BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00030611
         (645 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela...   277   2e-72
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela...   277   2e-72
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi...   253   3e-65
ref|XP_002951663.1| hypothetical protein VOLCADRAFT_81566 [Volvo...   251   2e-64
ref|XP_003057499.1| predicted protein [Micromonas pusilla CCMP15...   250   3e-64
ref|XP_002502032.1| predicted protein [Micromonas sp. RCC299] gi...   249   6e-64
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   245   7e-63
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              244   2e-62
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   244   2e-62
ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s...   242   6e-62
ref|XP_003075225.1| RNA polymerase I, large subunit (ISS) [Ostre...   241   1e-61
gb|EGO27147.1| hypothetical protein SERLADRAFT_446372 [Serpula l...   240   3e-61
gb|EGO01485.1| hypothetical protein SERLA73DRAFT_103293 [Serpula...   240   3e-61
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...   238   9e-61
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   238   9e-61
gb|EMJ09344.1| hypothetical protein PRUPE_ppa024521mg, partial [...   238   9e-61
ref|XP_001416093.1| predicted protein [Ostreococcus lucimarinus ...   238   9e-61
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A...   237   2e-60
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu...   237   2e-60
gb|EIN10167.1| beta and beta-prime subunits of DNA dependent RNA...   237   3e-60

>ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
           gi|300158014|gb|EFJ24638.1| hypothetical protein
           SELMODRAFT_442419 [Selaginella moellendorffii]
          Length = 1348

 Score =  277 bits (709), Expect = 2e-72
 Identities = 137/210 (65%), Positives = 168/210 (80%), Gaps = 2/210 (0%)
 Frame = -1

Query: 645 VQDDLTPLKVFNLFSKMIDEDCELLYLHGRPEKLIVTHMTVPPVAIRPSTMTDG--GSNE 472
           +Q+DLTPLKV  LF K+I EDC +L L  RPE+LIV HM VPPVAIRPS   D   GSNE
Sbjct: 230 IQEDLTPLKVLGLFEKIIGEDCVVLDLVDRPEQLIVQHMPVPPVAIRPSVEMDAAVGSNE 289

Query: 471 ADITMMLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQG 292
            D+T+ L+ I++ N  +   +E+G S+ +CME WD LQ+Q+ +YINSE+PGL P+M + G
Sbjct: 290 DDVTIKLMHIIEQNNQIRACLESGLSIAKCMEIWDFLQIQVAMYINSELPGLPPNMQT-G 348

Query: 291 KKMDGFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPEK 112
           K + GFVQRLKGK+GRFRGNLSGKRVDFTGRTVISPDPNLKV+EVA+P+LMA  LTYPEK
Sbjct: 349 KPLRGFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVSEVAVPILMAQTLTYPEK 408

Query: 111 VSKHNIEKLRQRVSNGSQKYPGANYIICHD 22
           VS HNIEKLRQRV NG +K+PGAN+++  D
Sbjct: 409 VSAHNIEKLRQRVINGKEKHPGANFVVFPD 438


>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
           gi|300146624|gb|EFJ13293.1| hypothetical protein
           SELMODRAFT_446351 [Selaginella moellendorffii]
          Length = 1393

 Score =  277 bits (709), Expect = 2e-72
 Identities = 137/210 (65%), Positives = 168/210 (80%), Gaps = 2/210 (0%)
 Frame = -1

Query: 645 VQDDLTPLKVFNLFSKMIDEDCELLYLHGRPEKLIVTHMTVPPVAIRPSTMTDG--GSNE 472
           +Q+DLTPLKV  LF K+I EDC +L L  RPE+LIV HM VPPVAIRPS   D   GSNE
Sbjct: 230 IQEDLTPLKVLGLFEKIIGEDCVVLDLVDRPEQLIVQHMPVPPVAIRPSVEMDAAVGSNE 289

Query: 471 ADITMMLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQG 292
            D+T+ L+ I++ N  +   +E+G S+ +CME WD LQ+Q+ +YINSE+PGL P+M + G
Sbjct: 290 DDVTIKLMHIIEQNNQIRACLESGLSIAKCMEIWDFLQIQVAMYINSELPGLPPNMQT-G 348

Query: 291 KKMDGFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPEK 112
           K + GFVQRLKGK+GRFRGNLSGKRVDFTGRTVISPDPNLKV+EVA+P+LMA  LTYPEK
Sbjct: 349 KPLRGFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVSEVAVPILMAQTLTYPEK 408

Query: 111 VSKHNIEKLRQRVSNGSQKYPGANYIICHD 22
           VS HNIEKLRQRV NG +K+PGAN+++  D
Sbjct: 409 VSAHNIEKLRQRVINGKEKHPGANFVVFPD 438


>ref|XP_001757221.1| predicted protein [Physcomitrella patens]
           gi|162691719|gb|EDQ78080.1| predicted protein
           [Physcomitrella patens]
          Length = 1397

 Score =  253 bits (646), Expect = 3e-65
 Identities = 129/217 (59%), Positives = 162/217 (74%), Gaps = 2/217 (0%)
 Frame = -1

Query: 645 VQDDLTPLKVFNLFSKMIDEDCELLYLHGRPEKLIVTHMTVPPVAIRPSTMTDG--GSNE 472
           V D+L P++V  LF  MI++DCE+L L  RPEKLIVTH+ VPPVAIRPS   +   GSNE
Sbjct: 224 VYDNLDPMRVLQLFESMIEQDCEVLDLAERPEKLIVTHLIVPPVAIRPSVEMESAAGSNE 283

Query: 471 ADITMMLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQG 292
            DIT+ LL I+  N +L   +E G +  + ME W+LLQ Q+   INSE P       + G
Sbjct: 284 DDITVRLLGILNCNNSLRTCVEQGLAAEKTMETWELLQSQVSQLINSETPVPRSEQPTSG 343

Query: 291 KKMDGFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPEK 112
           K+  GFVQRLKGK+GRFRGNLSGKRVDFTGRTVISPDPNLK+TEVA+P+LMA +LTYPEK
Sbjct: 344 KQPRGFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKITEVAVPLLMAQLLTYPEK 403

Query: 111 VSKHNIEKLRQRVSNGSQKYPGANYIICHDDSRLSIR 1
           VS++NI+KLR R+ NG  K+PGAN+II  D ++L ++
Sbjct: 404 VSRYNIDKLRGRIINGMTKHPGANFIIFPDGNKLYLK 440


>ref|XP_002951663.1| hypothetical protein VOLCADRAFT_81566 [Volvox carteri f.
           nagariensis] gi|300262911|gb|EFJ47114.1| hypothetical
           protein VOLCADRAFT_81566 [Volvox carteri f. nagariensis]
          Length = 1365

 Score =  251 bits (640), Expect = 2e-64
 Identities = 120/209 (57%), Positives = 153/209 (73%)
 Frame = -1

Query: 639 DDLTPLKVFNLFSKMIDEDCELLYLHGRPEKLIVTHMTVPPVAIRPSTMTDGGSNEADIT 460
           DDL PL+V  LF  + DED +LL + GRPE L+ TH+ VPPVAIRPS   DG SNE DIT
Sbjct: 161 DDLHPLRVRALFENIPDEDLDLLDIQGRPEDLVTTHLAVPPVAIRPSVEMDGSSNEDDIT 220

Query: 459 MMLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQGKKMD 280
           M L++I+  N  L   +E G  +   ME WD LQ+Q  + INS++PGL   M   G+ + 
Sbjct: 221 MKLMQIIDVNNVLRQGLEKGLPINNLMENWDFLQVQCAMLINSDLPGLPAQMQMPGRPLR 280

Query: 279 GFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPEKVSKH 100
           GFVQRLKGK+GRFRGNLSGKRVDF+GRTVISPDPNL++ +V +P  MA+VLTYPE+V++H
Sbjct: 281 GFVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLQIFQVCVPQHMAVVLTYPERVTRH 340

Query: 99  NIEKLRQRVSNGSQKYPGANYIICHDDSR 13
           NI+KLRQRV NG   +PGAN+++  D  +
Sbjct: 341 NIDKLRQRVLNGISTWPGANFVVTPDGDK 369


>ref|XP_003057499.1| predicted protein [Micromonas pusilla CCMP1545]
           gi|226461851|gb|EEH59144.1| predicted protein
           [Micromonas pusilla CCMP1545]
          Length = 1591

 Score =  250 bits (638), Expect = 3e-64
 Identities = 119/206 (57%), Positives = 154/206 (74%), Gaps = 2/206 (0%)
 Frame = -1

Query: 645 VQDDLTPLKVFNLFSKMIDEDCELLYLHGRPEKLIVTHMTVPPVAIRPSTMTDG--GSNE 472
           VQDDL P++V ++F ++   DCELL +  RPE LI+TH+ VPPV IRPS   DG  GSNE
Sbjct: 232 VQDDLNPIRVISIFRRISPMDCELLDIADRPEHLILTHLPVPPVCIRPSVEMDGVAGSNE 291

Query: 471 ADITMMLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQG 292
            DITM L++I++ N  L   +E G ++   ME WD LQ+Q+ +Y NSE+PGL       G
Sbjct: 292 DDITMKLIQIIEVNNVLRQGLEKGLAIANLMENWDFLQVQIAMYFNSELPGLSLQYQGPG 351

Query: 291 KKMDGFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPEK 112
           K + GFVQRLKGK+GRFRGNLSGKRVDF+GRTVISPDPNL++ EV +PM +A ++TYPE 
Sbjct: 352 KPLRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVGVPMHIAKLMTYPEV 411

Query: 111 VSKHNIEKLRQRVSNGSQKYPGANYI 34
           +SKHNIE +R+RV NG  K+PGAN++
Sbjct: 412 ISKHNIEHIRERVRNGMNKHPGANFV 437


>ref|XP_002502032.1| predicted protein [Micromonas sp. RCC299]
           gi|226517297|gb|ACO63290.1| predicted protein
           [Micromonas sp. RCC299]
          Length = 1479

 Score =  249 bits (635), Expect = 6e-64
 Identities = 120/206 (58%), Positives = 154/206 (74%), Gaps = 2/206 (0%)
 Frame = -1

Query: 645 VQDDLTPLKVFNLFSKMIDEDCELLYLHGRPEKLIVTHMTVPPVAIRPSTMTDG--GSNE 472
           VQDDL P++V ++ SK+   DCELL +  RPE LI+TH+ VPPV IRPS   +G  GSNE
Sbjct: 232 VQDDLNPIRVESILSKISPMDCELLDVADRPEHLILTHLPVPPVCIRPSVEMEGQAGSNE 291

Query: 471 ADITMMLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQG 292
            DITM L++I++ N  L   +E G ++   ME WD LQ+Q  +YINSE+PGL       G
Sbjct: 292 DDITMKLIQIIEVNNVLRQGLEKGLAINNLMENWDFLQIQCAMYINSELPGLSAQYQGPG 351

Query: 291 KKMDGFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPEK 112
           K + GFVQRLKGK+GRFRGNLSGKRVDF+GRTVISPDPNL++ EV +PM +A ++TYPE 
Sbjct: 352 KPLRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVGVPMHIAKMMTYPEV 411

Query: 111 VSKHNIEKLRQRVSNGSQKYPGANYI 34
           VS+HNIE +R+RV NG  K+PGAN++
Sbjct: 412 VSRHNIEMIRERVRNGMNKHPGANFV 437


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Cucumis sativus]
          Length = 1400

 Score =  245 bits (626), Expect = 7e-63
 Identities = 123/213 (57%), Positives = 158/213 (74%), Gaps = 1/213 (0%)
 Frame = -1

Query: 639 DDLTPLKVFNLFSKMIDEDCELLYLHGRPEKLIVTHMTVPPVAIRPSTMTDGG-SNEADI 463
           D L P +V  LF +M DEDCELL+L  RPEKLI+T++ VPP+AIRPS + DG  SNE DI
Sbjct: 215 DILNPFRVLCLFQRMSDEDCELLFLSNRPEKLIITNVLVPPIAIRPSVIMDGSQSNENDI 274

Query: 462 TMMLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQGKKM 283
           T  L  I++ N ++S ++ T  S  +C+E+WD+LQ ++   INS++ G+ P      K +
Sbjct: 275 TERLKRIIQQNASVSQELSTSNSQAKCLESWDMLQSEVAQLINSDVRGI-PFSMQVSKPL 333

Query: 282 DGFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPEKVSK 103
            GFVQRLKGK+GRFRGNL GKRV+FTGRTVISPDPNLK+TEVA+P+ MA +LTYPE+V++
Sbjct: 334 AGFVQRLKGKQGRFRGNLCGKRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTR 393

Query: 102 HNIEKLRQRVSNGSQKYPGANYIICHDDSRLSI 4
           HNIEKLRQ VSNG  KYPGA  +   D S  S+
Sbjct: 394 HNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSL 426


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  244 bits (622), Expect = 2e-62
 Identities = 122/216 (56%), Positives = 160/216 (74%), Gaps = 2/216 (0%)
 Frame = -1

Query: 645 VQDDLTPLKVFNLFSKMIDEDCELLYLHGRPEKLIVTHMTVPPVAIRPSTMTDGG--SNE 472
           V D L P+KV +LF +M+DEDC+LL L  RPEKL++T++ VPP+AIRPS   DGG  SNE
Sbjct: 216 VVDILNPVKVLSLFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNE 275

Query: 471 ADITMMLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQG 292
            D+T  L  I++ N +L  +++   S ++C+  WD LQ+++  YINS++ G+ P      
Sbjct: 276 NDVTERLKRIIQANASLHQELQDTGSTSKCLAGWDYLQIEVAQYINSDVRGV-PLAMQAA 334

Query: 291 KKMDGFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPEK 112
           + + GFVQRLKGK+GRFRGNLSGKRV++TGRTVISPDPNLK+TEVAIP+LMA +L+YPE+
Sbjct: 335 RPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPER 394

Query: 111 VSKHNIEKLRQRVSNGSQKYPGANYIICHDDSRLSI 4
           VS HNIEKLRQ + NG  KYPGA  I   D S  S+
Sbjct: 395 VSHHNIEKLRQCILNGPFKYPGAKLIRYPDGSMRSL 430


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
           vinifera]
          Length = 1383

 Score =  244 bits (622), Expect = 2e-62
 Identities = 122/216 (56%), Positives = 160/216 (74%), Gaps = 2/216 (0%)
 Frame = -1

Query: 645 VQDDLTPLKVFNLFSKMIDEDCELLYLHGRPEKLIVTHMTVPPVAIRPSTMTDGG--SNE 472
           V D L P+KV +LF +M+DEDC+LL L  RPEKL++T++ VPP+AIRPS   DGG  SNE
Sbjct: 216 VVDILNPVKVLSLFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNE 275

Query: 471 ADITMMLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQG 292
            D+T  L  I++ N +L  +++   S ++C+  WD LQ+++  YINS++ G+ P      
Sbjct: 276 NDVTERLKRIIQANASLHQELQDTGSTSKCLAGWDYLQIEVAQYINSDVRGV-PLAMQAA 334

Query: 291 KKMDGFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPEK 112
           + + GFVQRLKGK+GRFRGNLSGKRV++TGRTVISPDPNLK+TEVAIP+LMA +L+YPE+
Sbjct: 335 RPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPER 394

Query: 111 VSKHNIEKLRQRVSNGSQKYPGANYIICHDDSRLSI 4
           VS HNIEKLRQ + NG  KYPGA  I   D S  S+
Sbjct: 395 VSHHNIEKLRQCILNGPFKYPGAKLIRYPDGSMRSL 430


>ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Fragaria vesca subsp. vesca]
          Length = 1390

 Score =  242 bits (618), Expect = 6e-62
 Identities = 120/212 (56%), Positives = 158/212 (74%), Gaps = 1/212 (0%)
 Frame = -1

Query: 633 LTPLKVFNLFSKMIDEDCELLYLHGRPEKLIVTHMTVPPVAIRPSTMTDGG-SNEADITM 457
           L P+KVF+LF +M+DEDCELL L  RPE LI+T + VPP+AIRPS + DG  SNE DIT 
Sbjct: 217 LNPVKVFSLFKRMLDEDCELLNLKSRPENLIMTTIAVPPIAIRPSVLVDGSQSNENDITE 276

Query: 456 MLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQGKKMDG 277
            L +I++TN  +  D+  G S TR +  W++LQ ++ LYINS++ G+   M++  K ++G
Sbjct: 277 RLKKIIQTNACVQQDLSEG-STTRFLSNWEILQAEVALYINSDVRGVPYHMTANAKPLNG 335

Query: 276 FVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPEKVSKHN 97
            VQRLKGK GRFRGNL GKRV++TGRTVISPDPNLK+TEV IP+ MA +L+YPE+VS HN
Sbjct: 336 LVQRLKGKTGRFRGNLCGKRVEYTGRTVISPDPNLKITEVGIPIQMAQILSYPERVSDHN 395

Query: 96  IEKLRQRVSNGSQKYPGANYIICHDDSRLSIR 1
           IEKLR+ V+NG  KYPGA  + C +    S++
Sbjct: 396 IEKLRRCVANGPFKYPGALVLKCQNGEEWSLK 427


>ref|XP_003075225.1| RNA polymerase I, large subunit (ISS) [Ostreococcus tauri]
           gi|116061779|emb|CAL52497.1| RNA polymerase I, large
           subunit (ISS) [Ostreococcus tauri]
          Length = 1406

 Score =  241 bits (615), Expect = 1e-61
 Identities = 115/206 (55%), Positives = 150/206 (72%), Gaps = 2/206 (0%)
 Frame = -1

Query: 645 VQDDLTPLKVFNLFSKMIDEDCELLYLHGRPEKLIVTHMTVPPVAIRPSTMTDG--GSNE 472
           VQDDL P++V ++  ++ D+DCELL +  RPE L++TH+ VPP  IRPS   DG  GSNE
Sbjct: 231 VQDDLNPIRVLSILQRITDQDCELLDIADRPEHLLLTHLPVPPCCIRPSVEMDGVSGSNE 290

Query: 471 ADITMMLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQG 292
            DITM L++I++ N  L   +E G ++   ME WD LQ+Q  +YINSE+PGL       G
Sbjct: 291 DDITMKLIQIIEVNNVLRQGLEKGLTINNLMENWDFLQIQCAMYINSELPGLSLQYQGPG 350

Query: 291 KKMDGFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPEK 112
           K + GFVQRLKGK+GRFRGNLSGKRVDF+ RTVISPDPNL + EV IP+ +A  +TYPE 
Sbjct: 351 KPLRGFVQRLKGKQGRFRGNLSGKRVDFSARTVISPDPNLGIDEVGIPIYIAKTMTYPEV 410

Query: 111 VSKHNIEKLRQRVSNGSQKYPGANYI 34
           V++HNI  LR+RV NG  ++PGAN++
Sbjct: 411 VNRHNIAMLRERVRNGMAEHPGANFV 436


>gb|EGO27147.1| hypothetical protein SERLADRAFT_446372 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 1403

 Score =  240 bits (612), Expect = 3e-61
 Identities = 123/207 (59%), Positives = 152/207 (73%), Gaps = 3/207 (1%)
 Frame = -1

Query: 645 VQDDLTPLKVFNLFSKMIDEDCELLYL---HGRPEKLIVTHMTVPPVAIRPSTMTDGGSN 475
           V +DL PLKV +LF ++ DEDCELL L   HGRPE+ I  +++VPPV IRPS   DG SN
Sbjct: 210 VHEDLNPLKVLDLFKRISDEDCELLGLRPAHGRPEEYIWQYISVPPVCIRPSVAQDGASN 269

Query: 474 EADITMMLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQ 295
           E D+T+ L EIV TN  +   +  G    + ME W+ LQL + +YINSE+PG+ PS   Q
Sbjct: 270 EDDLTVKLTEIVFTNALIKQGLSKGAPTAQFMEHWEFLQLSVAMYINSELPGV-PSQPGQ 328

Query: 294 GKKMDGFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPE 115
            K M GFVQRLKGK+GRFRGNLSGKRVDF+GRTVISPDPNL++ EVA+P  +A VLTYPE
Sbjct: 329 -KPMRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPERVAKVLTYPE 387

Query: 114 KVSKHNIEKLRQRVSNGSQKYPGANYI 34
           +V+ HNIE L+Q V NG   +PGANY+
Sbjct: 388 RVTPHNIEGLKQAVRNGCDVHPGANYV 414


>gb|EGO01485.1| hypothetical protein SERLA73DRAFT_103293 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 1400

 Score =  240 bits (612), Expect = 3e-61
 Identities = 123/207 (59%), Positives = 152/207 (73%), Gaps = 3/207 (1%)
 Frame = -1

Query: 645 VQDDLTPLKVFNLFSKMIDEDCELLYL---HGRPEKLIVTHMTVPPVAIRPSTMTDGGSN 475
           V +DL PLKV +LF ++ DEDCELL L   HGRPE+ I  +++VPPV IRPS   DG SN
Sbjct: 207 VHEDLNPLKVLDLFKRISDEDCELLGLRPAHGRPEEYIWQYISVPPVCIRPSVAQDGASN 266

Query: 474 EADITMMLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQ 295
           E D+T+ L EIV TN  +   +  G    + ME W+ LQL + +YINSE+PG+ PS   Q
Sbjct: 267 EDDLTVKLTEIVFTNALIKQGLSKGAPTAQFMEHWEFLQLSVAMYINSELPGV-PSQPGQ 325

Query: 294 GKKMDGFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPE 115
            K M GFVQRLKGK+GRFRGNLSGKRVDF+GRTVISPDPNL++ EVA+P  +A VLTYPE
Sbjct: 326 -KPMRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPERVAKVLTYPE 384

Query: 114 KVSKHNIEKLRQRVSNGSQKYPGANYI 34
           +V+ HNIE L+Q V NG   +PGANY+
Sbjct: 385 RVTPHNIEGLKQAVRNGCDVHPGANYV 411


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           isoform X2 [Solanum tuberosum]
          Length = 1243

 Score =  238 bits (608), Expect = 9e-61
 Identities = 124/216 (57%), Positives = 157/216 (72%), Gaps = 2/216 (0%)
 Frame = -1

Query: 645 VQDDLTPLKVFNLFSKMIDEDCELLYLHGRPEKLIVTHMTVPPVAIRPSTMTDGG--SNE 472
           V  +L P  V++LF  M DEDCELLYL  RPEKL+VT + VPP+AIRPS   DGG  SNE
Sbjct: 214 VPPELDPKVVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNE 273

Query: 471 ADITMMLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQG 292
            DIT  L  I++ N +L  ++    S  + +  W  LQ+++  YINS++ G+   M +Q 
Sbjct: 274 NDITERLKRIIQANASLHQEMSDS-SPVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQ- 331

Query: 291 KKMDGFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPEK 112
           + + GF QRLKGK+GRFRGNLSGKRV++TGRTVISPDPNLK+TEVAIP+LMA +LTYPE+
Sbjct: 332 RPLSGFTQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPER 391

Query: 111 VSKHNIEKLRQRVSNGSQKYPGANYIICHDDSRLSI 4
           VS+HNIEKLRQ V NG  KYPGA +I   D S +S+
Sbjct: 392 VSQHNIEKLRQCVRNGPNKYPGAKFIRHPDGSEISL 427


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           isoform X1 [Solanum tuberosum]
          Length = 1394

 Score =  238 bits (608), Expect = 9e-61
 Identities = 124/216 (57%), Positives = 157/216 (72%), Gaps = 2/216 (0%)
 Frame = -1

Query: 645 VQDDLTPLKVFNLFSKMIDEDCELLYLHGRPEKLIVTHMTVPPVAIRPSTMTDGG--SNE 472
           V  +L P  V++LF  M DEDCELLYL  RPEKL+VT + VPP+AIRPS   DGG  SNE
Sbjct: 214 VPPELDPKVVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNE 273

Query: 471 ADITMMLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQG 292
            DIT  L  I++ N +L  ++    S  + +  W  LQ+++  YINS++ G+   M +Q 
Sbjct: 274 NDITERLKRIIQANASLHQEMSDS-SPVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQ- 331

Query: 291 KKMDGFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPEK 112
           + + GF QRLKGK+GRFRGNLSGKRV++TGRTVISPDPNLK+TEVAIP+LMA +LTYPE+
Sbjct: 332 RPLSGFTQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPER 391

Query: 111 VSKHNIEKLRQRVSNGSQKYPGANYIICHDDSRLSI 4
           VS+HNIEKLRQ V NG  KYPGA +I   D S +S+
Sbjct: 392 VSQHNIEKLRQCVRNGPNKYPGAKFIRHPDGSEISL 427


>gb|EMJ09344.1| hypothetical protein PRUPE_ppa024521mg, partial [Prunus persica]
          Length = 867

 Score =  238 bits (608), Expect = 9e-61
 Identities = 118/212 (55%), Positives = 156/212 (73%), Gaps = 1/212 (0%)
 Frame = -1

Query: 633 LTPLKVFNLFSKMIDEDCELLYLHGRPEKLIVTHMTVPPVAIRPSTMTDGG-SNEADITM 457
           L P ++++LF +M+DEDCELL L  RP+ LI+ ++ VPP+AIRPS + D   SNE DIT 
Sbjct: 228 LNPARIYSLFKRMVDEDCELLNLSNRPQNLIIKNIAVPPIAIRPSVIVDRSLSNENDITE 287

Query: 456 MLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQGKKMDG 277
            L  I+++N  L  D+    S  +C+ +WD+LQ+++  YINS+I G+  SM +  K + G
Sbjct: 288 RLKRIIQSNAILRRDLLEAKSAPKCLASWDILQVEVAQYINSDIRGVPFSMQT-AKPLSG 346

Query: 276 FVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPEKVSKHN 97
           FVQRLKGK GRFRGNLSGKRV++TGRTVISPDPNLK+TEV +P+ MA +LTYPE+VS HN
Sbjct: 347 FVQRLKGKGGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGVPIKMAQILTYPERVSHHN 406

Query: 96  IEKLRQRVSNGSQKYPGANYIICHDDSRLSIR 1
           IEKLRQ VSNG  KYPGA  +   D +  S++
Sbjct: 407 IEKLRQCVSNGPDKYPGARMLRNPDGTEWSLK 438


>ref|XP_001416093.1| predicted protein [Ostreococcus lucimarinus CCE9901]
           gi|144576317|gb|ABO94385.1| predicted protein
           [Ostreococcus lucimarinus CCE9901]
          Length = 1395

 Score =  238 bits (608), Expect = 9e-61
 Identities = 114/206 (55%), Positives = 148/206 (71%), Gaps = 2/206 (0%)
 Frame = -1

Query: 645 VQDDLTPLKVFNLFSKMIDEDCELLYLHGRPEKLIVTHMTVPPVAIRPSTMTDG--GSNE 472
           VQDDL P++V  +  ++   DCELL +  RPE L++TH+ VPP  IRPS   DG  GSNE
Sbjct: 230 VQDDLNPIRVLGILQRVTSADCELLDIADRPEHLLLTHLPVPPCCIRPSVEMDGVSGSNE 289

Query: 471 ADITMMLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQG 292
            DITM L++I++ N  L   +E G ++   ME WD LQ+Q  +YINSE+PGL       G
Sbjct: 290 DDITMKLIQIIEVNNVLRQGLEKGLAVNNMMENWDFLQIQCAMYINSELPGLSLQYQGPG 349

Query: 291 KKMDGFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPEK 112
           K + GFVQRLKGK+GRFRGNLSGKRVDF+ RTVISPDPNL++ EV +P+ +A  +TYPE 
Sbjct: 350 KPLRGFVQRLKGKQGRFRGNLSGKRVDFSARTVISPDPNLRIDEVGVPIHIAKTMTYPEV 409

Query: 111 VSKHNIEKLRQRVSNGSQKYPGANYI 34
           V+KHN+  LR+RV NG  K+PGAN++
Sbjct: 410 VNKHNMVMLRERVRNGMAKHPGANFV 435


>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
           gi|548832896|gb|ERM95665.1| hypothetical protein
           AMTR_s00023p00196820 [Amborella trichopoda]
          Length = 1383

 Score =  237 bits (605), Expect = 2e-60
 Identities = 123/213 (57%), Positives = 153/213 (71%)
 Frame = -1

Query: 639 DDLTPLKVFNLFSKMIDEDCELLYLHGRPEKLIVTHMTVPPVAIRPSTMTDGGSNEADIT 460
           ++LTP +   LF +M+DEDC+LLYL+ RPEKLI+TH+ VPP  IRP+  +    NE ++T
Sbjct: 217 ENLTPQRALALFERMVDEDCDLLYLYDRPEKLIITHIAVPPAGIRPTYQSGSRLNENELT 276

Query: 459 MMLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQGKKMD 280
             L EIV+ N TL + +  G      M+ W LLQ+++ LYINSE+P L P      K   
Sbjct: 277 TKLWEIVQINHTLIDHVNKGNLPQYYMDTWVLLQVRVALYINSELPSL-PLNYQPSKFEG 335

Query: 279 GFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPEKVSKH 100
           G VQRLKGK+GRFR NL GKRVDFTGRTVISPDPNLK+TEVAIP LMA +LTY E+V+ H
Sbjct: 336 GLVQRLKGKQGRFRSNLEGKRVDFTGRTVISPDPNLKITEVAIPRLMAQILTYKERVTIH 395

Query: 99  NIEKLRQRVSNGSQKYPGANYIICHDDSRLSIR 1
           NIEKLRQ V NG  KYPGAN++I   D+ LS+R
Sbjct: 396 NIEKLRQCVRNGPVKYPGANFVISGGDT-LSLR 427


>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
           communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
           polymerase III largest subunit, putative [Ricinus
           communis]
          Length = 1383

 Score =  237 bits (605), Expect = 2e-60
 Identities = 122/208 (58%), Positives = 160/208 (76%), Gaps = 2/208 (0%)
 Frame = -1

Query: 633 LTPLKVFNLFSKMIDEDCELLYLHGRPEKLIVTHMTVPPVAIRPSTMTDG-GSNEADITM 457
           LTP+KV +LF ++ +EDCE+L L+ RPEKLI+T++ VPP++IRPS  TDG  SNE DIT 
Sbjct: 194 LTPVKVLSLFKRIPEEDCEVLGLYDRPEKLIITNIAVPPISIRPSVFTDGLQSNENDITE 253

Query: 456 MLLEIVKTNITLSNDIETG-YSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQGKKMD 280
            L +I++ N +L  ++  G  S+ + +++WD LQ  + LY+NS++    P+    GK + 
Sbjct: 254 RLKQIIQANASLRMELLEGRMSVNKYLDSWDGLQAAVALYMNSDVR--VPNNVEVGKPLS 311

Query: 279 GFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPEKVSKH 100
           GFVQRLKGK+GRFRGNLSGKRV+FTGRTVISPDPNLK+TEVAIP+ MA +L+YPE+VS H
Sbjct: 312 GFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMARILSYPERVSHH 371

Query: 99  NIEKLRQRVSNGSQKYPGANYIICHDDS 16
           NIEKLRQ VSNG QKYPGA+ +   D S
Sbjct: 372 NIEKLRQLVSNGPQKYPGASTVRYPDGS 399


>gb|EIN10167.1| beta and beta-prime subunits of DNA dependent RNA-polymerase
           [Punctularia strigosozonata HHB-11173 SS5]
          Length = 1405

 Score =  237 bits (604), Expect = 3e-60
 Identities = 121/207 (58%), Positives = 152/207 (73%), Gaps = 3/207 (1%)
 Frame = -1

Query: 645 VQDDLTPLKVFNLFSKMIDEDCELLYL---HGRPEKLIVTHMTVPPVAIRPSTMTDGGSN 475
           V +DL PLKV +LF ++ DEDCELL +    GRPE+ I  +++VPPVAIRPS   DG SN
Sbjct: 210 VHEDLNPLKVLDLFRRISDEDCELLGMKPEQGRPEEFIWQYISVPPVAIRPSVAQDGASN 269

Query: 474 EADITMMLLEIVKTNITLSNDIETGYSLTRCMEAWDLLQLQMGLYINSEIPGLYPSMSSQ 295
           E D+T+ L EIV TN  +   +  G    + ME W+ LQL + +YINSE+PG+ PS   Q
Sbjct: 270 EDDLTVKLTEIVFTNALIKQGLAKGAPTPQFMEQWEFLQLSVAMYINSELPGV-PSQMGQ 328

Query: 294 GKKMDGFVQRLKGKKGRFRGNLSGKRVDFTGRTVISPDPNLKVTEVAIPMLMAMVLTYPE 115
            K + GF QRLKGK+GRFRGNLSGKRVDF+GRTVISPDPNL++ EVA+P  +A +LTYPE
Sbjct: 329 -KPIRGFCQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPERVAKILTYPE 387

Query: 114 KVSKHNIEKLRQRVSNGSQKYPGANYI 34
           +V+ HNIEKLRQ V NG   +PGANY+
Sbjct: 388 RVTAHNIEKLRQAVRNGCDIHPGANYV 414