BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00030733
         (555 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001761392.1| predicted protein [Physcomitrella patens] gi...   108   1e-21
gb|EMJ05367.1| hypothetical protein PRUPE_ppa017537mg [Prunus pe...   107   1e-21
ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
gb|ABR17838.1| unknown [Picea sitchensis]                             107   2e-21
ref|XP_006357349.1| PREDICTED: pentatricopeptide repeat-containi...   106   4e-21
ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containi...   106   4e-21
gb|ESW12037.1| hypothetical protein PHAVU_008G079600g [Phaseolus...   105   6e-21
ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containi...   105   6e-21
ref|XP_006487970.1| PREDICTED: pentatricopeptide repeat-containi...   105   7e-21
gb|EOY07940.1| Tetratricopeptide repeat-like superfamily protein...   105   7e-21
ref|XP_004304914.1| PREDICTED: pentatricopeptide repeat-containi...   105   9e-21
ref|XP_004242257.1| PREDICTED: pentatricopeptide repeat-containi...   105   9e-21
ref|XP_003623648.1| Pentatricopeptide repeat-containing protein ...   105   9e-21
gb|EXB25868.1| hypothetical protein L484_012294 [Morus notabilis...   104   1e-20
ref|XP_004492592.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygr...   104   1e-20
ref|XP_002986340.1| hypothetical protein SELMODRAFT_123858 [Sela...   104   1e-20
ref|XP_002316137.1| pentatricopeptide repeat-containing family p...   104   1e-20
ref|XP_004295870.1| PREDICTED: pentatricopeptide repeat-containi...   104   2e-20

>ref|XP_001761392.1| predicted protein [Physcomitrella patens]
           gi|162687398|gb|EDQ73781.1| predicted protein
           [Physcomitrella patens]
          Length = 833

 Score =  108 bits (269), Expect = 1e-21
 Identities = 47/78 (60%), Positives = 58/78 (74%)
 Frame = -3

Query: 553 QHKENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRD 374
           Q KE  +SYHSE LA+++G+L    G P+RI+ NL VCS+CHS+ K ISK+  REII RD
Sbjct: 756 QQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARD 815

Query: 373 PSRFHHFKEGRCSCADQW 320
            SRFHHFK+G CSC D W
Sbjct: 816 ASRFHHFKDGVCSCGDYW 833


>gb|EMJ05367.1| hypothetical protein PRUPE_ppa017537mg [Prunus persica]
          Length = 631

 Score =  107 bits (268), Expect = 1e-21
 Identities = 44/78 (56%), Positives = 61/78 (78%)
 Frame = -3

Query: 553 QHKENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRD 374
           + K + + YHSE LA+++GLL+  QGMP+R+  NL +C +CHS+ KLISK++ RE+ILRD
Sbjct: 554 EEKAHSLGYHSEKLAIAYGLLKVPQGMPIRVMKNLRICGDCHSAIKLISKVMGREVILRD 613

Query: 373 PSRFHHFKEGRCSCADQW 320
            +RFHHFK+G CSC D W
Sbjct: 614 ANRFHHFKDGLCSCRDYW 631


>ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  107 bits (267), Expect = 2e-21
 Identities = 48/76 (63%), Positives = 58/76 (76%)
 Frame = -3

Query: 547 KENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRDPS 368
           KE I+ YHSE LA++FGLL T +   LRI  NL VC++CHS+ K ISKLV REII+RD +
Sbjct: 707 KEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDAT 766

Query: 367 RFHHFKEGRCSCADQW 320
           RFHHFK+G CSC D W
Sbjct: 767 RFHHFKDGSCSCRDYW 782


>ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  107 bits (267), Expect = 2e-21
 Identities = 48/76 (63%), Positives = 58/76 (76%)
 Frame = -3

Query: 547 KENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRDPS 368
           KE I+ YHSE LA++FGLL T +   LRI  NL VC++CHS+ K ISKLV REII+RD +
Sbjct: 707 KEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDAT 766

Query: 367 RFHHFKEGRCSCADQW 320
           RFHHFK+G CSC D W
Sbjct: 767 RFHHFKDGSCSCRDYW 782


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  107 bits (266), Expect = 2e-21
 Identities = 47/76 (61%), Positives = 60/76 (78%)
 Frame = -3

Query: 547 KENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRDPS 368
           KENI+S HSE LA+SFG++ T+ G+P+RI  NL VCS+CH++ K ISK+V REII+RD +
Sbjct: 720 KENILSSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDAN 779

Query: 367 RFHHFKEGRCSCADQW 320
           RFHH K G CSC D W
Sbjct: 780 RFHHVKNGFCSCGDYW 795


>ref|XP_006357349.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like isoform X1 [Solanum tuberosum]
            gi|565382025|ref|XP_006357350.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like isoform X2 [Solanum tuberosum]
            gi|565382027|ref|XP_006357351.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like isoform X3 [Solanum tuberosum]
          Length = 918

 Score =  106 bits (264), Expect = 4e-21
 Identities = 44/78 (56%), Positives = 61/78 (78%)
 Frame = -3

Query: 553  QHKENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRD 374
            + KE ++SYHSE LA++FGL+ T  G P+R+  NL +C +CH++FK I K+V+REII+RD
Sbjct: 841  RQKEILLSYHSEKLAVAFGLIVTPPGAPIRVKKNLRICLDCHTAFKFICKIVSREIIIRD 900

Query: 373  PSRFHHFKEGRCSCADQW 320
             +RFHHFK+G CSC D W
Sbjct: 901  INRFHHFKDGSCSCGDYW 918


>ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  106 bits (264), Expect = 4e-21
 Identities = 44/78 (56%), Positives = 60/78 (76%)
 Frame = -3

Query: 553 QHKENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRD 374
           + K + + YHSE LA+++GLL+  +GMP+R+  NL VC +CHS+ KLI+K+  REIILRD
Sbjct: 634 EEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRD 693

Query: 373 PSRFHHFKEGRCSCADQW 320
            +RFHHFK+G CSC D W
Sbjct: 694 ANRFHHFKDGHCSCKDYW 711


>gb|ESW12037.1| hypothetical protein PHAVU_008G079600g [Phaseolus vulgaris]
          Length = 709

 Score =  105 bits (263), Expect = 6e-21
 Identities = 44/78 (56%), Positives = 60/78 (76%)
 Frame = -3

Query: 553 QHKENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRD 374
           + K + + YHSE LA+++GLL+  +GMP+R+  NL VC +CHS+ KLI+K+  REIILRD
Sbjct: 632 EEKTHSLGYHSEKLAVAYGLLKVPKGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRD 691

Query: 373 PSRFHHFKEGRCSCADQW 320
            +RFHHFK+G CSC D W
Sbjct: 692 ANRFHHFKDGHCSCKDYW 709


>ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 632

 Score =  105 bits (263), Expect = 6e-21
 Identities = 45/78 (57%), Positives = 62/78 (79%)
 Frame = -3

Query: 553 QHKENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRD 374
           + KE+ +S HSE LAL+FGL+ T++G  +RI  NL VC++CH + K+ISK+V REI++RD
Sbjct: 555 EEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRD 614

Query: 373 PSRFHHFKEGRCSCADQW 320
            SRFHHFK+G+CSC D W
Sbjct: 615 RSRFHHFKDGKCSCNDYW 632


>ref|XP_006487970.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
            [Citrus sinensis]
          Length = 873

 Score =  105 bits (262), Expect = 7e-21
 Identities = 47/78 (60%), Positives = 59/78 (75%)
 Frame = -3

Query: 553  QHKENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRD 374
            +HKE I+S HSE LA++FGL+ T  G PL+I  NL VC +CH+  KLISKL  R+I++RD
Sbjct: 796  EHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRD 855

Query: 373  PSRFHHFKEGRCSCADQW 320
             +RFHHFKEG CSC D W
Sbjct: 856  TNRFHHFKEGLCSCGDYW 873


>gb|EOY07940.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 756

 Score =  105 bits (262), Expect = 7e-21
 Identities = 47/78 (60%), Positives = 59/78 (75%)
 Frame = -3

Query: 553 QHKENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRD 374
           + KE++VSYHSE LAL+FGL+  + G  LRI  NL VC +CHS+FKL+S++  REII+RD
Sbjct: 679 EEKESVVSYHSEKLALAFGLVNASPGETLRIMKNLRVCGDCHSAFKLLSEMYRREIIVRD 738

Query: 373 PSRFHHFKEGRCSCADQW 320
             RFHHFK G CSC D W
Sbjct: 739 AIRFHHFKNGSCSCKDFW 756


>ref|XP_004304914.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 703

 Score =  105 bits (261), Expect = 9e-21
 Identities = 44/78 (56%), Positives = 59/78 (75%)
 Frame = -3

Query: 553 QHKENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRD 374
           + K   + YHSE LA+++GLL+  QGMP+R+  NL VC +CHS+ KLI+K+  REII+RD
Sbjct: 626 EEKVQSLGYHSEKLAIAYGLLKVPQGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRD 685

Query: 373 PSRFHHFKEGRCSCADQW 320
            +RFHHFK+G CSC D W
Sbjct: 686 ANRFHHFKDGLCSCRDYW 703


>ref|XP_004242257.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
            mitochondrial-like [Solanum lycopersicum]
          Length = 1224

 Score =  105 bits (261), Expect = 9e-21
 Identities = 46/78 (58%), Positives = 61/78 (78%)
 Frame = -3

Query: 553  QHKENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRD 374
            + K + ++YHSE LA+++GLL+  QGMP+RI  NL VC +CHS+ KLI+K+  REIILRD
Sbjct: 1147 EEKLHSLNYHSEKLAVAYGLLKLPQGMPIRIMKNLRVCGDCHSAIKLIAKVTGREIILRD 1206

Query: 373  PSRFHHFKEGRCSCADQW 320
             +RFHHFK+G CSC D W
Sbjct: 1207 ANRFHHFKDGVCSCKDFW 1224


>ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498663|gb|AES79866.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  105 bits (261), Expect = 9e-21
 Identities = 44/78 (56%), Positives = 60/78 (76%)
 Frame = -3

Query: 553 QHKENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRD 374
           + K + + YHSE LA+++GLL+  +GMP+R+  NL VC +CHS+ KLI+K+  REIILRD
Sbjct: 630 EEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRD 689

Query: 373 PSRFHHFKEGRCSCADQW 320
            +RFHHFK+G CSC D W
Sbjct: 690 ANRFHHFKDGSCSCKDFW 707


>gb|EXB25868.1| hypothetical protein L484_012294 [Morus notabilis]
           gi|587990941|gb|EXC75162.1| hypothetical protein
           L484_000356 [Morus notabilis]
          Length = 773

 Score =  104 bits (260), Expect = 1e-20
 Identities = 45/78 (57%), Positives = 57/78 (73%)
 Frame = -3

Query: 553 QHKENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRD 374
           + KEN++ YHSE LA++F +L T  G P+R+  NL VC +CHS+FK+ISK+V R IILRD
Sbjct: 696 EEKENMLKYHSEKLAVAFAILSTPPGRPIRVMKNLRVCEDCHSAFKIISKIVGRLIILRD 755

Query: 373 PSRFHHFKEGRCSCADQW 320
             RFHHF  G CSC D W
Sbjct: 756 SYRFHHFSGGSCSCGDYW 773


>ref|XP_004492592.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cicer arietinum]
          Length = 707

 Score =  104 bits (260), Expect = 1e-20
 Identities = 44/78 (56%), Positives = 60/78 (76%)
 Frame = -3

Query: 553 QHKENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRD 374
           + K + + YHSE LA+++GLL+  +GMP+R+  NL VC +CHS+ KLI+K+  REIILRD
Sbjct: 630 EEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRD 689

Query: 373 PSRFHHFKEGRCSCADQW 320
            +RFHHFK+G CSC D W
Sbjct: 690 ANRFHHFKDGYCSCKDFW 707


>gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  104 bits (260), Expect = 1e-20
 Identities = 46/78 (58%), Positives = 55/78 (70%)
 Frame = -3

Query: 553 QHKENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRD 374
           Q KE  +SYHSE LA+++G+L    G P+RI  NL VC +CHS+ K ISK+  REII RD
Sbjct: 760 QEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARD 819

Query: 373 PSRFHHFKEGRCSCADQW 320
            SRFHHFK G CSC D W
Sbjct: 820 ASRFHHFKNGVCSCGDYW 837


>ref|XP_002986340.1| hypothetical protein SELMODRAFT_123858 [Selaginella moellendorffii]
           gi|300145876|gb|EFJ12549.1| hypothetical protein
           SELMODRAFT_123858 [Selaginella moellendorffii]
          Length = 203

 Score =  104 bits (260), Expect = 1e-20
 Identities = 44/78 (56%), Positives = 56/78 (71%)
 Frame = -3

Query: 553 QHKENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRD 374
           + KE ++ YHSE +A++FGL+ T QG PLRI  NL VC +CHS+ K +SK+V R I +RD
Sbjct: 126 EQKEELLHYHSEKMAVAFGLISTEQGSPLRILKNLRVCGDCHSAIKFVSKMVGRSITVRD 185

Query: 373 PSRFHHFKEGRCSCADQW 320
            SRFHHF  G CSC D W
Sbjct: 186 ASRFHHFSNGTCSCGDYW 203


>ref|XP_002316137.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222865177|gb|EEF02308.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 601

 Score =  104 bits (260), Expect = 1e-20
 Identities = 47/78 (60%), Positives = 57/78 (73%)
 Frame = -3

Query: 553 QHKENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRD 374
           + KE  + YHSE LA+SFGLL T  G  +R+  NL VC +CHS+ KLIS L+ REIILRD
Sbjct: 524 EEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISSLIDREIILRD 583

Query: 373 PSRFHHFKEGRCSCADQW 320
             RFHHFK+G+CSC D W
Sbjct: 584 VQRFHHFKDGKCSCGDYW 601


>ref|XP_004295870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Fragaria vesca subsp. vesca]
          Length = 729

 Score =  104 bits (259), Expect = 2e-20
 Identities = 45/78 (57%), Positives = 61/78 (78%)
 Frame = -3

Query: 553 QHKENIVSYHSEMLALSFGLLETTQGMPLRIHNNLVVCSECHSSFKLISKLVAREIILRD 374
           + KE+ +S HSE LA++FGL+ T+ G  +RI  NL +C++CH + KLISK+V REII+RD
Sbjct: 652 EEKEDALSVHSEKLAIAFGLISTSPGTTIRIVKNLRICNDCHDATKLISKIVEREIIVRD 711

Query: 373 PSRFHHFKEGRCSCADQW 320
            SRFHHFK+G+CSC D W
Sbjct: 712 RSRFHHFKDGKCSCNDYW 729