BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00030895
         (384 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006302331.1| hypothetical protein CARUB_v10020389mg [Caps...    59   9e-07
ref|XP_002886503.1| pentatricopeptide repeat-containing protein ...    58   2e-06
ref|NP_564786.1| pentatricopeptide repeat-containing protein [Ar...    56   4e-06
gb|AAM62848.1| putative membrane-associated salt-inducible prote...    56   6e-06

>ref|XP_006302331.1| hypothetical protein CARUB_v10020389mg [Capsella rubella]
           gi|482571041|gb|EOA35229.1| hypothetical protein
           CARUB_v10020389mg [Capsella rubella]
          Length = 408

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
 Frame = +2

Query: 182 TTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLEL 352
           +T N + Q LC  KK ++AK LL   L   +  N  TY H+IR FC ++++E+A +L ++
Sbjct: 258 STYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIRGFCNEDDLEEAKKLFKV 317

Query: 353 MINKGIVPSS 382
           M+N+G  P S
Sbjct: 318 MVNRGCKPDS 327


>ref|XP_002886503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297332344|gb|EFH62762.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 408

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
 Frame = +2

Query: 182 TTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLEL 352
           +T N + Q LC  KK ++AK LL   L   +  N  TY H+IR FC +++ E+A +L ++
Sbjct: 258 STYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIRGFCNEDDFEEAKKLFKV 317

Query: 353 MINKGIVPSS 382
           M+N+G  P S
Sbjct: 318 MVNRGCKPDS 327


>ref|NP_564786.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806489|sp|Q8LE47.2|PPR87_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g61870, mitochondrial; AltName: Full=Protein
           PENTATRICOPEPTIDE REPEAT 336; Flags: Precursor
           gi|16226403|gb|AAL16159.1|AF428391_1 At1g61870/F8K4_8
           [Arabidopsis thaliana] gi|3367521|gb|AAC28506.1| Similar
           to gb|U08285 membrane-associated salt-inducible protein
           from Nicotiana tabacum. ESTs gb|T44131 and gb|T04378
           come from this gene [Arabidopsis thaliana]
           gi|17065564|gb|AAL32936.1| Unknown protein [Arabidopsis
           thaliana] gi|32815835|gb|AAP88326.1| At1g61870
           [Arabidopsis thaliana] gi|332195777|gb|AEE33898.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 408

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
 Frame = +2

Query: 182 TTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLEL 352
           +T N + Q LC  KK ++AK LL   L   +  N  TY H+I  FC +++ E+A +L ++
Sbjct: 258 STYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKI 317

Query: 353 MINKGIVPSS 382
           M+N+G  P S
Sbjct: 318 MVNRGCKPDS 327


>gb|AAM62848.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 407

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
 Frame = +2

Query: 182 TTINPQFQGLCNGKKLQQAKVLL---LRESITTNRATYEHIIRCFCMDNNIEQASELLEL 352
           +T N + Q LC  KK ++AK LL   L   +  N  TY H+I  FC +++ E+A +L ++
Sbjct: 257 STYNIRIQSLCKKKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKV 316

Query: 353 MINKGIVPSS 382
           M+N+G  P S
Sbjct: 317 MVNRGCKPDS 326