BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00030440
         (489 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty...    73   4e-11
ref|XP_006826143.1| hypothetical protein AMTR_s05704p00000690, p...    72   1e-10
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]    70   2e-10
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    70   2e-10
gb|AAF18630.1|AC006228_1 F5J5.1 [Arabidopsis thaliana]                 70   2e-10
ref|XP_003629120.1| Serine/threonine protein kinase SRPK1 [Medic...    70   3e-10
ref|XP_004516488.1| PREDICTED: uncharacterized protein LOC101511...    69   5e-10
ref|XP_004514317.1| PREDICTED: uncharacterized protein LOC101499...    69   5e-10
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]    68   1e-09
gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]                 68   1e-09
gb|AAX96614.1| retrotransposon protein, putative, unclassified [...    67   2e-09
gb|ABM55238.1| integrase [Beta vulgaris]                               67   2e-09
gb|ABH08430.1| putative integrase [Beta vulgaris]                      67   2e-09
dbj|BAB11308.1| copia-like retroelement pol polyprotein [Arabido...    67   3e-09
gb|ABW74566.1| integrase [Boechera divaricarpa]                        67   3e-09
gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana]              67   3e-09
ref|XP_004986769.1| PREDICTED: uncharacterized protein LOC101784...    66   4e-09
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...    66   4e-09
gb|ABA99612.1| retrotransposon protein, putative, unclassified [...    66   5e-09
gb|AAC95170.1| copia-like retroelement pol polyprotein [Arabidop...    66   5e-09

>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
            aspartic, catalytic [Medicago truncatula]
          Length = 1715

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 8/166 (4%)
 Frame = +1

Query: 10   KQLQCPWIINSGCSNHITGDLNL-IKEPKEHKSKVQFGNSQSSKAIAKGLPNL*GKLGSA 186
            ++ Q  W ++SGCS H+TG+  L +    +   +V+FG +Q+ K I  G   +     S 
Sbjct: 664  REKQRSWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTG--TIGNSSISI 721

Query: 187  GXXXXXXXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMN----NLYS 354
                          S+S+ CD+ Y +TF +    +++K   ++   G R  N    N   
Sbjct: 722  NNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSD 781

Query: 355  LDDN--TCLISQLETSQLWHKRLSHINFANILSLQQ-EAVSGLPTI 483
            L D    CL+S  +   +WHKRL H N+  I  + + + V GLP I
Sbjct: 782  LADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNI 827


>ref|XP_006826143.1| hypothetical protein AMTR_s05704p00000690, partial [Amborella
           trichopoda] gi|548830285|gb|ERM93380.1| hypothetical
           protein AMTR_s05704p00000690, partial [Amborella
           trichopoda]
          Length = 453

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
 Frame = +1

Query: 28  WIINSGCSNHITGDLNLIKEPKEHK-SKVQFGNSQSSKAIAKGLPNL*GKLGSAGXXXXX 204
           W  +SGCS H+TG+  L+   K+ K   V FG+    +   +G  N+ G           
Sbjct: 204 WYFDSGCSRHMTGNKKLLVNFKDEKGGSVTFGDGNKGQIAGRGDVNVNG-AAQLTNVLYV 262

Query: 205 XXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMNNLYSLDDN-TCLIS 381
                   S+ +LCD +  ++F +   +V   S G V+ TG RT++  Y++ +   C  +
Sbjct: 263 RGLKANLISIGQLCDDNLSVSFTKTQCLV--SSDGCVVLTGNRTVDQCYAVCNTIVCNRT 320

Query: 382 QLETSQLWHKRLSHINFANILSL-QQEAVSGLPTIK 486
            L+   LWH RL H+N+ ++  L + +AV G+P +K
Sbjct: 321 FLDKPDLWHYRLGHLNYRDLQRLVKLQAVRGIPDMK 356


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
 Frame = +1

Query: 28  WIINSGCSNHITGDLNLIKEPKE-HKSKVQFGNSQSSKAIAKGL---PNL*GKLGSAGXX 195
           W ++SGCSNH+TG  +L KE  E HK KV+ G+ +      KG+    N  G +      
Sbjct: 306 WFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGKGIMAVNNGHGNVKLLYNV 365

Query: 196 XXXXXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMNNLY-----SLD 360
                      SV +L    Y I FD    ++ DK S  +I       N L+     S++
Sbjct: 366 YFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVNVRMAANKLFPLEVSSIE 425

Query: 361 DNTCLISQLETSQLWHKRLSHINFANI-LSLQQEAVSGLPTI 483
            +  ++ +   S LWH R  H+N   + L  ++E V GLP I
Sbjct: 426 KHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKI 467


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
 Frame = +1

Query: 28  WIINSGCSNHITGDLNLIKEPKE-HKSKVQFGNSQSSKAIAKG---LPNL*GKLGSAGXX 195
           W ++SGCSNH+TG  +L KE  E HK KV+ G+ +  +   KG   + N  G +      
Sbjct: 291 WFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVQVEGKGTXAVNNGHGNVKLLYNV 350

Query: 196 XXXXXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMNNLY-----SLD 360
                      SV +L    Y I FD    ++ DK S  +I       N L+     S++
Sbjct: 351 YFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVBVRMAANKLFPLEVSSIE 410

Query: 361 DNTCLISQLETSQLWHKRLSHINFANI-LSLQQEAVSGLPTI 483
            +  ++ +   S LWH R  H+N   + L  ++E V GLP I
Sbjct: 411 KHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKI 452


>gb|AAF18630.1|AC006228_1 F5J5.1 [Arabidopsis thaliana]
          Length = 1463

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
 Frame = +1

Query: 28   WIINSGCSNHITGDLNLIKEPKE-HKSKVQFGNSQSSKAIAKGLPNL*GKLGSAGXXXXX 204
            W  +SGCS H+TG  +++K+    +  KV FG+        KG   +  +          
Sbjct: 563  WYFDSGCSRHMTGVQSILKDFSVINNGKVTFGDGGKGSIKGKGKIEIDDQ-PHLSNVYFV 621

Query: 205  XXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMNNLYSLDDN-TCLIS 381
                    S+S+LCD D  +TF + G + +D +  NV+ +G  + NN Y   D+  CL +
Sbjct: 622  EGLTANLISISQLCDDDLTVTFTKTGCVALDIAGNNVL-SGVCSGNNCYMWKDSEVCLSA 680

Query: 382  QLETSQLWHKRLSHINFANILSL-QQEAVSGLPTIK 486
                  LWH+RL H+N  +++ +   + V G+P ++
Sbjct: 681  ITSKLDLWHQRLRHMNTQSLVKIVNADVVRGIPKLE 716


>ref|XP_003629120.1| Serine/threonine protein kinase SRPK1 [Medicago truncatula]
            gi|355523142|gb|AET03596.1| Serine/threonine protein
            kinase SRPK1 [Medicago truncatula]
          Length = 1025

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 8/166 (4%)
 Frame = +1

Query: 10   KQLQCPWIINSGCSNHITGDLNL-IKEPKEHKSKVQFGNSQSSKAIAKGLPNL*GKLGSA 186
            ++ Q  W ++SGCS H+TG+  L +    +   +V+FG +Q+ K I  G   +     S 
Sbjct: 664  REKQRSWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTG--TIGNSSISI 721

Query: 187  GXXXXXXXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMN----NLYS 354
                          S+S+ CD+ Y + F +    +++K   ++   G R  N    N   
Sbjct: 722  NNVWLVDGLKHNLLSISQFCDNGYDVMFSKTNCTLVNKDDKSITFKGKRVENVYKINFSD 781

Query: 355  LDDN--TCLISQLETSQLWHKRLSHINFANILSLQQ-EAVSGLPTI 483
            L D    CL+S  +   +WHKRL H N+  I  + + + V G P I
Sbjct: 782  LADQKVVCLLSMNDKKWVWHKRLGHANWRLIFKISKLQVVKGFPNI 827


>ref|XP_004516488.1| PREDICTED: uncharacterized protein LOC101511546 [Cicer arietinum]
          Length = 399

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 13/166 (7%)
 Frame = +1

Query: 28  WIINSGCSNHITGDLN-LIKEPKEHKSKVQFGNSQSSKAIAKGLPNL*GKLGSAGXXXXX 204
           W ++SGCS H+TGD +  +    +    V++G++   K I  G       +G+       
Sbjct: 177 WYLDSGCSKHMTGDKSKFLSLTLKEGGFVKYGDNNRGKIIGIG------DIGNESTTVIK 230

Query: 205 XXXXXXXX-----SVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMNNLYSLDDNT 369
                        S+S+LCD  + ++F  +  I+  K   N+   G R +NN+Y LD N+
Sbjct: 231 NVLYVEGLKHNLLSISQLCDKGFQVSFSSQSCIIEHKDDKNIKLIGDR-INNIYMLDFNS 289

Query: 370 ------CLISQLETSQLWHKRLSHINFANILSL-QQEAVSGLPTIK 486
                 CL+S  + + LWHKR++HI+  ++  L  ++ V GLP  K
Sbjct: 290 VPSAVCCLLSNQDETWLWHKRIAHIHINHLNKLVSKQLVIGLPNRK 335


>ref|XP_004514317.1| PREDICTED: uncharacterized protein LOC101499663 [Cicer arietinum]
          Length = 421

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 13/166 (7%)
 Frame = +1

Query: 28  WIINSGCSNHITGDLN-LIKEPKEHKSKVQFGNSQSSKAIAKGLPNL*GKLGSAGXXXXX 204
           W ++SGCS H+TGD +  +    +    V++G++   K I  G       +G+       
Sbjct: 177 WYLDSGCSKHMTGDKSKFLSLTLKEGGFVKYGDNNRGKIIGIG------DIGNESTTVIK 230

Query: 205 XXXXXXXX-----SVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMNNLYSLDDNT 369
                        S+S+LCD  + ++F  +  I+  K   N+   G R +NN+Y LD N+
Sbjct: 231 NVLYVEGLKHNLLSISQLCDKGFQVSFSSQSCIIEHKDDKNIKLIGDR-INNIYMLDFNS 289

Query: 370 ------CLISQLETSQLWHKRLSHINFANILSL-QQEAVSGLPTIK 486
                 CL+S  + + LWHKR++HI+  ++  L  ++ V GLP  K
Sbjct: 290 VPSAVCCLLSNQDETWLWHKRIAHIHINHLNKLVSKQLVIGLPNRK 335


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
 Frame = +1

Query: 28  WIINSGCSNHITGDLNLIKEPKE-HKSKVQFGNSQSSKAIAKG---LPNL*GKLGSAGXX 195
           W ++SGCSNH+TG  +L KE  E HK KV+ G+ +      KG   + N  G +      
Sbjct: 292 WFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGKGTVAVNNGHGNVKLLYNV 351

Query: 196 XXXXXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMNNLY-----SLD 360
                      SV +L    Y I FD    ++ DK    +I       N L+     S++
Sbjct: 352 YFIPSLTQNLLSVGQLMVSGYSILFDGSTCVIKDKKFDQIIVDVRMAANKLFPLEVSSIE 411

Query: 361 DNTCLISQLETSQLWHKRLSHINFANI-LSLQQEAVSGLPTI 483
            +  ++ +   S LWH R  H+N   + L  ++E V GLP I
Sbjct: 412 KHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKI 453


>gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]
          Length = 2319

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
 Frame = +1

Query: 28   WIINSGCSNHITGDLNLIK--EPKEHKSKVQFGNSQSSKAIAKGLPNL*GKLGSAGXXXX 201
            W+++SGC+NH+TG+ ++    +  +   ++ FG+S  SK I  G   +     S      
Sbjct: 735  WVLDSGCTNHMTGEKDMFHTLQLTQEAQEIVFGDSGKSKVIGIGKIPI-SDQQSLSNVLL 793

Query: 202  XXXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMNNLYSLD------- 360
                     SVS+LC   Y   F    + ++ +   +V  TG R    LY +D       
Sbjct: 794  VDSLSYNLLSVSQLCGMGYNCLFSDVDVKILRREDSSVAFTG-RLKGKLYLVDFTTSKVT 852

Query: 361  DNTCLISQLETSQLWHKRLSHINFANILSLQQE 459
              TCL+++ +   LWH+RL+H+   N+  LQ++
Sbjct: 853  PETCLVAKSDKGWLWHRRLAHVGMRNLAKLQKD 885


>gb|AAX96614.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|77550183|gb|ABA92980.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 1427

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 11/165 (6%)
 Frame = +1

Query: 28   WIINSGCSNHITGDLNLIKEPKE--HKSKVQFGNSQSSKAIAKGLPNL*GKLGSAGXXXX 201
            WI++ GCS H+TGD N     K+      + FG++ +S  +A GL  +  K         
Sbjct: 781  WIVDPGCSRHMTGDKNWFSSLKKTSKTESIIFGDASTSAVLATGLVKVNEKF-ELKNVAL 839

Query: 202  XXXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMNNLYSLD-DN---- 366
                     SVS++ D D+ + F + G  V D    +V+         ++  D DN    
Sbjct: 840  VEDLKYNLLSVSQIVDEDFEVHFKKTGSKVFDSCGDSVLNIS--RYGRVFKADFDNPVSP 897

Query: 367  --TCLISQLETS-QLWHKRLSHINFANILSLQ-QEAVSGLPTIKK 489
              TCL+++ +     WH+RL H+ F ++  L   + V GLP +KK
Sbjct: 898  VITCLVAKFDKDVMFWHRRLRHVGFGHVTRLSGLDLVHGLPKLKK 942


>gb|ABM55238.1| integrase [Beta vulgaris]
          Length = 1516

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
 Frame = +1

Query: 28   WIINSGCSNHITGDLNLIKEPKEHKS-KVQFGNSQSSKAIAKGLPNL*GKLGSAGXXXXX 204
            W ++SGCS H+TGD         ++   V FG+++    +A G                 
Sbjct: 571  WYLDSGCSKHMTGDKTKFLSLTTYEGGSVTFGDNKKGNIVAMG--------------KVV 616

Query: 205  XXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMNNLYSLD-------D 363
                    S+S+ CD    + FD++  ++I+  +  VI  GTR   N Y +D       +
Sbjct: 617  EGLKHNLLSISQFCDKGNTVKFDKEKCLIINIKTKKVILEGTRK-GNTYIVDLDLVPQIN 675

Query: 364  NTCLISQLETSQLWHKRLSHINFANILSLQ-QEAVSGLPTIK 486
             TCL    + S LWHKRL H +F+ +  L+ ++ V GLP+IK
Sbjct: 676  LTCLSVIEDDSLLWHKRLGHASFSLLEKLRSKDLVLGLPSIK 717


>gb|ABH08430.1| putative integrase [Beta vulgaris]
          Length = 1516

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
 Frame = +1

Query: 28   WIINSGCSNHITGDLNLIKEPKEHKS-KVQFGNSQSSKAIAKGLPNL*GKLGSAGXXXXX 204
            W ++SGCS H+TGD         ++   V FG+++    +A G                 
Sbjct: 571  WYLDSGCSKHMTGDKTKFLSLTTYEGGSVTFGDNKKGNIVAMG--------------KVV 616

Query: 205  XXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMNNLYSLD-------D 363
                    S+S+ CD    + FD++  ++I+  +  VI  GTR   N Y +D       +
Sbjct: 617  EGLKHNLLSISQFCDKGNTVKFDKEKCLIINIKTKKVILEGTRK-GNTYIVDLDLVPQIN 675

Query: 364  NTCLISQLETSQLWHKRLSHINFANILSLQ-QEAVSGLPTIK 486
             TCL    + S LWHKRL H +F+ +  L+ ++ V GLP+IK
Sbjct: 676  LTCLSVIEDDSLLWHKRLGHASFSLLEKLRSKDLVLGLPSIK 717


>dbj|BAB11308.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1013

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
 Frame = +1

Query: 25   PWIINSGCSNHITGD-LNLIKEPKEHKSKVQFGNSQSSKAIAKG------LPNL*GKLGS 183
            PW  +SG S H+TG   NL       +S V FG     +   KG       P+L      
Sbjct: 613  PWYFDSGASRHMTGSQANLNNYSSVKESNVMFGGGAKGRIKGKGDLTETEKPHLTNVYFV 672

Query: 184  AGXXXXXXXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMNNLYSLDD 363
             G             SVS+LCD    ++F++      ++ + N + TG RT NN Y  ++
Sbjct: 673  EGLTANLI-------SVSQLCDEGLTVSFNKVKCWATNERNQNTL-TGVRTGNNCYMWEE 724

Query: 364  -NTCLISQLETSQLWHKRLSHINFANILSL-QQEAVSGLPTIK 486
               CL ++ E   LWH+RL H+N  ++  L  +E V G+P +K
Sbjct: 725  PKICLRAEKEDPVLWHQRLGHMNARSMSKLVNKEMVRGVPELK 767


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 10/162 (6%)
 Frame = +1

Query: 28  WIINSGCSNHITGDLNLIKEPKE-HKSKVQFGNSQSSKAIAKG---LPNL*GKLGSAGXX 195
           W ++SGCSNH+TG  +  KE  E HK KV+ GN +  +   +G   + N  G L      
Sbjct: 147 WYLDSGCSNHMTGTKSSFKELDESHKLKVKLGNDKEVQVEGRGVVAVHNGHGNLKLIYGV 206

Query: 196 XXXXXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMNNLYSLD----D 363
                      SV ++ +++  + FD    ++ +K SG  +    +T NNLY L+    +
Sbjct: 207 YYIPDLAHNLLSVGQMVENNCSVLFDGNECVIKEKKSGVTLAMVKKTSNNLYPLEMSSVE 266

Query: 364 NTCLISQL-ETSQLWHKRLSHINFANILSL-QQEAVSGLPTI 483
              L++++ + S+L H R  H++   +  L Q++ V GLP I
Sbjct: 267 TKALVAKVSDISKLLHLRYGHLHENGLRVLNQKDMVIGLPKI 308


>gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana]
          Length = 1643

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
 Frame = +1

Query: 25   PWIINSGCSNHITGD-LNLIKEPKEHKSKVQFGNSQSSKAIAKG------LPNL*GKLGS 183
            PW  +SG S H+TG   NL       +S V FG     +   KG       P+L      
Sbjct: 613  PWYFDSGASRHMTGSQANLNNYSSVKESNVMFGGGAKGRIKGKGDLTETEKPHLTNVYFV 672

Query: 184  AGXXXXXXXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMNNLYSLDD 363
             G             SVS+LCD    ++F++      ++ + N + TG RT NN Y  ++
Sbjct: 673  EGLTANLI-------SVSQLCDEGLTVSFNKVKCWATNERNQNTL-TGVRTGNNCYMWEE 724

Query: 364  -NTCLISQLETSQLWHKRLSHINFANILSL-QQEAVSGLPTIK 486
               CL ++ E   LWH+RL H+N  ++  L  +E V G+P +K
Sbjct: 725  PKICLRAEKEDPVLWHQRLGHMNARSMSKLVNKEMVRGVPELK 767


>ref|XP_004986769.1| PREDICTED: uncharacterized protein LOC101784335 [Setaria italica]
          Length = 750

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
 Frame = +1

Query: 28  WIINSGCSNHITGD---LNLIKEPKEHKSKVQFGNSQSSKAIAKGLPNL*GKLGSAGXXX 198
           W+++SG + H+ GD      + E  +   K+ FG+++  K    G  ++  +        
Sbjct: 57  WVVDSGYTQHMIGDSQKFTTLSEDTQGHEKITFGDNECGKVEGVGSIDV-SQYHILSNVL 115

Query: 199 XXXXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMNNLYSLDDN---- 366
                     S+++LCDH + +TF  +G+ V  KS+ ++I  G R  +NLY +D +    
Sbjct: 116 FVESLNFNLLSMAQLCDHGFKVTFTDEGMEVTRKSNDDIILKGFR-FHNLYFVDFSSKEA 174

Query: 367 ---TCLISQLETSQLWHKRLSHINFANILSLQQEAVS 468
              TCL ++     LWH RL+H+    +  L ++ +S
Sbjct: 175 NLTTCLFTKTSKGWLWHTRLAHVGMGTLKKLLKKDLS 211


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108711922|gb|ABF99717.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
 Frame = +1

Query: 28  WIINSGCSNHITGDLNLIKE-PKEHKSKVQFGNSQSSKAIAKGLPNL*GKLGS--AGXXX 198
           W+I+SGC+NH+  D NL +E    + +K+  GN   +++  KG   +    G        
Sbjct: 326 WVIDSGCTNHMAADPNLFREMDSSYHAKIHMGNGSIAQSEGKGTVAVQTADGPKFIKDVL 385

Query: 199 XXXXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMNNLYSLDDN---- 366
                     S+ +L +H Y + F+     ++D+ +  ++       N  + L  N    
Sbjct: 386 LVPDLKQNLLSIGQLLEHGYAVYFEDFSCKILDRKNNRLVAKINMEKNRNFLLRMNHTTQ 445

Query: 367 TCLISQLETSQLWHKRLSHINFANILSLQQEA-VSGLPTI 483
             L S+++ S LWHKR+ H+N+  +  L+ +  V GLP I
Sbjct: 446 MALRSEVDISDLWHKRMGHLNYRALKLLRTKGMVQGLPFI 485


>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1198

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
 Frame = +1

Query: 28  WIINSGCSNHITGDLNLIKE-PKEHKSKVQFGNSQSSKAIAKGLPNL*GKLGS--AGXXX 198
           W+I+SGC+NH+  D NL +E    + +K+  GN   +++  KG   +    G        
Sbjct: 277 WVIDSGCTNHMAADPNLFREMDSSYHAKIHMGNGSIAQSEGKGTVAVQTADGPKFIKDVL 336

Query: 199 XXXXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIG--TGTRTMNNLYSLDDNT- 369
                     S+ +L +H Y + F+     ++D+ +  ++      + +N L  ++  T 
Sbjct: 337 LVPDLKQNLLSIGQLLEHGYAVYFEDFSCKILDRKNNRLVAKINMEKNINFLLRMNHPTQ 396

Query: 370 -CLISQLETSQLWHKRLSHINFANILSLQQEA-VSGLPTI 483
             L S+++ S LWHKR+ H+N+  +  L+ +  V GLP I
Sbjct: 397 MALRSEIDISDLWHKRMGHLNYRALKLLRTKGMVQGLPFI 436


>gb|AAC95170.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 916

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
 Frame = +1

Query: 25  PWIINSGCSNHITGDL-NLIKEPKEHKSKVQFGNSQSSKAIAKG------LPNL*GKLGS 183
           PW  +SG S H+TG   NL       +SKV FG     K   KG       P L      
Sbjct: 516 PWYFDSGASRHMTGSQSNLENYTSVKESKVTFGGGDKGKIKGKGDLTKAEKPQLTNVYFV 575

Query: 184 AGXXXXXXXXXXXXXSVSKLCDHDYIITFDRKGLIVIDKSSGNVIGTGTRTMNNLYSLDD 363
            G             SVS+LCD    ++F+       ++ + N + TG RT NN Y  ++
Sbjct: 576 EGLTANLI-------SVSQLCDEGLTVSFNSVKCWATNEKNQNTL-TGVRTGNNCYMWEE 627

Query: 364 -NTCLISQLETSQLWHKRLSHINFANILSL-QQEAVSGLPTIK 486
              CLI++ E   +WH+RL H+N  ++  +  +E V G+  +K
Sbjct: 628 PKECLIAEKEDRVVWHQRLGHMNARSMSEIVSKEMVRGVQELK 670