BLASTX nr result

ID: Ephedra27_contig00030554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00030554
         (1034 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001762579.1| predicted protein [Physcomitrella patens] gi...   170   1e-39
ref|XP_005842889.1| expressed protein [Chlorella variabilis] gi|...    64   1e-07
ref|XP_003287854.1| hypothetical protein DICPUDRAFT_152042 [Dict...    58   7e-06

>ref|XP_001762579.1| predicted protein [Physcomitrella patens] gi|162686312|gb|EDQ72702.1|
            predicted protein [Physcomitrella patens]
          Length = 1922

 Score =  170 bits (430), Expect = 1e-39
 Identities = 105/275 (38%), Positives = 154/275 (56%), Gaps = 18/275 (6%)
 Frame = -3

Query: 897  DDLRWNLPIDLLEELEKAKRHESLLLVLPWILEFLRIKKFTNSQACQLYFEKVLLSLKNL 718
            D  R   P+++   L KA+   S+LL LPW+LEFLR+ K          F+ +L SL+ +
Sbjct: 893  DVTRSEPPVNIPAVLSKAQIEGSVLLNLPWVLEFLRLLKADWLALSHPQFQTILFSLREV 952

Query: 717  YSIPALDPSSDNFGVSSMCIHAALDSFFEEMGLLDMDKRFP-----NSFPLE----DMLK 565
            Y +P L+P S+ FGV S+CI A+LD+FFE M L   +  +      N+ P++      ++
Sbjct: 953  YLLPMLNPLSEQFGVGSICILASLDAFFEYMDLAPHNSEWSKKDKTNTSPVQHREVSSVE 1012

Query: 564  NPNKTHVLSNGSTQKGIICSGVDRITGIVDSSYVQNFCPLLKEMRSLLSVVKKEEKLQRS 385
              +   +    + ++ +   G+D + GI+DS Y+Q+ CPLL E+R +L   KK    QR 
Sbjct: 1013 GEDTRRLSEIQADERPLTFKGLDTMLGIIDSRYIQHCCPLLMELRGVLVEGKKRRLRQRE 1072

Query: 384  QIY-------RNNSIRKITPVQSTKQGQAFHISNVVAEPSIMNV--AVEKENDELKLKLQ 232
              +       R  ++RKITPVQ     Q   IS+  A    +      E ++D+LKLKLQ
Sbjct: 1073 PNWPESPGFARTRTVRKITPVQRPGPSQTLDISSNSANGERITTEHGFESQDDQLKLKLQ 1132

Query: 231  NIFLDQRPHLQRLVDFLVDTVAVNAAHAATLKYVP 127
              FL+QRP L+R+VDF+VDT A NAA AA LK VP
Sbjct: 1133 RTFLEQRPQLRRVVDFVVDTAAGNAARAAVLKLVP 1167


>ref|XP_005842889.1| expressed protein [Chlorella variabilis]
           gi|307102504|gb|EFN50777.1| expressed protein [Chlorella
           variabilis]
          Length = 462

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 57/249 (22%), Positives = 102/249 (40%), Gaps = 9/249 (3%)
 Frame = -3

Query: 864 LEELEKAKRHESLLLVLPWILEFLRIKKFTNSQACQLYFEKVLLSLKNLYSIPALDPSSD 685
           +E    A     L   LPW++ +L    +        YF  +L  L  L+    L P   
Sbjct: 72  VEAAAAASEGGPLAWALPWVVRYLWFLPWDAEAVRAPYFRCLLARLAALHGSAELQPQQA 131

Query: 684 NFGVSSMCIHAALDSFFEEMGLLDMDKRFPNSFPLEDMLKNPNKTHVLSNGSTQKGIIC- 508
           +F +++ C+ + LD F E +G        P+  P       P  +   S+ S+  G  C 
Sbjct: 132 HFSLAAFCLRSVLDDFAERVG--------PDIMPTA-----PGSSG--SSSSSAGGATCP 176

Query: 507 --SGVDRITGIVDSSYVQNFCPLLKEMRSLLSVVKKEEKLQRSQIYRNNSIRKITPVQST 334
             S +  + G++DS ++   CP L+  R L +            + +    R++  ++ T
Sbjct: 177 ALSSLAAVDGLLDSRFLHLCCPTLEHSRQLFAA----SGGGGGGLQQQQQARRVKKIRPT 232

Query: 333 KQGQAFHISNVVAEPSIMNVAVEKENDELKLKLQNIFLDQ------RPHLQRLVDFLVDT 172
               A      +       +  +   D L+L+LQ  FL+Q      +  L+ +VD++ D 
Sbjct: 233 APSGAAAARTALQGGVAAALQQDASRDLLRLQLQRAFLEQYSTDEHKVKLRDVVDYVSDI 292

Query: 171 VAVNAAHAA 145
           +A NAA +A
Sbjct: 293 LAYNAASSA 301


>ref|XP_003287854.1| hypothetical protein DICPUDRAFT_152042 [Dictyostelium purpureum]
           gi|325082124|gb|EGC35617.1| hypothetical protein
           DICPUDRAFT_152042 [Dictyostelium purpureum]
          Length = 1689

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
 Frame = -3

Query: 876 PIDLLEELEKAKRHESLLLVLPWILEFLRIKKFTNSQACQLYFEKVLLSLKNLYSIPAL- 700
           PIDL   L    +HE+L ++LP +LEFL+++     +    YF + +  LKN+Y++P L 
Sbjct: 715 PIDLKSLLFSGIQHENLSIILPIVLEFLKLRDTVGRE--NHYFSEAINILKNIYNLPMLL 772

Query: 699 -DPSSDNFGVSSMCIHAALDSFFEEMGL 619
             P   N+  SS+ I   L+ FFEE+ +
Sbjct: 773 ATPIQPNYSFSSLFILFELEQFFEELSI 800


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