BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00030716
         (518 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB73912.1| polyprotein [Citrus sinensis]                           81   2e-13
gb|AFB73911.1| polyprotein [Citrus sinensis]                           80   2e-13
emb|CCH50966.1| T4.5 [Malus x robusta]                                 75   7e-12
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]               75   7e-12
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]               75   7e-12
ref|XP_003381524.1| putative integrase core domain protein [Tric...    75   1e-11
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...    75   1e-11
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]               73   3e-11
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                              70   3e-10
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    69   5e-10
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]               69   7e-10
emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]    69   9e-10
ref|XP_005715938.1| unnamed protein product [Chondrus crispus] g...    68   1e-09
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi...    68   1e-09
gb|ACY01936.1| hypothetical protein [Beta vulgaris]                    67   2e-09
ref|XP_005717319.1| RNA-dependent DNA polymerase [Chondrus crisp...    67   3e-09
emb|CBI25270.3| unnamed protein product [Vitis vinifera]               67   3e-09
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]    67   3e-09
ref|XP_005714350.1| unnamed protein product [Chondrus crispus] g...    66   4e-09
gb|EMJ27942.1| hypothetical protein PRUPE_ppa019101mg, partial [...    66   6e-09

>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 43/141 (30%), Positives = 78/141 (55%)
 Frame = +2

Query: 5   NYHSWKVKMSNILKGNNLLDIITFPPPGNPNDNWIKKNNFAAMSISLSLSDELTPHIDGQ 184
           N+  WK+KM  +L+ NN L  I   P    +D W + ++ A   + L+L+D +   +  +
Sbjct: 14  NFSLWKMKMKAVLRKNNCLAAIGERPMEITDDKWNEVDSNAISDLHLALADGVLSSVAEK 73

Query: 185 NSAYLMWQTLANIFDKKNSAKLRSLKDKLDTLRLPEESTVTELISAVLSLQKQILAQGEN 364
           N+A  +W TL  +++ K+      LK KL TLR+ E + VT+ I+ + +L  Q+   G N
Sbjct: 74  NTAKEIWDTLTKLYEAKSLHNKIFLKRKLYTLRMAESTMVTDHINTLKTLFSQLTTLGHN 133

Query: 365 IKDEDMVYYTLKALPSKFDKM 427
           I++ +     L++LP  +D++
Sbjct: 134 IEENERAELLLQSLPDSYDQL 154


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 43/141 (30%), Positives = 77/141 (54%)
 Frame = +2

Query: 5   NYHSWKVKMSNILKGNNLLDIITFPPPGNPNDNWIKKNNFAAMSISLSLSDELTPHIDGQ 184
           N+  WK+KM  +L+ NN L  I   P    +D W + +  A   + L+L+D +   +  +
Sbjct: 14  NFSLWKMKMKAVLRKNNCLAAIGERPMEITDDKWNEVDGNAISDLHLALADGVLSSVAEK 73

Query: 185 NSAYLMWQTLANIFDKKNSAKLRSLKDKLDTLRLPEESTVTELISAVLSLQKQILAQGEN 364
           N+A  +W TL  +++ K+      LK KL TLR+ E + VT+ I+ + +L  Q+   G N
Sbjct: 74  NTAKEIWDTLTKLYEAKSLHNKIFLKRKLYTLRMAESTMVTDHINTLKTLFSQLTTLGHN 133

Query: 365 IKDEDMVYYTLKALPSKFDKM 427
           I++ +     L++LP  +D++
Sbjct: 134 IEENERAELLLQSLPDSYDQL 154


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 47/186 (25%), Positives = 93/186 (50%), Gaps = 15/186 (8%)
 Frame = +2

Query: 2   QNYHSWKVKMSNILKGNNLLDIIT----FPPP------GN--PN---DNWIKKNNFAAMS 136
           QNY +W+     +LK   L+ ++      PPP      G   PN   + W +++    + 
Sbjct: 281 QNYITWRSLFIPVLKRFKLIGLVNGEDLCPPPFVRDPSGTCVPNASFETWCERDQILMIW 340

Query: 137 ISLSLSDELTPHIDGQNSAYLMWQTLANIFDKKNSAKLRSLKDKLDTLRLPEESTVTELI 316
           I+ +LS +L P   G   +  +WQ+L   F   +   + SL+ K+ T+    +S++T+ +
Sbjct: 341 INSTLSKDLLPLTIGMEDSRSLWQSLERRFSGASRTHVHSLRSKIQTIH-KGDSSMTDFL 399

Query: 317 SAVLSLQKQILAQGENIKDEDMVYYTLKALPSKFDKMKETLDDLGIHFTFEELCNKLYTK 496
           +++  +  ++ A GE + + D+V Y L  LP +++   ++++      T +EL   L +K
Sbjct: 400 NSIKEISNKLAAAGEPLSESDLVAYILSGLPDEYESFVDSIETRNESVTADELHGLLLSK 459

Query: 497 EARLQQ 514
           E  LQ+
Sbjct: 460 EISLQK 465


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 2/170 (1%)
 Frame = +2

Query: 2   QNYHSWKVKMSNILKGNNLLDIITFPPPGNPNDNWIKKNNFAAMSISLSLSDELTPHIDG 181
           +N+  WK+K+  IL+ +N LD I   P    ++ W + ++ A  ++ L+++D +   I  
Sbjct: 13  RNFSLWKLKIRAILRKDNCLDAIDGRPADITDEKWKEMDDNAVANLHLAMADSVLSSIAE 72

Query: 182 QNSAYLMWQTLANIFDKKNSAKLRSLKDKLDTLRLPEESTVTELISAVLSLQKQILAQGE 361
           + +A  +W TL  +++ K+      LK +L TLR+ E ++VT+ I+ + +L  Q+ A   
Sbjct: 73  KKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRMGESTSVTDHINTLNTLFSQLTASDF 132

Query: 362 NIKDEDMVYYTLKALPSKFDKMKETLDDLGIHFT--FEELCNKLYTKEAR 505
            I + +     L++LP  +D++   + +  I  T  F+++   +  +E+R
Sbjct: 133 KIAENERAELLLQSLPDSYDQLIINITNNNITDTLHFDDVAGAILEEESR 182


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 2/170 (1%)
 Frame = +2

Query: 2   QNYHSWKVKMSNILKGNNLLDIITFPPPGNPNDNWIKKNNFAAMSISLSLSDELTPHIDG 181
           +N+  WK+K+  IL+ +N LD I   P    ++ W + ++ A  ++ L+++D +   I  
Sbjct: 13  RNFSLWKLKIRAILRKDNCLDAIDGRPADITDEKWKEMDDNAVANLHLAMADSVLSSIAE 72

Query: 182 QNSAYLMWQTLANIFDKKNSAKLRSLKDKLDTLRLPEESTVTELISAVLSLQKQILAQGE 361
           + +A  +W TL  +++ K+      LK +L TLR+ E ++VT+ I+ + +L  Q+ A   
Sbjct: 73  KKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRMGESTSVTDHINTLNTLFSQLTASDF 132

Query: 362 NIKDEDMVYYTLKALPSKFDKMKETLDDLGIHFT--FEELCNKLYTKEAR 505
            I + +     L++LP  +D++   + +  I  T  F+++   +  +E+R
Sbjct: 133 KIAENERAELLLQSLPDSYDQLIINITNNNIADTLHFDDVAGAILEEESR 182


>ref|XP_003381524.1| putative integrase core domain protein [Trichinella spiralis]
           gi|316979667|gb|EFV62422.1| putative integrase core
           domain protein [Trichinella spiralis]
          Length = 1133

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 43/146 (29%), Positives = 75/146 (51%)
 Frame = +2

Query: 5   NYHSWKVKMSNILKGNNLLDIITFPPPGNPNDNWIKKNNFAAMSISLSLSDELTPHIDGQ 184
           NY  WK+KM  +L  + L D+++ P P    ++W +K   A  +I L++ D+   H+   
Sbjct: 22  NYQLWKLKMKVLLMRDGLWDLVSQPKPCPIPEDWSRKECKAIAAICLTVEDDQLIHLAQL 81

Query: 185 NSAYLMWQTLANIFDKKNSAKLRSLKDKLDTLRLPEESTVTELISAVLSLQKQILAQGEN 364
            +A  MWQTL  + ++ +      L  KL  +R     T+   I+ +L +  Q+   G+N
Sbjct: 82  ETAREMWQTLQRLHERASIGSKLYLMRKLYGMRF-THGTMKSHINGILEIVTQLRGLGKN 140

Query: 365 IKDEDMVYYTLKALPSKFDKMKETLD 442
           I+DED+V   L +LP  +  +   L+
Sbjct: 141 IEDEDLVAIMLCSLPDSYSALVTALE 166


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
 Frame = +2

Query: 2   QNYHSWKVKMSNILKGNNLLDII-TFPPPGNPND--NWIKKNNFAAMSISLSLSDELTPH 172
           +NY  W +KM  + K   L DI+ T  P GN N      K+++ A  +I  +L DE+ P 
Sbjct: 20  ENYQFWSLKMKTLFKSQELWDIVETGIPEGNANQMREHRKRDSKALFTIQQALDDEIFPR 79

Query: 173 IDGQNSAYLMWQTLANIF---DKKNSAKLRSLKDKLDTLRLPEESTVTELISAVLSLQKQ 343
           I    ++   W+ L   +   DK  + KL++L+   +TL + E  +V   +S   ++  +
Sbjct: 80  ISAVETSKQAWEILKQEYFGDDKVITVKLQTLRRDFETLFMNENESVQGYLSRTSAIVNR 139

Query: 344 ILAQGENIKDEDMVYYTLKALPSKFDKMKETLD---DLGIHFTFEELCNKLYTKEARLQQ 514
           + + GE I ++ +V   L++L +KF+ +   ++   DL   ++F+EL + L   E RL +
Sbjct: 140 MRSYGEKIDNQIVVSKVLRSLTTKFEHVVTAIEESKDLST-YSFDELMSSLLAHEDRLNR 198


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 43/170 (25%), Positives = 91/170 (53%), Gaps = 2/170 (1%)
 Frame = +2

Query: 2   QNYHSWKVKMSNILKGNNLLDIITFPPPGNPNDNWIKKNNFAAMSISLSLSDELTPHIDG 181
           + +  WK+K+  IL+ +N LD I   P    ++ W + ++ A  ++ L+++D +   I  
Sbjct: 13  RKFSLWKLKIRAILRKDNCLDAIDGRPADITDEKWKEMDDNAVANLHLAMADSVLSSIAE 72

Query: 182 QNSAYLMWQTLANIFDKKNSAKLRSLKDKLDTLRLPEESTVTELISAVLSLQKQILAQGE 361
           + +A  +W TL  +++ K+      LK +L TLR+ E ++VT+ I+ + +L  Q+ A   
Sbjct: 73  KKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRMGESTSVTDHINTLNTLFSQLTASDF 132

Query: 362 NIKDEDMVYYTLKALPSKFDKMKETLDDLGIHFT--FEELCNKLYTKEAR 505
            I + +     L++LP  +D++   + +  I  T  F+++   +  +E+R
Sbjct: 133 KIAENERAELLLQSLPDSYDQLIINITNNNIADTLHFDDVAGAILEEESR 182


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 45/171 (26%), Positives = 91/171 (53%), Gaps = 3/171 (1%)
 Frame = +2

Query: 2   QNYHSWKVKMSNILKGNNLLDIITFPPPGNPNDN-WIKKNNFAAMSISLSLSDELTPHID 178
           +N+  WK+K+  IL+ +N L  I+  P    +D  W + N  A   + LS++D +   I+
Sbjct: 13  KNFSLWKLKVKAILRKDNCLAAISERPVDFTDDKKWSEMNEDAMADLYLSIADGVLSSIE 72

Query: 179 GQNSAYLMWQTLANIFDKKNSAKLRSLKDKLDTLRLPEESTVTELISAVLSLQKQILAQG 358
            + +A  +W  L  +++ K+      LK KL TLR+ E ++VTE ++ + +L  Q+ +  
Sbjct: 73  EKKTANEIWDHLNRLYEAKSLHNKIFLKRKLYTLRMSESTSVTEHLNTLNTLFSQLTSLS 132

Query: 359 ENIKDEDMVYYTLKALPSKFDKMKETLDD--LGIHFTFEELCNKLYTKEAR 505
             I+ ++     L++LP  +D++   L +  L  +  F+++   +  +E+R
Sbjct: 133 CKIEPQERAELLLQSLPDSYDQLIINLTNNILTDYLVFDDVAAAVLEEESR 183


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 11/180 (6%)
 Frame = +2

Query: 8   YHSWKVKMSNILKGNNLLDIIT--FPPPGNP---NDNWIKKNNFAAMSISLSLSDELTPH 172
           Y  W +KM  + K  +L D++   +P P       +N  KK++ A   I  ++ + +   
Sbjct: 24  YEFWSIKMKTLFKSQDLWDLVENGYPYPDEEARLKEN-TKKDSKALFFIQQAVHESIFSK 82

Query: 173 IDGQNSAYLMWQTLANIFD---KKNSAKLRSLKDKLDTLRLPEESTVTELISAVLSLQKQ 343
           I    +A   W TL   F    K  + KL+SL+   +TL +    +V + +S V ++  Q
Sbjct: 83  IAAXTTAKEAWTTLKTAFQGSSKVITVKLQSLRRDFETLHMKNGESVQDFLSRVAAIVNQ 142

Query: 344 ILAQGENIKDEDMVYYTLKALPSKFDKMKETLD---DLGIHFTFEELCNKLYTKEARLQQ 514
           + + GE+I D+ +V   L++L  KFD +   ++   DL   ++F+EL   L + E RL +
Sbjct: 143 MRSYGEDILDQTVVAKVLRSLTPKFDHVVAAIEESKDLST-YSFDELMGSLQSHEVRLSR 201


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 42/170 (24%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
 Frame = +2

Query: 2   QNYHSWKVKMSNILKGNNLLDIITFPPPGNPNDNWIKKNNFAAMSISLSLSDELTPHIDG 181
           +N+  WK+K+  IL+ +N LD I        ++ W + ++ A  ++ L+++D +   I  
Sbjct: 13  RNFSLWKLKIRAILRKDNCLDAIDGRLADITDEKWKEMDDNAVANLHLAMADSVLSSIAE 72

Query: 182 QNSAYLMWQTLANIFDKKNSAKLRSLKDKLDTLRLPEESTVTELISAVLSLQKQILAQGE 361
           + +A  +W TL  +++ K+      LK +L TL++ E ++VT+ I+ + +L  Q+ A   
Sbjct: 73  KKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLQMGESTSVTDHINTLNTLFSQLTASDF 132

Query: 362 NIKDEDMVYYTLKALPSKFDKMKETLDDLGIHFT--FEELCNKLYTKEAR 505
            I   +     L++LP  +D++   + +  I  T  F+++   +  +E+R
Sbjct: 133 KIAKNERAELLLQSLPDSYDQLIINITNNNIADTLHFDDVAGAILEEESR 182


>emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]
          Length = 1269

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 14/185 (7%)
 Frame = +2

Query: 5   NYHSWKVKMSNILKGNNLLDIITFPPPGNPN--------------DNWIKKNNFAAMSIS 142
           NY SWK +M  IL G +L   I    P  P                 W++++     ++ 
Sbjct: 22  NYFSWKTQMEAILIGYDLQKFIDGSHPAPPTTITTNNVVSTNPAYQTWLRQDKLLFGALV 81

Query: 143 LSLSDELTPHIDGQNSAYLMWQTLANIFDKKNSAKLRSLKDKLDTLRLPEESTVTELISA 322
            +LS  L P I    ++Y  WQ LAN + + +   ++ LKD L  +    +S + + + +
Sbjct: 82  DTLSPTLVPLITQSKTSYEAWQILANTYARPSRGHIKQLKDHLKNITKGSQS-IXDYMXS 140

Query: 323 VLSLQKQILAQGENIKDEDMVYYTLKALPSKFDKMKETLDDLGIHFTFEELCNKLYTKEA 502
           + +   ++ A G+ +  ED++   L  L   +  + + ++      +F+EL  KL  KE 
Sbjct: 141 IKTRADELAALGKPLDQEDLIEKVLXGLDENYQSIIDAVNGRDSTISFDELHEKLINKEL 200

Query: 503 RLQQE 517
            L+ +
Sbjct: 201 SLRNK 205


>ref|XP_005715938.1| unnamed protein product [Chondrus crispus]
           gi|507112437|emb|CDF36119.1| unnamed protein product
           [Chondrus crispus]
          Length = 753

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 8/179 (4%)
 Frame = +2

Query: 5   NYHSWKVKMSNILKGNNLLDIITFPPPGN-PNDN-------WIKKNNFAAMSISLSLSDE 160
           N++ WK K+  +L    L D+  +   G  P++        WI+ ++ A   I LSLSDE
Sbjct: 19  NFYVWKQKIQLLLA---LRDVDQYIVEGRVPSEERAEERKKWIRGDSKAKALIGLSLSDE 75

Query: 161 LTPHIDGQNSAYLMWQTLANIFDKKNSAKLRSLKDKLDTLRLPEESTVTELISAVLSLQK 340
              H+   +SA+ MW+ + N+F++       + + +  T+++     V   I+ V  L  
Sbjct: 76  HLEHVRDVDSAHEMWEAIVNVFERHTLLNKLAARREFYTVKMLSGEKVLAYINRVKQLAA 135

Query: 341 QILAQGENIKDEDMVYYTLKALPSKFDKMKETLDDLGIHFTFEELCNKLYTKEARLQQE 517
            + +   NI D++M    L  LP++F+ +   LD LG     E++ +  + K   LQ+E
Sbjct: 136 ILKSMSVNIDDKEMAMAVLNGLPARFEALIVALDALG---NEEKIFSLDFVKSRLLQEE 191


>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1499

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
 Frame = +2

Query: 2   QNYHSWKVKMSNILKGNNLLDII-----------TFPPPGNPNDNWIKKNNFAAMSISLS 148
           ++Y  WK+KM  ILK   L D+I           T P      D+ + K+  A   +  +
Sbjct: 15  ESYGFWKIKMITILKTRKLWDVIENGVTSNSSPETSPALTRERDDQVMKDMMALQILQSA 74

Query: 149 LSDELTPHIDGQNSAYLMWQTLANIFDKKNSAK---LRSLKDKLDTLRLPEESTVTELIS 319
           +SD + P I   +SA   W  L   F   +  K   L++L+ + + L++ E  T+ +  +
Sbjct: 75  VSDSIFPRIAPASSATEAWNALEMEFQGSSQVKMINLQTLRREYENLKMEEGETINDFTT 134

Query: 320 AVLSLQKQILAQGENIKDEDMVYYTLKALPSKFDKMKETLD---DLGIHFTFEELCNKLY 490
            +++L  Q+   GE   D  +V   L ++P +FD +   L+   DL    +  EL   L 
Sbjct: 135 KLINLSNQLRVHGEEKSDYQVVQKILISVPQQFDSIVGVLEQTKDLST-LSVTELIGTLK 193

Query: 491 TKEARL 508
             E RL
Sbjct: 194 AHERRL 199


>gb|ACY01936.1| hypothetical protein [Beta vulgaris]
          Length = 252

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 15/186 (8%)
 Frame = +2

Query: 2   QNYHSWKVKMSNILKGNNLLDIITF------PPPGNPNDNW---IKKNNFAAMSISLSLS 154
           + YH W VKM  + K   L DI+          P  PN       KK+  A   I  ++ 
Sbjct: 20  EKYHLWSVKMQTLFKSQELWDIVECGYEEPNESPAEPNQKLRENRKKDAKALCFIQSAVD 79

Query: 155 DELTPHIDGQNSAYLMWQTLANIF--DKK-NSAKLRSLKDKLDTLRLPEESTVTELISAV 325
           D++ P I    ++   W+ + + +  DKK  S KL+ L+ + ++L++ ++  +   +S V
Sbjct: 80  DDIFPRISTAKTSKDAWEIIKHEYRGDKKVISVKLQFLRSEFESLQMKDKEPIQGYLSKV 139

Query: 326 LSLQKQILAQGENIKDEDMVYYTLKALPSKFDKMKETLD---DLGIHFTFEELCNKLYTK 496
            ++  Q+ + GE I  + +V   L++L   FD +   ++   DL   +TF+EL   L + 
Sbjct: 140 SAIINQMKSYGEEISSQAIVSKVLRSLNPSFDNVVAAIEESKDLST-YTFDELMCSLLSH 198

Query: 497 EARLQQ 514
           E R+++
Sbjct: 199 EVRIKK 204


>ref|XP_005717319.1| RNA-dependent DNA polymerase [Chondrus crispus]
           gi|515797405|emb|CDF77535.1| RNA-dependent DNA
           polymerase [Chondrus crispus]
          Length = 1372

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 8/179 (4%)
 Frame = +2

Query: 5   NYHSWKVKMSNILKGNNLLDIITFPPPGN-PNDN-------WIKKNNFAAMSISLSLSDE 160
           N++ WK K+  +L    L D+  +   G  P++        WI+ ++ A   I LSLSDE
Sbjct: 19  NFYVWKQKIQLLLA---LRDVDEYIVEGRVPSEERAEERKKWIRGDSKAKALIGLSLSDE 75

Query: 161 LTPHIDGQNSAYLMWQTLANIFDKKNSAKLRSLKDKLDTLRLPEESTVTELISAVLSLQK 340
              H+   ++A+ MW+ + N+F++       + + +  T+++     V   I+ V  L  
Sbjct: 76  HLEHVRDVDTAHEMWEAIVNVFERHTLLNKLAARREFYTVKMLSGEKVLAYINRVKQLAA 135

Query: 341 QILAQGENIKDEDMVYYTLKALPSKFDKMKETLDDLGIHFTFEELCNKLYTKEARLQQE 517
            + +   NI D++M    L  LP++F+ +   LD LG     E++ +  + K   LQ+E
Sbjct: 136 ILKSMSVNIDDKEMAMAVLNGLPARFEALIVALDALG---NEEKIFSLDFVKSRLLQEE 191


>emb|CBI25270.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 12/183 (6%)
 Frame = +2

Query: 5   NYHSWKVKMSNILKGNNLLDII--TFPPPG---------NPNDN-WIKKNNFAAMSISLS 148
           NY  W+ +M NI+  N L ++I    P P          NP  + W  +N      I  S
Sbjct: 37  NYLLWRTQMLNIIIANGLEEMIHGKIPAPSRFLGDSENINPEYSIWQCQNRLVMCWIYSS 96

Query: 149 LSDELTPHIDGQNSAYLMWQTLANIFDKKNSAKLRSLKDKLDTLRLPEESTVTELISAVL 328
           L+  +   I G ++A  +W  L  IF   + A++  L  +L T +    S +  L+  + 
Sbjct: 97  LTKGVMAQIIGLDTASEIWTALEKIFSAASKARIMQLHFQLQTTKKGGLSMMEYLLK-IK 155

Query: 329 SLQKQILAQGENIKDEDMVYYTLKALPSKFDKMKETLDDLGIHFTFEELCNKLYTKEARL 508
           S+   +LA GENI ++D + Y L  L +K++    T+       + EE+ + L T E RL
Sbjct: 156 SIVDNLLAIGENITEQDRILYLLAGLGAKYNSFVITVTSGHEPLSLEEIHSMLLTHENRL 215

Query: 509 QQE 517
           +Q+
Sbjct: 216 EQQ 218


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
 Frame = +2

Query: 8   YHSWKVKMSNILKGNNLLDIIT--FPPPGNP---NDNWIKKNNFAAMSISLSLSDELTPH 172
           Y  W +KM  + K  +L D++   +P P       +N  KK++ A   I  ++ + +   
Sbjct: 24  YEFWSIKMKTLFKSQDLWDLVENGYPYPDEEARLKEN-TKKDSKALFFIQQAVHESIFSK 82

Query: 173 IDGQNSAYLMWQTLANIFD---KKNSAKLRSLKDKLDTLRLPEESTVTELISAVLSLQKQ 343
           I    +    W TL   F    K  + KL+SL+   +TL +    +V + +S V ++  Q
Sbjct: 83  IAVATTTKEAWTTLKTAFQGSSKVITVKLQSLRRDFETLHMKNGESVQDFLSRVAAIVNQ 142

Query: 344 ILAQGENIKDEDMVYYTLKALPSKFDKMKETLDD-LGIH-FTFEELCNKLYTKEARLQQ 514
           + + GE+I D+ +V   L++L  KFD +   +++  G+  ++F+EL   L + E RL +
Sbjct: 143 MRSYGEDILDQTIVAKVLRSLTPKFDHVVAAIEESKGLSTYSFDELMGSLQSHEVRLSR 201


>ref|XP_005714350.1| unnamed protein product [Chondrus crispus]
           gi|507110784|emb|CDF34531.1| unnamed protein product
           [Chondrus crispus]
          Length = 618

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
 Frame = +2

Query: 5   NYHSWKVKMSNILKGNNLLDIITFPPPGNPNDN----WIKKNNFAAMSISLSLSDELTPH 172
           N+H WK K+  +L   ++   +    P N   +    WI+ +  A   I L+LSD+   H
Sbjct: 18  NFHIWKQKIQLLLALRDVDQYVFDDIPENATSDDRRKWIRGDAKAKAVIGLTLSDDYLQH 77

Query: 173 IDGQNSAYLMWQTLANIFDKKNSA-KLRSLKDKLDTLRLPEESTVTELISAVLSLQKQIL 349
           + G +SA   W+ + N+F++     KL + +D      LP E  V   I+ V  L  ++ 
Sbjct: 78  VRGCSSAKETWEAILNVFERHTLLNKLAARRDFYTVSMLPSEK-VLVFINRVKQLAARLQ 136

Query: 350 AQGENIKDEDMVYYTLKALPSKFDKMKETLDDLGIH---FTFEELCNKLYTKEAR 505
           +    I D+++    L  LP +FD +   LD LG     F  E + ++L  +E R
Sbjct: 137 SMSVEIDDKEIAMAVLNGLPPRFDNLIVALDALGNEDKVFGLEFVKSRLLQEEQR 191


>gb|EMJ27942.1| hypothetical protein PRUPE_ppa019101mg, partial [Prunus persica]
          Length = 236

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
 Frame = +2

Query: 5   NYHSWKVKMSNILKGNNLLDII----TFPP--PGNPNDNWIKKNNFAAMSISLSLSDELT 166
           NY SW+ + + +L G +L+  +    T PP  P  P   WI+++      I  S+S ++ 
Sbjct: 41  NYPSWRAQFNALLIGYDLMGYVDGSSTCPPDTPVAPRALWIRQDQLLLHVILASVSPQVI 100

Query: 167 PHIDGQNSAYLMWQTLANIFDKKNSAKLRSLKDKLDTLRLPEESTVTELISAVLSLQKQI 346
             I    ++   W  L ++F  K  A++  LK++L TL   E+  V++ +  V  +  ++
Sbjct: 101 SLIASAKTSKEAWDKLLHLFASKARARVLGLKERL-TLMRREDKPVSQYLQDVKVIADEL 159

Query: 347 LAQGENIKDEDMVYYTLKALPSKFDKMKETLDDLGIHFTFEELCNKLYTKEARL 508
                 + D+D++ Y L  + S+F ++   +       +FE L +KL   EA L
Sbjct: 160 AIIDVPLSDDDLLLYILNGVGSEFKEIAAVVRSCDTSISFENLHDKLVEHEAAL 213