BLASTX nr result

ID: Ephedra27_contig00030958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00030958
         (383 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004234751.1| PREDICTED: protein RRP5 homolog [Solanum lyc...    56   4e-06

>ref|XP_004234751.1| PREDICTED: protein RRP5 homolog [Solanum lycopersicum]
          Length = 1869

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
 Frame = -2

Query: 187 QEEEEVADFPRGGRSLLSRSEVQEAREEADQEFFAE-----MKQKRRKKDKSETDDVL-- 29
           Q EEEV DFPRGG S LSR E+ E R E D EF AE      ++K+ K  K+ T+D L  
Sbjct: 18  QLEEEVPDFPRGGASSLSRKELDEVRAEVDAEFEAEDRLLKKRKKQHKLQKTNTEDDLGS 77

Query: 28  ---SGVTAKVPQ 2
               G+  K+P+
Sbjct: 78  LFGGGINGKLPR 89


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