BLASTX nr result

ID: Ephedra27_contig00030857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00030857
         (419 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77635.1| unknown [Picea sitchensis]                              64   8e-12
ref|XP_006854551.1| hypothetical protein AMTR_s00030p00070290, p...    59   3e-10
ref|XP_004299128.1| PREDICTED: exosome complex component RRP41-l...    57   7e-10
ref|XP_004299129.1| PREDICTED: exosome complex component RRP41-l...    57   7e-10
ref|XP_002981139.1| hypothetical protein SELMODRAFT_233636 [Sela...    58   1e-09
ref|XP_002982620.1| hypothetical protein SELMODRAFT_155148 [Sela...    58   1e-09
ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [...    56   1e-09
ref|XP_004290319.1| PREDICTED: exosome complex component RRP41-l...    57   2e-09
ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative ...    57   2e-09
ref|XP_003554748.1| PREDICTED: exosome complex component RRP41-l...    56   2e-09
ref|XP_003549686.1| PREDICTED: exosome complex component RRP41 i...    56   2e-09
gb|ESW19265.1| hypothetical protein PHAVU_006G109900g [Phaseolus...    56   2e-09
gb|ACU22892.1| unknown [Glycine max]                                   56   3e-09
ref|XP_002320845.1| exonuclease RRP41 family protein [Populus tr...    56   3e-09
ref|XP_006443538.1| hypothetical protein CICLE_v10021944mg [Citr...    54   7e-09
gb|EOX95793.1| 3'-5'-exoribonuclease family protein isoform 1 [T...    54   1e-08
ref|XP_006291576.1| hypothetical protein CARUB_v10017729mg, part...    55   1e-08
gb|EXC22513.1| Exosome complex component [Morus notabilis]             54   1e-08
ref|XP_006339670.1| PREDICTED: exosome complex component RRP41-l...    55   1e-08
ref|XP_004229977.1| PREDICTED: exosome complex component RRP41-l...    55   1e-08

>gb|ADE77635.1| unknown [Picea sitchensis]
          Length = 243

 Score = 64.3 bits (155), Expect(2) = 8e-12
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = -3

Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           + L++RQL+  +GV+DKADG AIFEMGNTKV+ AVYGPHEV
Sbjct: 15  RPLEMRQLHAQLGVVDKADGSAIFEMGNTKVIAAVYGPHEV 55



 Score = 31.2 bits (69), Expect(2) = 8e-12
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           ME+ISPEGL LDGRR
Sbjct: 1   MEYISPEGLRLDGRR 15


>ref|XP_006854551.1| hypothetical protein AMTR_s00030p00070290, partial [Amborella
           trichopoda] gi|548858237|gb|ERN16018.1| hypothetical
           protein AMTR_s00030p00070290, partial [Amborella
           trichopoda]
          Length = 246

 Score = 59.3 bits (142), Expect(2) = 3e-10
 Identities = 26/41 (63%), Positives = 34/41 (82%)
 Frame = -3

Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           + L++RQ+N  +GV+ KADG A+FEMGNTKV+ AVYGP EV
Sbjct: 34  RPLEMRQINAEIGVVVKADGSAVFEMGNTKVIAAVYGPREV 74



 Score = 30.8 bits (68), Expect(2) = 3e-10
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           ME++SPEGL LDGRR
Sbjct: 20  MEYVSPEGLRLDGRR 34


>ref|XP_004299128.1| PREDICTED: exosome complex component RRP41-like isoform 1 [Fragaria
           vesca subsp. vesca]
          Length = 248

 Score = 56.6 bits (135), Expect(2) = 7e-10
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = -3

Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           + +++RQ+   +GV+ KADG A+FEMGNTKV+ AVYGP EV
Sbjct: 15  RPMEMRQIRAEIGVVSKADGSAMFEMGNTKVIAAVYGPREV 55



 Score = 32.3 bits (72), Expect(2) = 7e-10
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           MEFISPEGL LDGRR
Sbjct: 1   MEFISPEGLRLDGRR 15


>ref|XP_004299129.1| PREDICTED: exosome complex component RRP41-like isoform 2 [Fragaria
           vesca subsp. vesca]
          Length = 241

 Score = 56.6 bits (135), Expect(2) = 7e-10
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = -3

Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           + +++RQ+   +GV+ KADG A+FEMGNTKV+ AVYGP EV
Sbjct: 15  RPMEMRQIRAEIGVVSKADGSAMFEMGNTKVIAAVYGPREV 55



 Score = 32.3 bits (72), Expect(2) = 7e-10
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           MEFISPEGL LDGRR
Sbjct: 1   MEFISPEGLRLDGRR 15


>ref|XP_002981139.1| hypothetical protein SELMODRAFT_233636 [Selaginella moellendorffii]
           gi|300151193|gb|EFJ17840.1| hypothetical protein
           SELMODRAFT_233636 [Selaginella moellendorffii]
          Length = 264

 Score = 57.8 bits (138), Expect(2) = 1e-09
 Identities = 25/41 (60%), Positives = 35/41 (85%)
 Frame = -3

Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           + L++RQL+  +GV++ A+G A+FEMGNTKV+ AVYGPHEV
Sbjct: 15  RPLEMRQLHAELGVVENANGSAMFEMGNTKVIAAVYGPHEV 55



 Score = 30.4 bits (67), Expect(2) = 1e-09
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           MEF+ PEGL LDGRR
Sbjct: 1   MEFVGPEGLRLDGRR 15


>ref|XP_002982620.1| hypothetical protein SELMODRAFT_155148 [Selaginella moellendorffii]
           gi|300149719|gb|EFJ16373.1| hypothetical protein
           SELMODRAFT_155148 [Selaginella moellendorffii]
          Length = 242

 Score = 57.8 bits (138), Expect(2) = 1e-09
 Identities = 25/41 (60%), Positives = 35/41 (85%)
 Frame = -3

Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           + L++RQL+  +GV++ A+G A+FEMGNTKV+ AVYGPHEV
Sbjct: 15  RPLEMRQLHAELGVVENANGSAMFEMGNTKVIAAVYGPHEV 55



 Score = 30.4 bits (67), Expect(2) = 1e-09
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           MEF+ PEGL LDGRR
Sbjct: 1   MEFVGPEGLRLDGRR 15


>ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [Vitis vinifera]
           gi|147867252|emb|CAN81194.1| hypothetical protein
           VITISV_022853 [Vitis vinifera]
           gi|297745390|emb|CBI40470.3| unnamed protein product
           [Vitis vinifera]
          Length = 241

 Score = 56.2 bits (134), Expect(2) = 1e-09
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -3

Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           + +++RQ+ G +G + KADG A FEMGNTKV+ AVYGP EV
Sbjct: 15  RPMEMRQIRGEIGAVAKADGSAFFEMGNTKVIAAVYGPREV 55



 Score = 32.0 bits (71), Expect(2) = 1e-09
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           MEF+SPEGL LDGRR
Sbjct: 1   MEFVSPEGLRLDGRR 15


>ref|XP_004290319.1| PREDICTED: exosome complex component RRP41-like [Fragaria vesca
           subsp. vesca]
          Length = 241

 Score = 56.6 bits (135), Expect(2) = 2e-09
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = -3

Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           + +++RQ+   +GV+ KADG A+FEMGNTKV+ AVYGP EV
Sbjct: 15  RPMEMRQIRAEIGVVSKADGSAMFEMGNTKVIAAVYGPREV 55



 Score = 30.8 bits (68), Expect(2) = 2e-09
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           MEF+SPEGL LDGRR
Sbjct: 1   MEFVSPEGLCLDGRR 15


>ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative [Ricinus communis]
           gi|223529966|gb|EEF31893.1| Exosome complex exonuclease
           RRP41, putative [Ricinus communis]
          Length = 241

 Score = 56.6 bits (135), Expect(2) = 2e-09
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -3

Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           + +++RQL   +G + KADG A+FEMGNTKV+ AVYGP EV
Sbjct: 15  RPMEMRQLRAQIGAVSKADGSAVFEMGNTKVIAAVYGPREV 55



 Score = 30.8 bits (68), Expect(2) = 2e-09
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           ME++SPEGL LDGRR
Sbjct: 1   MEYVSPEGLRLDGRR 15


>ref|XP_003554748.1| PREDICTED: exosome complex component RRP41-like [Glycine max]
          Length = 241

 Score = 56.2 bits (134), Expect(2) = 2e-09
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -3

Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           + +++RQ+   +G + KADG AIFEMGNTKV+ AVYGP EV
Sbjct: 15  RPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 55



 Score = 30.8 bits (68), Expect(2) = 2e-09
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           ME++SPEGL LDGRR
Sbjct: 1   MEYVSPEGLRLDGRR 15


>ref|XP_003549686.1| PREDICTED: exosome complex component RRP41 isoform X1 [Glycine max]
           gi|571535380|ref|XP_006600700.1| PREDICTED: exosome
           complex component RRP41 isoform X2 [Glycine max]
          Length = 241

 Score = 56.2 bits (134), Expect(2) = 2e-09
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -3

Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           + +++RQ+   +G + KADG AIFEMGNTKV+ AVYGP EV
Sbjct: 15  RPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 55



 Score = 30.8 bits (68), Expect(2) = 2e-09
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           ME++SPEGL LDGRR
Sbjct: 1   MEYVSPEGLRLDGRR 15


>gb|ESW19265.1| hypothetical protein PHAVU_006G109900g [Phaseolus vulgaris]
          Length = 240

 Score = 56.2 bits (134), Expect(2) = 2e-09
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -3

Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           + +++RQ+   +G + KADG AIFEMGNTKV+ AVYGP EV
Sbjct: 15  RPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 55



 Score = 30.8 bits (68), Expect(2) = 2e-09
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           ME++SPEGL LDGRR
Sbjct: 1   MEYVSPEGLRLDGRR 15


>gb|ACU22892.1| unknown [Glycine max]
          Length = 190

 Score = 56.2 bits (134), Expect(2) = 3e-09
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -3

Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           + +++RQ+   +G + KADG AIFEMGNTKV+ AVYGP EV
Sbjct: 15  RPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREV 55



 Score = 30.8 bits (68), Expect(2) = 3e-09
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           ME++SPEGL LDGRR
Sbjct: 1   MEYVSPEGLRLDGRR 15


>ref|XP_002320845.1| exonuclease RRP41 family protein [Populus trichocarpa]
           gi|118489833|gb|ABK96716.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222861618|gb|EEE99160.1|
           exonuclease RRP41 family protein [Populus trichocarpa]
          Length = 241

 Score = 55.8 bits (133), Expect(2) = 3e-09
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -3

Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           + +++RQL   +G + KADG A+FEMGNTKV+ AVYGP EV
Sbjct: 15  RPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREV 55



 Score = 30.8 bits (68), Expect(2) = 3e-09
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           MEF++PEGL LDGRR
Sbjct: 1   MEFVNPEGLRLDGRR 15


>ref|XP_006443538.1| hypothetical protein CICLE_v10021944mg [Citrus clementina]
           gi|568851047|ref|XP_006479205.1| PREDICTED: exosome
           complex component RRP41-like isoform X1 [Citrus
           sinensis] gi|568851049|ref|XP_006479206.1| PREDICTED:
           exosome complex component RRP41-like isoform X2 [Citrus
           sinensis] gi|557545800|gb|ESR56778.1| hypothetical
           protein CICLE_v10021944mg [Citrus clementina]
          Length = 241

 Score = 53.5 bits (127), Expect(2) = 7e-09
 Identities = 24/38 (63%), Positives = 30/38 (78%)
 Frame = -3

Query: 114 QLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           ++RQL   +G + KADG A+FEMGNTKV+ AVYGP EV
Sbjct: 18  EMRQLRAEIGNVAKADGSAVFEMGNTKVIAAVYGPREV 55



 Score = 32.0 bits (71), Expect(2) = 7e-09
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           MEF+SPEGL LDGRR
Sbjct: 1   MEFVSPEGLRLDGRR 15


>gb|EOX95793.1| 3'-5'-exoribonuclease family protein isoform 1 [Theobroma cacao]
          Length = 316

 Score = 53.9 bits (128), Expect(2) = 1e-08
 Identities = 22/41 (53%), Positives = 32/41 (78%)
 Frame = -3

Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           + +++RQ+   +G + +ADG A+FEMGNTKV+ AVYGP EV
Sbjct: 90  RPMEMRQIRAEIGTVARADGSAVFEMGNTKVIAAVYGPREV 130



 Score = 30.8 bits (68), Expect(2) = 1e-08
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           ME++SPEGL LDGRR
Sbjct: 76  MEYVSPEGLRLDGRR 90


>ref|XP_006291576.1| hypothetical protein CARUB_v10017729mg, partial [Capsella rubella]
           gi|482560283|gb|EOA24474.1| hypothetical protein
           CARUB_v10017729mg, partial [Capsella rubella]
          Length = 299

 Score = 55.1 bits (131), Expect(2) = 1e-08
 Identities = 24/38 (63%), Positives = 31/38 (81%)
 Frame = -3

Query: 114 QLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           ++RQ+   VGV+ KADG A+FEMGNTKV+ AVYGP E+
Sbjct: 76  EMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREI 113



 Score = 29.6 bits (65), Expect(2) = 1e-08
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           ME+++PEGL LDGRR
Sbjct: 59  MEYVNPEGLRLDGRR 73


>gb|EXC22513.1| Exosome complex component [Morus notabilis]
          Length = 260

 Score = 53.9 bits (128), Expect(2) = 1e-08
 Identities = 24/38 (63%), Positives = 30/38 (78%)
 Frame = -3

Query: 114 QLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           +LRQ+   +G + KADG A+FEMGNTKV+ AVYGP EV
Sbjct: 18  ELRQIRAELGAVAKADGSAVFEMGNTKVIAAVYGPREV 55



 Score = 30.8 bits (68), Expect(2) = 1e-08
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           MEF++PEGL LDGRR
Sbjct: 1   MEFVNPEGLRLDGRR 15


>ref|XP_006339670.1| PREDICTED: exosome complex component RRP41-like isoform X1 [Solanum
           tuberosum] gi|565345171|ref|XP_006339671.1| PREDICTED:
           exosome complex component RRP41-like isoform X2 [Solanum
           tuberosum]
          Length = 243

 Score = 55.1 bits (131), Expect(2) = 1e-08
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -3

Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           + +++RQL   +GV+ +ADG A FEMGNTKV+ AVYGP EV
Sbjct: 15  RPMEMRQLRAEIGVVSRADGSASFEMGNTKVIAAVYGPREV 55



 Score = 29.6 bits (65), Expect(2) = 1e-08
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           ME+++PEGL LDGRR
Sbjct: 1   MEYVNPEGLRLDGRR 15


>ref|XP_004229977.1| PREDICTED: exosome complex component RRP41-like [Solanum
           lycopersicum]
          Length = 243

 Score = 55.1 bits (131), Expect(2) = 1e-08
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -3

Query: 123 KTLQLRQLNG*VGVIDKADGFAIFEMGNTKVMVAVYGPHEV 1
           + +++RQL   +GV+ +ADG A FEMGNTKV+ AVYGP EV
Sbjct: 15  RPMEMRQLRAEIGVVSRADGSASFEMGNTKVIAAVYGPREV 55



 Score = 29.6 bits (65), Expect(2) = 1e-08
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = -1

Query: 164 MEFISPEGLHLDGRR 120
           ME+++PEGL LDGRR
Sbjct: 1   MEYVNPEGLRLDGRR 15


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