BLASTX nr result

ID: Ephedra27_contig00030394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00030394
         (484 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006403183.1| hypothetical protein EUTSA_v10003343mg [Eutr...    55   1e-05

>ref|XP_006403183.1| hypothetical protein EUTSA_v10003343mg [Eutrema salsugineum]
           gi|557104296|gb|ESQ44636.1| hypothetical protein
           EUTSA_v10003343mg [Eutrema salsugineum]
          Length = 408

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 20/178 (11%)
 Frame = -2

Query: 483 LSCLVRVSVASHNDMIHVSKPWRNLLLDRDSEFYRLRSQLVLEQTIVYLVPEVPITE--- 313
           L+CL RVS + H  +  VSK  R+L++  D   Y  RS++   +  +Y+    P +    
Sbjct: 39  LNCLARVSRSDHRALSQVSKSSRSLVVSPD--LYETRSRMGFTEDCIYICLLAPYSRNPV 96

Query: 312 ----IRERGTGFLNR-------------HAVLCPHKSQILVMGGEQLVEEEGFIPCTDFF 184
               IR RG G  NR              A   P  S+I V+GG    E    +      
Sbjct: 97  GWFTIRWRGRGEENRLTRIPMPPFPTPNRATFVPLGSRIYVIGGSISAESTSRVS----- 151

Query: 183 IVDTLTRKIGRGPNMLFSTSAIACSAFGVMNNRLYVAGGATEGDYESSQWSTWVQCYD 10
            +D  T    + P+M     A A ++ GV++ ++YV GG  +GD      S W + +D
Sbjct: 152 FLDCRTHTWSQVPSM---RVARAAASAGVLDGKIYVMGGCWDGDP-----SNWAEVFD 201


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