BLASTX nr result

ID: Ephedra27_contig00030664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00030664
         (408 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006829844.1| hypothetical protein AMTR_s00119p00113390 [A...    45   1e-05

>ref|XP_006829844.1| hypothetical protein AMTR_s00119p00113390 [Amborella trichopoda]
           gi|548835425|gb|ERM97260.1| hypothetical protein
           AMTR_s00119p00113390 [Amborella trichopoda]
          Length = 894

 Score = 45.1 bits (105), Expect(2) = 1e-05
 Identities = 20/39 (51%), Positives = 27/39 (69%)
 Frame = +1

Query: 43  TNSSDA*TLVHVMSFERRERGWNNLTIIPENECKIQFKE 159
           T   DA T+V V + ERRERGW ++ ++P +ECK  FKE
Sbjct: 48  TGPRDAHTMVRVKNVERRERGWYDVIVLPLHECKWTFKE 86



 Score = 29.6 bits (65), Expect(2) = 1e-05
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +3

Query: 153 QRGDMVVLSMSK*GEGRLK--KFVSGNGSDETKGKNSSRLGGRVWKY*P 293
           + GD+ VLS SK    RL+  K  SG   DE + + + R+ G V ++ P
Sbjct: 85  KEGDVAVLSSSKPETVRLRRTKVNSGTNEDEVESEAAGRVAGTVRRFSP 133


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