BLASTX nr result
ID: Ephedra27_contig00030598
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00030598
(544 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK27145.1| unknown [Picea sitchensis] 67 4e-09
gb|ABK23793.1| unknown [Picea sitchensis] 67 4e-09
sp|Q9ZST8.1|TIC20_PEA RecName: Full=Protein TIC 20, chloroplasti... 63 5e-08
gb|ABB86268.1| Tic20-like protein [Solanum tuberosum] 62 1e-07
gb|ABB72797.1| Tic20-like protein [Solanum tuberosum] 62 1e-07
ref|XP_004238025.1| PREDICTED: protein TIC 20-I, chloroplastic-l... 61 2e-07
ref|XP_004238024.1| PREDICTED: protein TIC 20-I, chloroplastic-l... 61 2e-07
ref|XP_006364983.1| PREDICTED: protein TIC 20-I, chloroplastic [... 60 3e-07
gb|AAF34764.1|AF227619_1 Tic20-like protein [Euphorbia esula] 60 3e-07
ref|XP_006657858.1| PREDICTED: protein TIC 20-I, chloroplastic-l... 60 4e-07
ref|XP_004506860.1| PREDICTED: protein TIC 20, chloroplastic-lik... 59 6e-07
ref|XP_004239772.1| PREDICTED: protein TIC 20-I, chloroplastic-l... 59 6e-07
ref|XP_006418078.1| hypothetical protein EUTSA_v10007024mg [Eutr... 59 7e-07
ref|XP_006305926.1| hypothetical protein CARUB_v10011153mg [Caps... 59 7e-07
ref|NP_171986.3| protein TIC 20 [Arabidopsis thaliana] gi|751515... 59 7e-07
gb|AFK44966.1| unknown [Lotus japonicus] 59 7e-07
gb|AFK40814.1| unknown [Lotus japonicus] 59 7e-07
gb|AFK40798.1| unknown [Lotus japonicus] 59 7e-07
ref|NP_001184910.1| HIT-type zinc finger family protein [Arabido... 59 7e-07
ref|XP_002889528.1| hypothetical protein ARALYDRAFT_887669 [Arab... 59 7e-07
>gb|ABK27145.1| unknown [Picea sitchensis]
Length = 285
Score = 66.6 bits (161), Expect = 4e-09
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Frame = +2
Query: 302 SSCISKRNEGLSVAFEPTTFLGKFGKLGSK-----SWNNLQDKRSVNSKASDP-SSYQGY 463
S C K E + F G++G N + R+V+ +A+D +Y+GY
Sbjct: 65 SPCTFKGCEPACTSASTPFFTGEYGSFRIHLPTIVRHNGRHNGRTVSPRAADDVPTYKGY 124
Query: 464 PPMTKKPAWWWRVLACLPYMVSFHIAW 544
PPMT KP WWWR LACLPY++ H W
Sbjct: 125 PPMTAKPKWWWRTLACLPYLMPLHETW 151
>gb|ABK23793.1| unknown [Picea sitchensis]
Length = 285
Score = 66.6 bits (161), Expect = 4e-09
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Frame = +2
Query: 302 SSCISKRNEGLSVAFEPTTFLGKFGKLGSK-----SWNNLQDKRSVNSKASDP-SSYQGY 463
S C K E + F G++G N + R+V+ +A+D +Y+GY
Sbjct: 65 SPCTFKGCEPACTSASTPFFTGEYGSFRIHLPTIVRHNGRHNGRTVSPRAADDVPTYKGY 124
Query: 464 PPMTKKPAWWWRVLACLPYMVSFHIAW 544
PPMT KP WWWR LACLPY++ H W
Sbjct: 125 PPMTAKPKWWWRTLACLPYLMPLHETW 151
>sp|Q9ZST8.1|TIC20_PEA RecName: Full=Protein TIC 20, chloroplastic; AltName:
Full=Translocon at the inner envelope membrane of
chloroplasts 20; Short=PsTIC20; Flags: Precursor
gi|3769673|gb|AAC64607.1| Tic20 [Pisum sativum]
Length = 253
Score = 62.8 bits (151), Expect = 5e-08
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +2
Query: 413 KRSVNSKASDPSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
K S +A+ SS +PPMTKKP WWWR L+C+PY++ FH AW
Sbjct: 76 KSSTTPRATKDSSGFRFPPMTKKPRWWWRTLSCIPYLLPFHQAW 119
>gb|ABB86268.1| Tic20-like protein [Solanum tuberosum]
Length = 271
Score = 61.6 bits (148), Expect = 1e-07
Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Frame = +2
Query: 251 PLSTAKLVCKRKSVTP---VSSCISKRNEGLSVAFEPTTFL-GKFGKLGSKSWNNL--QD 412
PLS + C ++S P +SC SK L ++ + L G++G L S + L +
Sbjct: 35 PLSKVIVTCVKRSPAPHQYPTSC-SKGFSFLDLSSASSLLLSGEYGGL-SNAIPQLPRRS 92
Query: 413 KRSVNSKASD--PSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
+ S + +AS P SY+ +PPMTKKP WWWR LACLPY++ H W
Sbjct: 93 QLSFSPRASKDVPYSYR-FPPMTKKPRWWWRTLACLPYLMPLHETW 137
>gb|ABB72797.1| Tic20-like protein [Solanum tuberosum]
Length = 194
Score = 61.6 bits (148), Expect = 1e-07
Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Frame = +2
Query: 251 PLSTAKLVCKRKSVTP---VSSCISKRNEGLSVAFEPTTFL-GKFGKLGSKSWNNL--QD 412
PLS + C ++S P +SC SK L ++ + L G++G L S + L +
Sbjct: 35 PLSKVIVTCVKRSPAPHQYPTSC-SKGFSFLDLSSASSLLLSGEYGGL-SNAIPQLPRRS 92
Query: 413 KRSVNSKASD--PSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
+ S + +AS P SY+ +PPMTKKP WWWR LACLPY++ H W
Sbjct: 93 QLSFSPRASKDVPYSYR-FPPMTKKPRWWWRTLACLPYLMPLHETW 137
>ref|XP_004238025.1| PREDICTED: protein TIC 20-I, chloroplastic-like isoform 2 [Solanum
lycopersicum]
Length = 271
Score = 61.2 bits (147), Expect = 2e-07
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Frame = +2
Query: 251 PLSTAKLVCKRKSVTP---VSSCISKRNEGLSVAFEPTTFLGKF--GKLGSKSWNNLQDK 415
PLS + C ++S P +SC SK L ++ + LG G L + + +
Sbjct: 35 PLSKVIVTCVKRSPAPHQYPTSC-SKGFSFLDLSSASSLLLGGEYGGLLNAIPQLPRRSQ 93
Query: 416 RSVNSKASD--PSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
S + +AS P SY+ +PPMTKKP WWWR LACLPY++ H W
Sbjct: 94 LSFSPRASKDVPYSYR-FPPMTKKPRWWWRTLACLPYLMPLHETW 137
>ref|XP_004238024.1| PREDICTED: protein TIC 20-I, chloroplastic-like isoform 1 [Solanum
lycopersicum]
Length = 286
Score = 61.2 bits (147), Expect = 2e-07
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Frame = +2
Query: 251 PLSTAKLVCKRKSVTP---VSSCISKRNEGLSVAFEPTTFLGKF--GKLGSKSWNNLQDK 415
PLS + C ++S P +SC SK L ++ + LG G L + + +
Sbjct: 50 PLSKVIVTCVKRSPAPHQYPTSC-SKGFSFLDLSSASSLLLGGEYGGLLNAIPQLPRRSQ 108
Query: 416 RSVNSKASD--PSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
S + +AS P SY+ +PPMTKKP WWWR LACLPY++ H W
Sbjct: 109 LSFSPRASKDVPYSYR-FPPMTKKPRWWWRTLACLPYLMPLHETW 152
>ref|XP_006364983.1| PREDICTED: protein TIC 20-I, chloroplastic [Solanum tuberosum]
Length = 271
Score = 60.1 bits (144), Expect = 3e-07
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Frame = +2
Query: 251 PLSTAKLVCKRKSVTP---VSSCISKRNEGLSVAFEPTTFL-GKFGKLGS---KSWNNLQ 409
PLS + C ++S P +SC SK L ++ + L G++G L + + Q
Sbjct: 35 PLSKVIVTCVKRSPAPHQNPTSC-SKGFSFLDLSSASSLLLSGEYGGLSNAIPQLPRRSQ 93
Query: 410 DKRSVNSKASDPSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
S + P SY+ +PPMTKKP WWWR LACLPY++ H W
Sbjct: 94 LFFSPRASKDVPYSYR-FPPMTKKPRWWWRTLACLPYLMPLHETW 137
>gb|AAF34764.1|AF227619_1 Tic20-like protein [Euphorbia esula]
Length = 267
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +2
Query: 281 RKSVTPVSSCISKRNEGLSVAFEPTTFL-GKFGKLGSKSWNNL-------QDKRSVNSKA 436
R S P+ + S+ ++ T FL G+ G++ W+ L K S +
Sbjct: 43 RCSSIPIEALTSRFWPSRGLSSGSTRFLTGEEGRI----WHTLPSFPTHKNSKLSPRAAK 98
Query: 437 SDPSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
PSS++ +PPMT+KP WWWR+LACLPY++ H W
Sbjct: 99 DVPSSFR-FPPMTRKPRWWWRMLACLPYLMPLHETW 133
>ref|XP_006657858.1| PREDICTED: protein TIC 20-I, chloroplastic-like [Oryza brachyantha]
Length = 273
Score = 59.7 bits (143), Expect = 4e-07
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +2
Query: 374 GKLGSKSWNNLQDKRSVNSKASDPSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
G L W+N + V +AS + YP +T KP WWWR LAC+PY++ H W
Sbjct: 81 GTLSLSRWHNYLRRPEVGCRASSSLASFSYPELTSKPRWWWRTLACVPYLLPLHNMW 137
>ref|XP_004506860.1| PREDICTED: protein TIC 20, chloroplastic-like [Cicer arietinum]
Length = 253
Score = 59.3 bits (142), Expect = 6e-07
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +2
Query: 431 KASDPSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
+A+ +S +PPMTKKP WWWR LACLPY++ FH W
Sbjct: 82 RATKDASGFRFPPMTKKPRWWWRTLACLPYLLPFHQVW 119
>ref|XP_004239772.1| PREDICTED: protein TIC 20-I, chloroplastic-like [Solanum
lycopersicum]
Length = 271
Score = 59.3 bits (142), Expect = 6e-07
Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Frame = +2
Query: 242 SSSPLSTAKLV--CKRKSVTP---VSSCISKRNEGLSVAFEPTTF-LGKFGKLGSKSWNN 403
S +PL +K + C R+S P +SC SK L ++ + G++G L S +
Sbjct: 30 SCNPLPPSKFLVACVRRSPAPHQYPTSC-SKGFNFLDLSSASSLLSTGEYGGL-SNAIPQ 87
Query: 404 L--QDKRSVNSKASD--PSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
L + + S+ +AS P SY+ +PPMTKKP WWWR LACLPY++ H W
Sbjct: 88 LPRRSQLSMTPRASKDVPYSYR-FPPMTKKPRWWWRTLACLPYLMPLHETW 137
>ref|XP_006418078.1| hypothetical protein EUTSA_v10007024mg [Eutrema salsugineum]
gi|557095849|gb|ESQ36431.1| hypothetical protein
EUTSA_v10007024mg [Eutrema salsugineum]
Length = 649
Score = 58.9 bits (141), Expect = 7e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 443 PSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
PSS++ +PPMTKKP WWWR LACLPY++ H W
Sbjct: 100 PSSFR-FPPMTKKPQWWWRTLACLPYLMPLHETW 132
>ref|XP_006305926.1| hypothetical protein CARUB_v10011153mg [Capsella rubella]
gi|482574637|gb|EOA38824.1| hypothetical protein
CARUB_v10011153mg [Capsella rubella]
Length = 636
Score = 58.9 bits (141), Expect = 7e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 443 PSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
PSS++ +PPMTKKP WWWR LACLPY++ H W
Sbjct: 99 PSSFR-FPPMTKKPQWWWRTLACLPYLMPLHETW 131
>ref|NP_171986.3| protein TIC 20 [Arabidopsis thaliana]
gi|75151589|sp|Q8GZ79.1|TI201_ARATH RecName:
Full=Protein TIC 20-I, chloroplastic; AltName:
Full=Translocon at the inner envelope membrane of
chloroplasts 20-I; Short=AtTIC20-I; Flags: Precursor
gi|26449432|dbj|BAC41843.1| unknown protein [Arabidopsis
thaliana] gi|332189644|gb|AEE27765.1| protein TIC 20
[Arabidopsis thaliana]
Length = 274
Score = 58.9 bits (141), Expect = 7e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 443 PSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
PSS++ +PPMTKKP WWWR LACLPY++ H W
Sbjct: 108 PSSFR-FPPMTKKPQWWWRTLACLPYLMPLHETW 140
>gb|AFK44966.1| unknown [Lotus japonicus]
Length = 271
Score = 58.9 bits (141), Expect = 7e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 443 PSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
PSS++ +PPMTKKP WWWR LACLPY++ H W
Sbjct: 105 PSSFR-FPPMTKKPRWWWRTLACLPYLMPLHETW 137
>gb|AFK40814.1| unknown [Lotus japonicus]
Length = 197
Score = 58.9 bits (141), Expect = 7e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 443 PSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
PSS++ +PPMTKKP WWWR LACLPY++ H W
Sbjct: 105 PSSFR-FPPMTKKPRWWWRTLACLPYLMPLHETW 137
>gb|AFK40798.1| unknown [Lotus japonicus]
Length = 207
Score = 58.9 bits (141), Expect = 7e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 443 PSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
PSS++ +PPMTKKP WWWR LACLPY++ H W
Sbjct: 41 PSSFR-FPPMTKKPRWWWRTLACLPYLMPLHETW 73
>ref|NP_001184910.1| HIT-type zinc finger family protein [Arabidopsis thaliana]
gi|332189643|gb|AEE27764.1| HIT-type zinc finger family
protein [Arabidopsis thaliana]
Length = 644
Score = 58.9 bits (141), Expect = 7e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 443 PSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
PSS++ +PPMTKKP WWWR LACLPY++ H W
Sbjct: 108 PSSFR-FPPMTKKPQWWWRTLACLPYLMPLHETW 140
>ref|XP_002889528.1| hypothetical protein ARALYDRAFT_887669 [Arabidopsis lyrata subsp.
lyrata] gi|297335370|gb|EFH65787.1| hypothetical protein
ARALYDRAFT_887669 [Arabidopsis lyrata subsp. lyrata]
Length = 273
Score = 58.9 bits (141), Expect = 7e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 443 PSSYQGYPPMTKKPAWWWRVLACLPYMVSFHIAW 544
PSS++ +PPMTKKP WWWR LACLPY++ H W
Sbjct: 107 PSSFR-FPPMTKKPQWWWRTLACLPYLMPLHETW 139