BLASTX nr result

ID: Ephedra27_contig00030835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00030835
         (352 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24133.3| unnamed protein product [Vitis vinifera]               49   2e-08
ref|XP_006832890.1| hypothetical protein AMTR_s00095p00111310 [A...    54   6e-06

>emb|CBI24133.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score = 48.5 bits (114), Expect(2) = 2e-08
 Identities = 20/30 (66%), Positives = 27/30 (90%)
 Frame = -1

Query: 91  PDMGILLSGCQSNETSADACPTGNLSEAFG 2
           PD GIL+SGCQ+++TSADA P+GN +EA+G
Sbjct: 286 PDNGILISGCQTDQTSADASPSGNSAEAYG 315



 Score = 35.4 bits (80), Expect(2) = 2e-08
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = -3

Query: 350 EVLKERSGDKTLQLSNINEAVFKVFGDRASPSIKKSASFSVVASPKPKDG--DTKDDSVK 177
           E+LK+++G   + +  +   +F VFG+ ASP +KK   F  V   K + G  +  +D  K
Sbjct: 207 EILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKK---FMNVVMNKLQQGGEENNEDYAK 263

Query: 176 SA 171
            A
Sbjct: 264 PA 265


>ref|XP_006832890.1| hypothetical protein AMTR_s00095p00111310 [Amborella trichopoda]
           gi|548837390|gb|ERM98168.1| hypothetical protein
           AMTR_s00095p00111310 [Amborella trichopoda]
          Length = 313

 Score = 53.9 bits (128), Expect(2) = 6e-06
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = -1

Query: 91  PDMGILLSGCQSNETSADACPTGNLSEAFG 2
           PD+GILLSGCQSNETSADA P G++S+AFG
Sbjct: 226 PDVGILLSGCQSNETSADAFPDGDISKAFG 255



 Score = 21.6 bits (44), Expect(2) = 6e-06
 Identities = 12/49 (24%), Positives = 20/49 (40%)
 Frame = -3

Query: 347 VLKERSGDKTLQLSNINEAVFKVFGDRASPSIKKSASFSVVASPKPKDG 201
           +L   +    L    I   + ++FGD+A    +   SFS +    P  G
Sbjct: 181 ILNHLAAASGLNSQEITYHLHQLFGDKAFFRFESKESFSALKPASPDVG 229


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