BLASTX nr result
ID: Ephedra27_contig00030954
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00030954
(541 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001744043.1| hypothetical protein [Monosiga brevicollis M... 70 4e-10
ref|XP_827237.1| polyadenylate-binding protein 1 [Trypanosoma br... 69 5e-10
emb|CCC92940.1| putative polyadenylate-binding protein 1 [Trypan... 67 3e-09
ref|XP_004978120.1| PREDICTED: polyadenylate-binding protein 2-l... 66 6e-09
ref|XP_006409548.1| hypothetical protein EUTSA_v10022589mg [Eutr... 65 1e-08
ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding pr... 65 1e-08
ref|XP_002116418.1| hypothetical protein TRIADDRAFT_30761 [Trich... 65 1e-08
ref|NP_188259.1| poly(A) binding protein 6 [Arabidopsis thaliana... 65 1e-08
ref|XP_002114073.1| hypothetical protein TRIADDRAFT_27786 [Trich... 65 1e-08
emb|CCH46236.1| Polyadenylate-binding protein, cytoplasmic and n... 64 2e-08
ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arab... 64 2e-08
ref|XP_002175535.1| polyadenylate-binding protein [Schizosacchar... 64 2e-08
gb|EJW84648.1| polyadenylate-binding protein 4, partial [Wuchere... 64 2e-08
ref|XP_003136646.1| hypothetical protein LOAG_01058 [Loa loa] gi... 64 2e-08
ref|XP_001892845.1| polyadenylate-binding protein 4 [Brugia mala... 64 2e-08
ref|XP_001894673.1| polyadenylate-binding protein 1 [Brugia mala... 64 2e-08
dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas] 64 3e-08
emb|CDK24264.1| unnamed protein product [Kuraishia capsulata CBS... 63 4e-08
ref|XP_006588809.1| PREDICTED: polyadenylate-binding protein 7-l... 63 4e-08
ref|XP_006588808.1| PREDICTED: polyadenylate-binding protein 7-l... 63 4e-08
>ref|XP_001744043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778005|gb|EDQ91621.1| predicted protein [Monosiga
brevicollis MX1]
Length = 563
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/74 (45%), Positives = 52/74 (70%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
L + VTED L ++F +GT+TSLK++ D NG SRGFG + F + + +AA++E + G M+
Sbjct: 298 LPEDVTEDALRDKFSKFGTITSLKIMTDNNGDSRGFGFVNFDSADEAAAAIQE-MHGSMI 356
Query: 356 EGKLLYVNIAANKI 315
+GK LYV +A K+
Sbjct: 357 DGKPLYVALALRKV 370
>ref|XP_827237.1| polyadenylate-binding protein 1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1] gi|70831402|gb|EAN76907.1|
polyadenylate-binding protein 1, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|261331451|emb|CBH14445.1| PABP1 [Trypanosoma brucei
gambiense DAL972]
Length = 566
Score = 69.3 bits (168), Expect = 5e-10
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Frame = -3
Query: 521 TEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHMLEGKLL 342
TE LNE F YG + S +V+ D NGISRGFG + F N + +AA+RE + G ML GK L
Sbjct: 315 TEKDLNELFKEYGVIRSCRVMTDANGISRGFGFVSFENADQANAALRE-MNGRMLNGKPL 373
Query: 341 YVNIAANKICTCTFYKWRI-YCTQGIMHLIIFSTFIEPGNVVSKNDCKT 198
VNIA + T K ++ Q +MH + F PG+ + + + ++
Sbjct: 374 VVNIAQRRDQRLTMLKLQLQQRLQMMMHHMHPPPFGMPGHPLQRRNARS 422
>emb|CCC92940.1| putative polyadenylate-binding protein 1 [Trypanosoma congolense
IL3000]
Length = 552
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = -3
Query: 521 TEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHMLEGKLL 342
TE LNE F YG + S +V+ D NG+SRGFG + F N + +AA+RE ++G ML GK L
Sbjct: 315 TEKDLNELFKEYGVIRSCRVMTDANGVSRGFGFVSFENADQANAALRE-MSGRMLNGKPL 373
Query: 341 YVNIAANK 318
VNIA +
Sbjct: 374 VVNIAQRR 381
>ref|XP_004978120.1| PREDICTED: polyadenylate-binding protein 2-like [Setaria italica]
Length = 692
Score = 65.9 bits (159), Expect = 6e-09
Identities = 33/73 (45%), Positives = 46/73 (63%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
L D + +D L E F ++G +TS KV+CD+NG+S+G G + FS E S A+ E + G M+
Sbjct: 329 LDDSIGDDQLRELFSNFGKITSCKVMCDQNGLSKGSGFVAFSTREEASQALTE-MNGKMI 387
Query: 356 EGKLLYVNIAANK 318
GK LYV A K
Sbjct: 388 SGKPLYVAFAQRK 400
>ref|XP_006409548.1| hypothetical protein EUTSA_v10022589mg [Eutrema salsugineum]
gi|557110710|gb|ESQ51001.1| hypothetical protein
EUTSA_v10022589mg [Eutrema salsugineum]
Length = 649
Score = 65.1 bits (157), Expect = 1e-08
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
L D V+++ L E F YGT+TS KV+ D NGISRG G + FS E + AM E ++G M+
Sbjct: 322 LDDSVSDEKLKELFAPYGTVTSCKVMRDPNGISRGSGFVAFSTPEEATKAMSE-MSGKMI 380
Query: 356 EGKLLYVNIAANK 318
+ K LYV +A K
Sbjct: 381 DNKPLYVAVAQRK 393
>ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus] gi|449521207|ref|XP_004167621.1|
PREDICTED: probable polyadenylate-binding protein
At2g36660-like [Cucumis sativus]
Length = 640
Score = 65.1 bits (157), Expect = 1e-08
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
+ D VT++ L ERF +GT+TS K++ D+ GI++GFG +CFSN + A+ L G M
Sbjct: 303 IDDDVTDEELRERFSQFGTITSSKLMRDDKGINKGFGFVCFSNPDEAKRAV-NTLQGCMF 361
Query: 356 EGKLLYVNIAANK 318
GK LY+ IA K
Sbjct: 362 HGKPLYLAIAQRK 374
>ref|XP_002116418.1| hypothetical protein TRIADDRAFT_30761 [Trichoplax adhaerens]
gi|190581009|gb|EDV21088.1| hypothetical protein
TRIADDRAFT_30761, partial [Trichoplax adhaerens]
Length = 102
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
L D + + L E F +G++TS KV+CDE G S+GFG +CF+ E S A+ E ++G ++
Sbjct: 14 LDDAIDDARLKEEFSKFGSITSAKVMCDEKGASKGFGFVCFATQEEASKAINE-MSGRII 72
Query: 356 EGKLLYVNIAANK 318
K LYV A K
Sbjct: 73 VSKPLYVTFAQRK 85
>ref|NP_188259.1| poly(A) binding protein 6 [Arabidopsis thaliana]
gi|75317805|sp|O04319.1|PABP6_ARATH RecName:
Full=Polyadenylate-binding protein 6; Short=PABP-6;
Short=Poly(A)-binding protein 6
gi|2062166|gb|AAB63640.1| poly(A)-binding protein isolog
[Arabidopsis thaliana] gi|9279720|dbj|BAB01277.1|
poly(A) binding protein-like [Arabidopsis thaliana]
gi|332642284|gb|AEE75805.1| poly(A) binding protein 6
[Arabidopsis thaliana]
Length = 537
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/73 (45%), Positives = 45/73 (61%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
L + + E L E FG YG + S KV+C ENG S+GFG +CFSN E + A R L G ++
Sbjct: 311 LSESMNETRLREIFGCYGQIVSAKVMCHENGRSKGFGFVCFSNCEESKQAKR-YLNGFLV 369
Query: 356 EGKLLYVNIAANK 318
+GK + V +A K
Sbjct: 370 DGKPIVVRVAERK 382
>ref|XP_002114073.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
gi|190583092|gb|EDV23163.1| hypothetical protein
TRIADDRAFT_27786 [Trichoplax adhaerens]
Length = 622
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
L D++ + L + F ++GT+TS KV+ DE GISRGFG +CFS+ E + A+ E + G ++
Sbjct: 310 LDDVIDDAKLRQEFANFGTITSAKVMSDEKGISRGFGFVCFSSPEEATKAVTE-MNGRII 368
Query: 356 EGKLLYVNIAANK 318
K LYV +A K
Sbjct: 369 ISKPLYVALAQRK 381
>emb|CCH46236.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 652
Score = 64.3 bits (155), Expect = 2e-08
Identities = 34/73 (46%), Positives = 49/73 (67%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
L D + ++ L E F S+GT++S+KV+ DE+G S+GFG + FS+ E S A+ E + HML
Sbjct: 351 LDDSIDDEKLKEEFQSFGTISSVKVMIDESGKSKGFGFVSFSSPEEASRAISE-MNQHML 409
Query: 356 EGKLLYVNIAANK 318
GK LYV +A K
Sbjct: 410 AGKPLYVALAQRK 422
>ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata] gi|297329739|gb|EFH60158.1| hypothetical protein
ARALYDRAFT_899764 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
L D V+++ L E F YGT+TS KV+ D NG+SRG G + FS E + AM E ++G M+
Sbjct: 329 LDDSVSDEKLKELFTPYGTVTSCKVMRDPNGMSRGSGFVAFSTPEEATKAMSE-MSGKMI 387
Query: 356 EGKLLYVNIAANK 318
E K LYV +A K
Sbjct: 388 ENKPLYVAVAQRK 400
>ref|XP_002175535.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275] gi|212003582|gb|EEB09242.1| mRNA export
shuttling protein [Schizosaccharomyces japonicus yFS275]
Length = 621
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
LQD + ++ L F ++GT+TS KV+ DEN S+GFG +C+SN E + A+ E + ML
Sbjct: 360 LQDEIDDERLKSEFSAFGTITSAKVMTDENNKSKGFGFVCYSNPEEATKAIAE-MNQRML 418
Query: 356 EGKLLYVNIAANK 318
GK LYV +A K
Sbjct: 419 AGKPLYVALAQRK 431
>gb|EJW84648.1| polyadenylate-binding protein 4, partial [Wuchereria bancrofti]
Length = 519
Score = 63.9 bits (154), Expect = 2e-08
Identities = 32/73 (43%), Positives = 46/73 (63%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
L D V +D L + F +YG +TS KV+CD+NG S+GFG +CF + + A+ E + G M+
Sbjct: 175 LDDTVNDDILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKAVTE-MNGKMM 233
Query: 356 EGKLLYVNIAANK 318
K LYV +A K
Sbjct: 234 CTKPLYVALAQRK 246
>ref|XP_003136646.1| hypothetical protein LOAG_01058 [Loa loa]
gi|307768188|gb|EFO27422.1| hypothetical protein
LOAG_01058 [Loa loa]
Length = 655
Score = 63.9 bits (154), Expect = 2e-08
Identities = 32/73 (43%), Positives = 46/73 (63%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
L D V +D L + F +YG +TS KV+CD+NG S+GFG +CF + + A+ E + G M+
Sbjct: 311 LDDTVNDDILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKAVTE-MNGKMM 369
Query: 356 EGKLLYVNIAANK 318
K LYV +A K
Sbjct: 370 CTKPLYVALAQRK 382
>ref|XP_001892845.1| polyadenylate-binding protein 4 [Brugia malayi]
gi|158601405|gb|EDP38326.1| polyadenylate-binding
protein 4, putative [Brugia malayi]
Length = 462
Score = 63.9 bits (154), Expect = 2e-08
Identities = 32/73 (43%), Positives = 46/73 (63%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
L D V +D L + F +YG +TS KV+CD+NG S+GFG +CF + + A+ E + G M+
Sbjct: 311 LDDTVNDDILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKAVTE-MNGKMM 369
Query: 356 EGKLLYVNIAANK 318
K LYV +A K
Sbjct: 370 CTKPLYVALAQRK 382
>ref|XP_001894673.1| polyadenylate-binding protein 1 [Brugia malayi]
gi|158598601|gb|EDP36463.1| polyadenylate-binding
protein 1, putative [Brugia malayi]
Length = 655
Score = 63.9 bits (154), Expect = 2e-08
Identities = 32/73 (43%), Positives = 46/73 (63%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
L D V +D L + F +YG +TS KV+CD+NG S+GFG +CF + + A+ E + G M+
Sbjct: 311 LDDTVNDDILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKAVTE-MNGKMM 369
Query: 356 EGKLLYVNIAANK 318
K LYV +A K
Sbjct: 370 CTKPLYVALAQRK 382
>dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/73 (46%), Positives = 45/73 (61%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
L D +T+D L E F +GT+TS KV+ D NG+SRG G + FS E S A+ E + G M+
Sbjct: 318 LDDSITDDKLKELFSEFGTITSCKVMRDPNGVSRGSGFVAFSTAEEASRALTE-MNGKMV 376
Query: 356 EGKLLYVNIAANK 318
K LYV +A K
Sbjct: 377 VSKPLYVALAQRK 389
>emb|CDK24264.1| unnamed protein product [Kuraishia capsulata CBS 1993]
Length = 628
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/73 (43%), Positives = 46/73 (63%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
L+D + ++ L E F +GT+TS KV+ D NG S+GFG +CFS E + A+ E + M+
Sbjct: 339 LEDTIDDEKLREEFAQFGTITSAKVMTDNNGKSKGFGFVCFSEPEEATKAISE-MHQFMV 397
Query: 356 EGKLLYVNIAANK 318
GK LYV +A K
Sbjct: 398 AGKPLYVALAQKK 410
>ref|XP_006588809.1| PREDICTED: polyadenylate-binding protein 7-like isoform X2 [Glycine
max]
Length = 482
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
+ D VT+ L + F S GT+TS+KV+ D+ GIS+GFG +CFSN E + A+R G M
Sbjct: 294 IDDDVTDKELRDLFSSCGTITSVKVMRDDKGISKGFGFVCFSNPEEANKAVRS-FNGCMF 352
Query: 356 EGKLLYVNIAANKI 315
K LY+ IA K+
Sbjct: 353 HRKPLYIAIAQRKM 366
>ref|XP_006588808.1| PREDICTED: polyadenylate-binding protein 7-like isoform X1 [Glycine
max]
Length = 489
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = -3
Query: 536 LQDIVTEDYLNERFGSYGTMTSLKVVCDENGISRGFGCICFSNLEATSAAMRELLAGHML 357
+ D VT+ L + F S GT+TS+KV+ D+ GIS+GFG +CFSN E + A+R G M
Sbjct: 301 IDDDVTDKELRDLFSSCGTITSVKVMRDDKGISKGFGFVCFSNPEEANKAVRS-FNGCMF 359
Query: 356 EGKLLYVNIAANKI 315
K LY+ IA K+
Sbjct: 360 HRKPLYIAIAQRKM 373