BLASTX nr result
ID: Ephedra27_contig00030857
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00030857
(419 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE77635.1| unknown [Picea sitchensis] 64 8e-12
ref|XP_006854551.1| hypothetical protein AMTR_s00030p00070290, p... 59 3e-10
ref|XP_004299128.1| PREDICTED: exosome complex component RRP41-l... 57 7e-10
ref|XP_004299129.1| PREDICTED: exosome complex component RRP41-l... 57 7e-10
ref|XP_002981139.1| hypothetical protein SELMODRAFT_233636 [Sela... 58 1e-09
ref|XP_002982620.1| hypothetical protein SELMODRAFT_155148 [Sela... 58 1e-09
ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [... 56 1e-09
ref|XP_004290319.1| PREDICTED: exosome complex component RRP41-l... 57 2e-09
ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative ... 57 2e-09
ref|XP_003554748.1| PREDICTED: exosome complex component RRP41-l... 56 2e-09
ref|XP_003549686.1| PREDICTED: exosome complex component RRP41 i... 56 2e-09
gb|ESW19265.1| hypothetical protein PHAVU_006G109900g [Phaseolus... 56 2e-09
gb|ACU22892.1| unknown [Glycine max] 56 3e-09
ref|XP_002320845.1| exonuclease RRP41 family protein [Populus tr... 56 3e-09
ref|XP_006443538.1| hypothetical protein CICLE_v10021944mg [Citr... 54 7e-09
gb|EOX95793.1| 3'-5'-exoribonuclease family protein isoform 1 [T... 54 1e-08
ref|XP_006291576.1| hypothetical protein CARUB_v10017729mg, part... 55 1e-08
gb|EXC22513.1| Exosome complex component [Morus notabilis] 54 1e-08
ref|XP_006339670.1| PREDICTED: exosome complex component RRP41-l... 55 1e-08
ref|XP_004229977.1| PREDICTED: exosome complex component RRP41-l... 55 1e-08
>gb|ADE77635.1| unknown [Picea sitchensis]
Length = 243
Score = 64.3 bits (155), Expect(2) = 8e-12
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = -3
Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+ L++RQL+ +GV+DKADG AIFEMGNTKV+ AVYGPHEV
Sbjct: 15 RPLEMRQLHAQLGVVDKADGSAIFEMGNTKVIAAVYGPHEV 55
Score = 31.2 bits (69), Expect(2) = 8e-12
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
ME+ISPEGL LDGRR
Sbjct: 1 MEYISPEGLRLDGRR 15
>ref|XP_006854551.1| hypothetical protein AMTR_s00030p00070290, partial [Amborella
trichopoda] gi|548858237|gb|ERN16018.1| hypothetical
protein AMTR_s00030p00070290, partial [Amborella
trichopoda]
Length = 246
Score = 59.3 bits (142), Expect(2) = 3e-10
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = -3
Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+ L++RQ+N +GV+ KADG A+FEMGNTKV+ AVYGP EV
Sbjct: 34 RPLEMRQINAEIGVVVKADGSAVFEMGNTKVIAAVYGPREV 74
Score = 30.8 bits (68), Expect(2) = 3e-10
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
ME++SPEGL LDGRR
Sbjct: 20 MEYVSPEGLRLDGRR 34
>ref|XP_004299128.1| PREDICTED: exosome complex component RRP41-like isoform 1 [Fragaria
vesca subsp. vesca]
Length = 248
Score = 56.6 bits (135), Expect(2) = 7e-10
Identities = 24/41 (58%), Positives = 33/41 (80%)
Frame = -3
Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+ +++RQ+ +GV+ KADG A+FEMGNTKV+ AVYGP EV
Sbjct: 15 RPMEMRQIRAEIGVVSKADGSAMFEMGNTKVIAAVYGPREV 55
Score = 32.3 bits (72), Expect(2) = 7e-10
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
MEFISPEGL LDGRR
Sbjct: 1 MEFISPEGLRLDGRR 15
>ref|XP_004299129.1| PREDICTED: exosome complex component RRP41-like isoform 2 [Fragaria
vesca subsp. vesca]
Length = 241
Score = 56.6 bits (135), Expect(2) = 7e-10
Identities = 24/41 (58%), Positives = 33/41 (80%)
Frame = -3
Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+ +++RQ+ +GV+ KADG A+FEMGNTKV+ AVYGP EV
Sbjct: 15 RPMEMRQIRAEIGVVSKADGSAMFEMGNTKVIAAVYGPREV 55
Score = 32.3 bits (72), Expect(2) = 7e-10
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
MEFISPEGL LDGRR
Sbjct: 1 MEFISPEGLRLDGRR 15
>ref|XP_002981139.1| hypothetical protein SELMODRAFT_233636 [Selaginella moellendorffii]
gi|300151193|gb|EFJ17840.1| hypothetical protein
SELMODRAFT_233636 [Selaginella moellendorffii]
Length = 264
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/41 (60%), Positives = 35/41 (85%)
Frame = -3
Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+ L++RQL+ +GV++ A+G A+FEMGNTKV+ AVYGPHEV
Sbjct: 15 RPLEMRQLHAELGVVENANGSAMFEMGNTKVIAAVYGPHEV 55
Score = 30.4 bits (67), Expect(2) = 1e-09
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
MEF+ PEGL LDGRR
Sbjct: 1 MEFVGPEGLRLDGRR 15
>ref|XP_002982620.1| hypothetical protein SELMODRAFT_155148 [Selaginella moellendorffii]
gi|300149719|gb|EFJ16373.1| hypothetical protein
SELMODRAFT_155148 [Selaginella moellendorffii]
Length = 242
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 25/41 (60%), Positives = 35/41 (85%)
Frame = -3
Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+ L++RQL+ +GV++ A+G A+FEMGNTKV+ AVYGPHEV
Sbjct: 15 RPLEMRQLHAELGVVENANGSAMFEMGNTKVIAAVYGPHEV 55
Score = 30.4 bits (67), Expect(2) = 1e-09
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
MEF+ PEGL LDGRR
Sbjct: 1 MEFVGPEGLRLDGRR 15
>ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [Vitis vinifera]
gi|147867252|emb|CAN81194.1| hypothetical protein
VITISV_022853 [Vitis vinifera]
gi|297745390|emb|CBI40470.3| unnamed protein product
[Vitis vinifera]
Length = 241
Score = 56.2 bits (134), Expect(2) = 1e-09
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = -3
Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+ +++RQ+ G +G + KADG A FEMGNTKV+ AVYGP EV
Sbjct: 15 RPMEMRQIRGEIGAVAKADGSAFFEMGNTKVIAAVYGPREV 55
Score = 32.0 bits (71), Expect(2) = 1e-09
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
MEF+SPEGL LDGRR
Sbjct: 1 MEFVSPEGLRLDGRR 15
>ref|XP_004290319.1| PREDICTED: exosome complex component RRP41-like [Fragaria vesca
subsp. vesca]
Length = 241
Score = 56.6 bits (135), Expect(2) = 2e-09
Identities = 24/41 (58%), Positives = 33/41 (80%)
Frame = -3
Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+ +++RQ+ +GV+ KADG A+FEMGNTKV+ AVYGP EV
Sbjct: 15 RPMEMRQIRAEIGVVSKADGSAMFEMGNTKVIAAVYGPREV 55
Score = 30.8 bits (68), Expect(2) = 2e-09
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
MEF+SPEGL LDGRR
Sbjct: 1 MEFVSPEGLCLDGRR 15
>ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative [Ricinus communis]
gi|223529966|gb|EEF31893.1| Exosome complex exonuclease
RRP41, putative [Ricinus communis]
Length = 241
Score = 56.6 bits (135), Expect(2) = 2e-09
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = -3
Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+ +++RQL +G + KADG A+FEMGNTKV+ AVYGP EV
Sbjct: 15 RPMEMRQLRAQIGAVSKADGSAVFEMGNTKVIAAVYGPREV 55
Score = 30.8 bits (68), Expect(2) = 2e-09
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
ME++SPEGL LDGRR
Sbjct: 1 MEYVSPEGLRLDGRR 15
>ref|XP_003554748.1| PREDICTED: exosome complex component RRP41-like [Glycine max]
Length = 241
Score = 56.2 bits (134), Expect(2) = 2e-09
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = -3
Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+ +++RQ+ +G + KADG AIFEMGNTKV+ AVYGP EV
Sbjct: 15 RPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 55
Score = 30.8 bits (68), Expect(2) = 2e-09
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
ME++SPEGL LDGRR
Sbjct: 1 MEYVSPEGLRLDGRR 15
>ref|XP_003549686.1| PREDICTED: exosome complex component RRP41 isoform X1 [Glycine max]
gi|571535380|ref|XP_006600700.1| PREDICTED: exosome
complex component RRP41 isoform X2 [Glycine max]
Length = 241
Score = 56.2 bits (134), Expect(2) = 2e-09
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = -3
Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+ +++RQ+ +G + KADG AIFEMGNTKV+ AVYGP EV
Sbjct: 15 RPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 55
Score = 30.8 bits (68), Expect(2) = 2e-09
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
ME++SPEGL LDGRR
Sbjct: 1 MEYVSPEGLRLDGRR 15
>gb|ESW19265.1| hypothetical protein PHAVU_006G109900g [Phaseolus vulgaris]
Length = 240
Score = 56.2 bits (134), Expect(2) = 2e-09
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = -3
Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+ +++RQ+ +G + KADG AIFEMGNTKV+ AVYGP EV
Sbjct: 15 RPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 55
Score = 30.8 bits (68), Expect(2) = 2e-09
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
ME++SPEGL LDGRR
Sbjct: 1 MEYVSPEGLRLDGRR 15
>gb|ACU22892.1| unknown [Glycine max]
Length = 190
Score = 56.2 bits (134), Expect(2) = 3e-09
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = -3
Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+ +++RQ+ +G + KADG AIFEMGNTKV+ AVYGP EV
Sbjct: 15 RPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 55
Score = 30.8 bits (68), Expect(2) = 3e-09
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
ME++SPEGL LDGRR
Sbjct: 1 MEYVSPEGLRLDGRR 15
>ref|XP_002320845.1| exonuclease RRP41 family protein [Populus trichocarpa]
gi|118489833|gb|ABK96716.1| unknown [Populus trichocarpa
x Populus deltoides] gi|222861618|gb|EEE99160.1|
exonuclease RRP41 family protein [Populus trichocarpa]
Length = 241
Score = 55.8 bits (133), Expect(2) = 3e-09
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = -3
Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+ +++RQL +G + KADG A+FEMGNTKV+ AVYGP EV
Sbjct: 15 RPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREV 55
Score = 30.8 bits (68), Expect(2) = 3e-09
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
MEF++PEGL LDGRR
Sbjct: 1 MEFVNPEGLRLDGRR 15
>ref|XP_006443538.1| hypothetical protein CICLE_v10021944mg [Citrus clementina]
gi|568851047|ref|XP_006479205.1| PREDICTED: exosome
complex component RRP41-like isoform X1 [Citrus
sinensis] gi|568851049|ref|XP_006479206.1| PREDICTED:
exosome complex component RRP41-like isoform X2 [Citrus
sinensis] gi|557545800|gb|ESR56778.1| hypothetical
protein CICLE_v10021944mg [Citrus clementina]
Length = 241
Score = 53.5 bits (127), Expect(2) = 7e-09
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = -3
Query: 114 QLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
++RQL +G + KADG A+FEMGNTKV+ AVYGP EV
Sbjct: 18 EMRQLRAEIGNVAKADGSAVFEMGNTKVIAAVYGPREV 55
Score = 32.0 bits (71), Expect(2) = 7e-09
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
MEF+SPEGL LDGRR
Sbjct: 1 MEFVSPEGLRLDGRR 15
>gb|EOX95793.1| 3'-5'-exoribonuclease family protein isoform 1 [Theobroma cacao]
Length = 316
Score = 53.9 bits (128), Expect(2) = 1e-08
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = -3
Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+ +++RQ+ +G + +ADG A+FEMGNTKV+ AVYGP EV
Sbjct: 90 RPMEMRQIRAEIGTVARADGSAVFEMGNTKVIAAVYGPREV 130
Score = 30.8 bits (68), Expect(2) = 1e-08
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
ME++SPEGL LDGRR
Sbjct: 76 MEYVSPEGLRLDGRR 90
>ref|XP_006291576.1| hypothetical protein CARUB_v10017729mg, partial [Capsella rubella]
gi|482560283|gb|EOA24474.1| hypothetical protein
CARUB_v10017729mg, partial [Capsella rubella]
Length = 299
Score = 55.1 bits (131), Expect(2) = 1e-08
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = -3
Query: 114 QLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
++RQ+ VGV+ KADG A+FEMGNTKV+ AVYGP E+
Sbjct: 76 EMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREI 113
Score = 29.6 bits (65), Expect(2) = 1e-08
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
ME+++PEGL LDGRR
Sbjct: 59 MEYVNPEGLRLDGRR 73
>gb|EXC22513.1| Exosome complex component [Morus notabilis]
Length = 260
Score = 53.9 bits (128), Expect(2) = 1e-08
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = -3
Query: 114 QLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+LRQ+ +G + KADG A+FEMGNTKV+ AVYGP EV
Sbjct: 18 ELRQIRAELGAVAKADGSAVFEMGNTKVIAAVYGPREV 55
Score = 30.8 bits (68), Expect(2) = 1e-08
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
MEF++PEGL LDGRR
Sbjct: 1 MEFVNPEGLRLDGRR 15
>ref|XP_006339670.1| PREDICTED: exosome complex component RRP41-like isoform X1 [Solanum
tuberosum] gi|565345171|ref|XP_006339671.1| PREDICTED:
exosome complex component RRP41-like isoform X2 [Solanum
tuberosum]
Length = 243
Score = 55.1 bits (131), Expect(2) = 1e-08
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = -3
Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+ +++RQL +GV+ +ADG A FEMGNTKV+ AVYGP EV
Sbjct: 15 RPMEMRQLRAEIGVVSRADGSASFEMGNTKVIAAVYGPREV 55
Score = 29.6 bits (65), Expect(2) = 1e-08
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
ME+++PEGL LDGRR
Sbjct: 1 MEYVNPEGLRLDGRR 15
>ref|XP_004229977.1| PREDICTED: exosome complex component RRP41-like [Solanum
lycopersicum]
Length = 243
Score = 55.1 bits (131), Expect(2) = 1e-08
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = -3
Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
+ +++RQL +GV+ +ADG A FEMGNTKV+ AVYGP EV
Sbjct: 15 RPMEMRQLRAEIGVVSRADGSASFEMGNTKVIAAVYGPREV 55
Score = 29.6 bits (65), Expect(2) = 1e-08
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1
Query: 164 MEFISPEGLHLDGRR 120
ME+++PEGL LDGRR
Sbjct: 1 MEYVNPEGLRLDGRR 15