BLASTX nr result

ID: Ephedra27_contig00030687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00030687
         (546 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76644.1| unknown [Picea sitchensis]                             115   4e-25
ref|XP_002972110.1| hypothetical protein SELMODRAFT_412612 [Sela...   112   4e-24
ref|XP_002993563.1| hypothetical protein SELMODRAFT_137237 [Sela...   112   4e-24
ref|XP_004296072.1| PREDICTED: DNA repair and recombination prot...   105   3e-22
ref|XP_006423032.1| hypothetical protein CICLE_v10027772mg [Citr...   105   4e-22
ref|XP_001778343.1| predicted protein [Physcomitrella patens] gi...   107   4e-22
ref|XP_006829734.1| hypothetical protein AMTR_s00126p00116180 [A...   105   5e-22
ref|XP_006487098.1| PREDICTED: DNA repair and recombination prot...   105   5e-22
emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]   104   8e-22
ref|XP_004237378.1| PREDICTED: DNA repair and recombination prot...   103   1e-21
ref|XP_006350409.1| PREDICTED: DNA repair and recombination prot...   103   1e-21
gb|EOX98236.1| RAD54 isoform 2 [Theobroma cacao]                      103   1e-21
gb|EOX98238.1| RAD54 isoform 4, partial [Theobroma cacao]             103   1e-21
gb|EOX98235.1| DNA repair and recombination protein RAD54-like i...   103   1e-21
gb|EOX98237.1| RAD54 isoform 3 [Theobroma cacao]                      103   1e-21
gb|EOX98239.1| RAD54 isoform 5 [Theobroma cacao]                      103   1e-21
sp|A4PBL4.1|RAD54_ORYSJ RecName: Full=DNA repair and recombinati...   103   2e-21
gb|EEE57852.1| hypothetical protein OsJ_08484 [Oryza sativa Japo...   103   2e-21
gb|EEC74047.1| hypothetical protein OsI_09041 [Oryza sativa Indi...   103   2e-21
emb|CBI32424.3| unnamed protein product [Vitis vinifera]              102   3e-21

>gb|ADE76644.1| unknown [Picea sitchensis]
          Length = 407

 Score =  115 bits (288), Expect(2) = 4e-25
 Identities = 54/60 (90%), Positives = 58/60 (96%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLFAQ+CR+RNYPFLRLDGT+SI KRRK VQ+FNDPSQNEFAFLLSSKAGGCGLNLI
Sbjct: 27  QTLDLFAQICRERNYPFLRLDGTTSIGKRRKLVQRFNDPSQNEFAFLLSSKAGGCGLNLI 86



 Score = 25.0 bits (53), Expect(2) = 4e-25
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 225 VKFDPDWNTAN 193
           V FDPDWN AN
Sbjct: 92  VLFDPDWNPAN 102


>ref|XP_002972110.1| hypothetical protein SELMODRAFT_412612 [Selaginella moellendorffii]
           gi|300160409|gb|EFJ27027.1| hypothetical protein
           SELMODRAFT_412612 [Selaginella moellendorffii]
          Length = 1011

 Score =  112 bits (279), Expect(2) = 4e-24
 Identities = 52/60 (86%), Positives = 58/60 (96%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLFAQLCR+RNYP++RLDG++SI KR+K VQKFNDPSQNEFAFLLSSKAGGCGLNLI
Sbjct: 491 QTLDLFAQLCRERNYPYVRLDGSTSIGKRQKLVQKFNDPSQNEFAFLLSSKAGGCGLNLI 550



 Score = 25.0 bits (53), Expect(2) = 4e-24
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 225 VKFDPDWNTAN 193
           V FDPDWN AN
Sbjct: 556 VLFDPDWNPAN 566


>ref|XP_002993563.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii]
           gi|300138630|gb|EFJ05392.1| hypothetical protein
           SELMODRAFT_137237 [Selaginella moellendorffii]
          Length = 852

 Score =  112 bits (279), Expect(2) = 4e-24
 Identities = 52/60 (86%), Positives = 58/60 (96%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLFAQLCR+RNYP++RLDG++SI KR+K VQKFNDPSQNEFAFLLSSKAGGCGLNLI
Sbjct: 535 QTLDLFAQLCRERNYPYVRLDGSTSIGKRQKLVQKFNDPSQNEFAFLLSSKAGGCGLNLI 594



 Score = 25.0 bits (53), Expect(2) = 4e-24
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 225 VKFDPDWNTAN 193
           V FDPDWN AN
Sbjct: 600 VLFDPDWNPAN 610


>ref|XP_004296072.1| PREDICTED: DNA repair and recombination protein RAD54-like
           [Fragaria vesca subsp. vesca]
          Length = 926

 Score =  105 bits (263), Expect(2) = 3e-22
 Identities = 49/60 (81%), Positives = 57/60 (95%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLFAQLCR+R YP+LRLDGT+SI+KR+K V +FNDPS++EFAFLLSSKAGGCGLNLI
Sbjct: 559 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNQFNDPSKDEFAFLLSSKAGGCGLNLI 618



 Score = 25.0 bits (53), Expect(2) = 3e-22
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 225 VKFDPDWNTAN 193
           V FDPDWN AN
Sbjct: 624 VLFDPDWNPAN 634


>ref|XP_006423032.1| hypothetical protein CICLE_v10027772mg [Citrus clementina]
           gi|557524966|gb|ESR36272.1| hypothetical protein
           CICLE_v10027772mg [Citrus clementina]
          Length = 930

 Score =  105 bits (262), Expect(2) = 4e-22
 Identities = 49/60 (81%), Positives = 55/60 (91%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLFAQLCR+R YP+LRLDGT+SI+KR+K V  FNDPS+NEF FLLSSKAGGCGLNLI
Sbjct: 566 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKNEFVFLLSSKAGGCGLNLI 625



 Score = 25.0 bits (53), Expect(2) = 4e-22
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 225 VKFDPDWNTAN 193
           V FDPDWN AN
Sbjct: 631 VLFDPDWNPAN 641


>ref|XP_001778343.1| predicted protein [Physcomitrella patens]
           gi|162670320|gb|EDQ56891.1| predicted protein
           [Physcomitrella patens]
          Length = 921

 Score =  107 bits (268), Expect(2) = 4e-22
 Identities = 49/59 (83%), Positives = 56/59 (94%)
 Frame = -2

Query: 389 TLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           TLDLFAQ+CR+RNYPF+RLDGT+SI KR+K V +FNDP+QNEFAFLLSSKAGGCGLNLI
Sbjct: 541 TLDLFAQICRERNYPFVRLDGTTSIGKRQKLVSRFNDPNQNEFAFLLSSKAGGCGLNLI 599



 Score = 22.7 bits (47), Expect(2) = 4e-22
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 225 VKFDPDWNTA 196
           V FDPDWN A
Sbjct: 605 VLFDPDWNPA 614


>ref|XP_006829734.1| hypothetical protein AMTR_s00126p00116180 [Amborella trichopoda]
           gi|548835253|gb|ERM97150.1| hypothetical protein
           AMTR_s00126p00116180 [Amborella trichopoda]
          Length = 988

 Score =  105 bits (261), Expect(2) = 5e-22
 Identities = 49/60 (81%), Positives = 55/60 (91%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLFAQLCR+R YPFLRLDGT+S++KR+K V KFND SQ+EF FLLSSKAGGCGLNLI
Sbjct: 617 QTLDLFAQLCRERKYPFLRLDGTTSVSKRQKLVNKFNDSSQDEFVFLLSSKAGGCGLNLI 676



 Score = 25.0 bits (53), Expect(2) = 5e-22
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 225 VKFDPDWNTAN 193
           V FDPDWN AN
Sbjct: 682 VLFDPDWNPAN 692


>ref|XP_006487098.1| PREDICTED: DNA repair and recombination protein RAD54-like [Citrus
           sinensis]
          Length = 930

 Score =  105 bits (261), Expect(2) = 5e-22
 Identities = 49/60 (81%), Positives = 56/60 (93%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLFAQLCR+R YP+LRLDGT+SI+KR+K V  FNDPS++EFAFLLSSKAGGCGLNLI
Sbjct: 566 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNHFNDPSKDEFAFLLSSKAGGCGLNLI 625



 Score = 25.0 bits (53), Expect(2) = 5e-22
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 225 VKFDPDWNTAN 193
           V FDPDWN AN
Sbjct: 631 VLFDPDWNPAN 641


>emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
          Length = 985

 Score =  104 bits (259), Expect(2) = 8e-22
 Identities = 48/60 (80%), Positives = 55/60 (91%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLFAQLCR+R YP+LRLDGT+SINKR+K V +FNDP ++EF FLLSSKAGGCGLNLI
Sbjct: 571 QTLDLFAQLCRERRYPYLRLDGTTSINKRQKLVNRFNDPLKDEFVFLLSSKAGGCGLNLI 630



 Score = 25.0 bits (53), Expect(2) = 8e-22
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 225 VKFDPDWNTAN 193
           V FDPDWN AN
Sbjct: 636 VLFDPDWNPAN 646


>ref|XP_004237378.1| PREDICTED: DNA repair and recombination protein RAD54-like [Solanum
           lycopersicum]
          Length = 956

 Score =  103 bits (258), Expect(2) = 1e-21
 Identities = 48/60 (80%), Positives = 56/60 (93%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLF+QLCR+R YPFLRLDGT+SI+KR+K V  FNDP+++EFAFLLSSKAGGCGLNLI
Sbjct: 568 QTLDLFSQLCRERRYPFLRLDGTTSISKRQKLVNHFNDPAKDEFAFLLSSKAGGCGLNLI 627



 Score = 25.0 bits (53), Expect(2) = 1e-21
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 225 VKFDPDWNTAN 193
           V FDPDWN AN
Sbjct: 633 VLFDPDWNPAN 643


>ref|XP_006350409.1| PREDICTED: DNA repair and recombination protein RAD54-like [Solanum
           tuberosum]
          Length = 952

 Score =  103 bits (258), Expect(2) = 1e-21
 Identities = 48/60 (80%), Positives = 56/60 (93%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLF+QLCR+R YPFLRLDGT+SI+KR+K V  FNDP+++EFAFLLSSKAGGCGLNLI
Sbjct: 566 QTLDLFSQLCRERRYPFLRLDGTTSISKRQKLVNHFNDPAKDEFAFLLSSKAGGCGLNLI 625



 Score = 25.0 bits (53), Expect(2) = 1e-21
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 225 VKFDPDWNTAN 193
           V FDPDWN AN
Sbjct: 631 VLFDPDWNPAN 641


>gb|EOX98236.1| RAD54 isoform 2 [Theobroma cacao]
          Length = 676

 Score =  103 bits (257), Expect(2) = 1e-21
 Identities = 47/60 (78%), Positives = 56/60 (93%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLFAQLCR+R YP+LRLDGT+SI+KR+K V +FNDP+++EF FLLSSKAGGCGLNLI
Sbjct: 580 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNRFNDPTKDEFVFLLSSKAGGCGLNLI 639



 Score = 25.4 bits (54), Expect(2) = 1e-21
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 225 VKFDPDWNTANSMI 184
           V FDPDWN AN  +
Sbjct: 645 VLFDPDWNPANDKL 658


>gb|EOX98238.1| RAD54 isoform 4, partial [Theobroma cacao]
          Length = 661

 Score =  103 bits (257), Expect(2) = 1e-21
 Identities = 47/60 (78%), Positives = 56/60 (93%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLFAQLCR+R YP+LRLDGT+SI+KR+K V +FNDP+++EF FLLSSKAGGCGLNLI
Sbjct: 565 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNRFNDPTKDEFVFLLSSKAGGCGLNLI 624



 Score = 25.4 bits (54), Expect(2) = 1e-21
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 225 VKFDPDWNTANSMI 184
           V FDPDWN AN  +
Sbjct: 630 VLFDPDWNPANDKL 643


>gb|EOX98235.1| DNA repair and recombination protein RAD54-like isoform 1
           [Theobroma cacao]
          Length = 968

 Score =  103 bits (257), Expect(2) = 1e-21
 Identities = 47/60 (78%), Positives = 56/60 (93%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLFAQLCR+R YP+LRLDGT+SI+KR+K V +FNDP+++EF FLLSSKAGGCGLNLI
Sbjct: 580 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNRFNDPTKDEFVFLLSSKAGGCGLNLI 639



 Score = 25.0 bits (53), Expect(2) = 1e-21
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 225 VKFDPDWNTAN 193
           V FDPDWN AN
Sbjct: 645 VLFDPDWNPAN 655


>gb|EOX98237.1| RAD54 isoform 3 [Theobroma cacao]
          Length = 801

 Score =  103 bits (257), Expect(2) = 1e-21
 Identities = 47/60 (78%), Positives = 56/60 (93%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLFAQLCR+R YP+LRLDGT+SI+KR+K V +FNDP+++EF FLLSSKAGGCGLNLI
Sbjct: 580 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNRFNDPTKDEFVFLLSSKAGGCGLNLI 639



 Score = 25.0 bits (53), Expect(2) = 1e-21
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 225 VKFDPDWNTAN 193
           V FDPDWN AN
Sbjct: 645 VLFDPDWNPAN 655


>gb|EOX98239.1| RAD54 isoform 5 [Theobroma cacao]
          Length = 668

 Score =  103 bits (257), Expect(2) = 1e-21
 Identities = 47/60 (78%), Positives = 56/60 (93%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLFAQLCR+R YP+LRLDGT+SI+KR+K V +FNDP+++EF FLLSSKAGGCGLNLI
Sbjct: 580 QTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNRFNDPTKDEFVFLLSSKAGGCGLNLI 639



 Score = 25.0 bits (53), Expect(2) = 1e-21
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 225 VKFDPDWNTAN 193
           V FDPDWN AN
Sbjct: 645 VLFDPDWNPAN 655


>sp|A4PBL4.1|RAD54_ORYSJ RecName: Full=DNA repair and recombination protein RAD54;
           Short=OsRad54 gi|144369229|dbj|BAF56217.1| OsRad54
           [Oryza sativa Japonica Group]
          Length = 980

 Score =  103 bits (256), Expect(2) = 2e-21
 Identities = 46/60 (76%), Positives = 55/60 (91%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLFAQLCR+R YP++RLDG +SINKR+K V +FNDPS++EF FLLSSKAGGCGLNL+
Sbjct: 617 QTLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNLV 676



 Score = 24.6 bits (52), Expect(2) = 2e-21
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 225 VKFDPDWNTAN 193
           + FDPDWN AN
Sbjct: 682 ILFDPDWNPAN 692


>gb|EEE57852.1| hypothetical protein OsJ_08484 [Oryza sativa Japonica Group]
          Length = 952

 Score =  103 bits (256), Expect(2) = 2e-21
 Identities = 46/60 (76%), Positives = 55/60 (91%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLFAQLCR+R YP++RLDG +SINKR+K V +FNDPS++EF FLLSSKAGGCGLNL+
Sbjct: 617 QTLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNLV 676



 Score = 24.6 bits (52), Expect(2) = 2e-21
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 225 VKFDPDWNTAN 193
           + FDPDWN AN
Sbjct: 682 ILFDPDWNPAN 692


>gb|EEC74047.1| hypothetical protein OsI_09041 [Oryza sativa Indica Group]
          Length = 952

 Score =  103 bits (256), Expect(2) = 2e-21
 Identities = 46/60 (76%), Positives = 55/60 (91%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLFAQLCR+R YP++RLDG +SINKR+K V +FNDPS++EF FLLSSKAGGCGLNL+
Sbjct: 617 QTLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNLV 676



 Score = 24.6 bits (52), Expect(2) = 2e-21
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 225 VKFDPDWNTAN 193
           + FDPDWN AN
Sbjct: 682 ILFDPDWNPAN 692


>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  102 bits (254), Expect(2) = 3e-21
 Identities = 47/60 (78%), Positives = 55/60 (91%)
 Frame = -2

Query: 392 QTLDLFAQLCRKRNYPFLRLDGTSSINKRRKFVQKFNDPSQNEFAFLLSSKAGGCGLNLI 213
           QTLDLFAQLCR+R YP+LRLDGT+SINKR+K V +F+DP ++EF FLLSSKAGGCGLNLI
Sbjct: 742 QTLDLFAQLCRERRYPYLRLDGTTSINKRQKLVNRFSDPLKDEFVFLLSSKAGGCGLNLI 801



 Score = 25.0 bits (53), Expect(2) = 3e-21
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 225 VKFDPDWNTAN 193
           V FDPDWN AN
Sbjct: 807 VLFDPDWNPAN 817


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