEPLKARSPKCLELAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPM 361
AH +HAD++P KARS KCLELA L +AVDFAKTG PAEMPY+L P+E+PDF+E+ ++PM
Sbjct: 889 AHLIHADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPM 948
Query: 362 YISTGILGKLYRAAKDRLSENK 427
YIS + GKLYRA K L++ K
Sbjct: 949 YISESVFGKLYRAVKRSLAQRK 970