BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00030213
         (433 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containi...    93   4e-17
emb|CBI29825.3| unnamed protein product [Vitis vinifera]               82   1e-13
ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containi...    82   1e-13
ref|XP_002529510.1| pentatricopeptide repeat-containing protein,...    82   1e-13
ref|XP_006848380.1| hypothetical protein AMTR_s00013p00202120 [A...    79   5e-13
ref|XP_006301385.1| hypothetical protein CARUB_v10021797mg [Caps...    75   9e-12
ref|NP_178072.1| pentatricopeptide repeat-containing protein [Ar...    75   1e-11
ref|XP_006389878.1| hypothetical protein EUTSA_v10018150mg [Eutr...    74   2e-11
ref|XP_002889252.1| pentatricopeptide repeat-containing protein ...    72   6e-11
ref|XP_004295543.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    71   2e-10
gb|EOY31969.1| Pentatricopeptide repeat (PPR) superfamily protei...    69   5e-10
ref|XP_002307458.2| pentatricopeptide repeat-containing family p...    69   7e-10
ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
gb|EMJ22798.1| hypothetical protein PRUPE_ppa026817mg, partial [...    64   2e-08
gb|EMT10479.1| hypothetical protein F775_13853 [Aegilops tauschii]     64   3e-08
gb|EOY05751.1| Pentatricopeptide repeat superfamily protein, put...    63   4e-08
ref|XP_006492928.1| PREDICTED: pentatricopeptide repeat-containi...    63   5e-08
ref|XP_006421323.1| hypothetical protein CICLE_v10004347mg [Citr...    63   5e-08
ref|NP_188906.1| pentatricopeptide repeat-containing protein [Ar...    62   6e-08

>ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 60/145 (41%), Positives = 80/145 (55%), Gaps = 6/145 (4%)
 Frame = +3

Query: 9   DKLGFVSSRA---VIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQT 179
           D L  +SSR     I ++   + D    F LF+WS K  HLR    ++D +I  L K   
Sbjct: 50  DGLKVISSRIRSYTITSVLQEQPDTRLGFRLFIWSLKSWHLR-CRTVQDLIIGKLIKENA 108

Query: 180 FETAWEVLRQRKNN---VDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLN 350
           FE  W+VL++ KN+   +    F VL++AY  AGM EKAVE+F LM  +F CKPD+   N
Sbjct: 109 FELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLM-RDFDCKPDLFAFN 167

Query: 351 TLLHVLVSSGGIELANVVYRERMLK 425
            +LH LV      LA  VY + MLK
Sbjct: 168 LILHFLVRKEAFLLALAVYNQ-MLK 191


>ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 60/145 (41%), Positives = 80/145 (55%), Gaps = 6/145 (4%)
 Frame = +3

Query: 9   DKLGFVSSRA---VIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQT 179
           D L  +SSR     I ++   + D    F LF+WS K  HLR    ++D +I  L K   
Sbjct: 50  DGLKVISSRIRSYTITSVLQEQPDTRLGFRLFIWSLKSWHLR-CRTVQDLIIGKLIKENA 108

Query: 180 FETAWEVLRQRKNN---VDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLN 350
           FE  W+VL++ KN+   +    F VL++AY  AGM EKAVE+F LM + F CKPD+   N
Sbjct: 109 FELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRD-FDCKPDLFAFN 167

Query: 351 TLLHVLVSSGGIELANVVYRERMLK 425
            +LH LV      LA  VY + MLK
Sbjct: 168 LILHFLVRKEAFLLALAVYNQ-MLK 191


>emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 54/144 (37%), Positives = 83/144 (57%), Gaps = 4/144 (2%)
 Frame = +3

Query: 6   LDKLG-FVSSRAVIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQTF 182
           L+KL  F+SS  V   +++ +      F  F+W+T++   R +    + VID L K+  F
Sbjct: 55  LEKLAPFLSSEIVNDVMRE-QRRPELGFRFFIWTTRRRSFR-SWVTHNLVIDMLAKDDGF 112

Query: 183 ETAWEVLRQRKNN---VDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLNT 353
           +T W++L + KN+   +    F VL+ AY  +GM EKAVE+F  M++ F CKPD+   N+
Sbjct: 113 DTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKD-FGCKPDVFTYNS 171

Query: 354 LLHVLVSSGGIELANVVYRERMLK 425
           +LHV+V      LA  VY + MLK
Sbjct: 172 ILHVMVQKEVFLLALAVYNQ-MLK 194


>ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 54/144 (37%), Positives = 83/144 (57%), Gaps = 4/144 (2%)
 Frame = +3

Query: 6   LDKLG-FVSSRAVIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQTF 182
           L+KL  F+SS  V   +++ +      F  F+W+T++   R +    + VID L K+  F
Sbjct: 55  LEKLAPFLSSEIVNDVMRE-QRRPELGFRFFIWTTRRRSFR-SWVTHNLVIDMLAKDDGF 112

Query: 183 ETAWEVLRQRKNN---VDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLNT 353
           +T W++L + KN+   +    F VL+ AY  +GM EKAVE+F  M++ F CKPD+   N+
Sbjct: 113 DTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKD-FGCKPDVFTYNS 171

Query: 354 LLHVLVSSGGIELANVVYRERMLK 425
           +LHV+V      LA  VY + MLK
Sbjct: 172 ILHVMVQKEVFLLALAVYNQ-MLK 194


>ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531026|gb|EEF32879.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 804

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 3/144 (2%)
 Frame = +3

Query: 3   LLDKLGFVSSRAVIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQTF 182
           L  K+ F+S   V   +K+   ++   F  F+W++K   LR      + +ID L K+  F
Sbjct: 50  LESKVPFLSPSIVTYIIKN-PPNSLLGFRFFIWASKFRRLRSWVS-HNMIIDMLIKDNGF 107

Query: 183 ETAWEVLRQRKN---NVDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLNT 353
           E  W+VL++ K    ++    F VL++AY    M+EKAVE+F++M++ F CKPD+   NT
Sbjct: 108 ELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKD-FDCKPDVFTYNT 166

Query: 354 LLHVLVSSGGIELANVVYRERMLK 425
           +LHV+V    + LA  +Y  RMLK
Sbjct: 167 VLHVMVRKEVVLLALGIY-NRMLK 189


>ref|XP_006848380.1| hypothetical protein AMTR_s00013p00202120 [Amborella trichopoda]
           gi|548851686|gb|ERN09961.1| hypothetical protein
           AMTR_s00013p00202120 [Amborella trichopoda]
          Length = 789

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 3/138 (2%)
 Frame = +3

Query: 24  VSSRAVIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQTFETAWEVL 203
           +S   V   LK+ E D    F  F+WS++ + L+ + D  +++ID L+  Q FE+AW++L
Sbjct: 58  ISPNVVASVLKE-EKDPKLGFRFFIWSSRHTALK-SWDSHNSMIDKLQGMQDFESAWKLL 115

Query: 204 RQ---RKNNVDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLNTLLHVLVS 374
            +    K+ +    F V++ AY   GM EKAVE F  M E F+C+P+    NT+LH+L+ 
Sbjct: 116 EELKISKHPISPEAFAVMISAYTKLGMAEKAVECFSKMVE-FNCRPNTFTYNTILHLLME 174

Query: 375 SGGIELANVVYRERMLKD 428
                +A  VY + +  D
Sbjct: 175 EEVFPVAFAVYNQMLKVD 192


>ref|XP_006301385.1| hypothetical protein CARUB_v10021797mg [Capsella rubella]
           gi|482570095|gb|EOA34283.1| hypothetical protein
           CARUB_v10021797mg [Capsella rubella]
          Length = 780

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 49/139 (35%), Positives = 78/139 (56%), Gaps = 4/139 (2%)
 Frame = +3

Query: 21  FVSSRAVIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQTFETAWEV 200
           F+S++ +   +KD E +    F  F+W++++  LR + D    VI+ L ++   +  W+ 
Sbjct: 57  FLSNKIITSVIKD-EVNPRLGFRFFIWASRRERLR-SRDSFGLVINMLSQDDGCDLYWQT 114

Query: 201 LRQRKN---NVDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLNTLLHVLV 371
           L + K+   +VD + F VL+ AY   GM EKAVE+F  M +EF C+PD+   N +L V++
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRM-KEFDCRPDVFTYNVILRVMM 173

Query: 372 -SSGGIELANVVYRERMLK 425
                  LA  VY E MLK
Sbjct: 174 REEVFFMLAFAVYNE-MLK 191


>ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g79540 gi|4835755|gb|AAD30222.1|AC007202_4 Contains
           similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
           gi|332198140|gb|AEE36261.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
 Frame = +3

Query: 21  FVSSRAVIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQTFETAWEV 200
           F+S   +   +KD E +    F  F+W++++  LR        VID L ++   +  W+ 
Sbjct: 57  FLSKNIITSVIKD-EVNRQLGFRFFIWASRRERLRSRESF-GLVIDMLSEDNGCDLYWQT 114

Query: 201 LRQRKN---NVDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLNTLLHVLV 371
           L + K+   +VD + F VL+ AY   GM EKAVE+F  M +EF C+PD+   N +L V++
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRM-KEFDCRPDVFTYNVILRVMM 173

Query: 372 -SSGGIELANVVYRERMLK 425
                  LA  VY E MLK
Sbjct: 174 REEVFFMLAFAVYNE-MLK 191


>ref|XP_006389878.1| hypothetical protein EUTSA_v10018150mg [Eutrema salsugineum]
           gi|557086312|gb|ESQ27164.1| hypothetical protein
           EUTSA_v10018150mg [Eutrema salsugineum]
          Length = 781

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 4/139 (2%)
 Frame = +3

Query: 21  FVSSRAVIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQTFETAWEV 200
           F+S + +   +KD + +    F  F+W++++  LR     R  VI+ L +    +  W+ 
Sbjct: 59  FLSQKIITSVIKD-QVNRQLGFRFFIWASRRERLRSRESFR-LVINILSEENGCDLYWQT 116

Query: 201 LRQRKN---NVDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLNTLLHVLV 371
           L + K+   +VD + F VL+ AY   GM EKAVE+F  M +EF C+PD+   N +L V++
Sbjct: 117 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRM-KEFDCRPDVFTYNVILQVMM 175

Query: 372 -SSGGIELANVVYRERMLK 425
                  LA  VY E MLK
Sbjct: 176 REEVFFMLAFAVYNE-MLK 193


>ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335093|gb|EFH65511.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 780

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
 Frame = +3

Query: 21  FVSSRAVIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQTFETAWEV 200
           F+S   +   +K+ E +    F  F+W++++  LR        VID L ++   +  W+ 
Sbjct: 57  FLSKNIITSVIKE-EVNRQLGFRFFIWASRRERLRSGESF-GLVIDMLSEDNGCDLYWQT 114

Query: 201 LRQRKN---NVDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLNTLLHVLV 371
           L + K+   +VD + F VL+ AY   G+ EKAVE+F  M +EF C+PD+   N +L +++
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRM-KEFDCRPDVFTYNVILRIMM 173

Query: 372 SSG-GIELANVVYRERMLK 425
                  LA  VY E MLK
Sbjct: 174 REDVFFMLAFAVYNE-MLK 191


>ref|XP_004295543.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g79540-like [Fragaria vesca subsp. vesca]
          Length = 768

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
 Frame = +3

Query: 39  VIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTL-KKNQTFETAWEVLRQRK 215
           +I  ++   A+   AF +F+W+T++S +   +     ++D L K ++ F+  W  +++ +
Sbjct: 48  LISLIQQHHANPQLAFRVFIWATQRSKVCTRT-CHSAIVDMLVKDDKRFDIYWSTMQELR 106

Query: 216 N---NVDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLNTLLHVLVSSGGI 386
           +    + C  F VL++ Y+  G  EKAVE F  M EEF CKPD+   N +L+V+V     
Sbjct: 107 DCGVGIGCGAFSVLIRGYERLGNAEKAVEAFVKM-EEFDCKPDVYTYNAVLYVMVRKEVF 165

Query: 387 ELANVVYRERMLK 425
            LA  VY + MLK
Sbjct: 166 LLALAVYNQ-MLK 177


>gb|EOY31969.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 800

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
 Frame = +3

Query: 15  LGFVSSRAVIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQTFETAW 194
           L F+S   V   ++D + +    F  F+W+ ++  LR ++  +  V   L+K+  F+  W
Sbjct: 59  LPFLSPDIVTSIIQD-QPNPQLGFRFFIWAMQRKRLRSSASDKLVVDMLLRKDNGFDMYW 117

Query: 195 EVLRQRKNNVDCWV---FYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLNTLLHV 365
           + L + K      V   F VL+  Y   G+ EKAVE F  M++ F CKPD+   NT+L+V
Sbjct: 118 QTLEEIKKCGALIVSDAFKVLISGYSKLGLDEKAVECFGKMKD-FDCKPDVFTYNTILYV 176

Query: 366 LVSSGGIELANVVYRERMLKD 428
           +V    + LA  VY + MLK+
Sbjct: 177 MVRRKVLLLALAVYNQ-MLKN 196


>ref|XP_002307458.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550339385|gb|EEE94454.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 478

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
 Frame = +3

Query: 6   LDKLGF-VSSRAVIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQTF 182
           LD+ G  VS + V   LK  E     A+  F W+ K+ H  H+     TVID+L K + +
Sbjct: 51  LDQSGVRVSEQIVDDVLKKFENAGMVAYRFFEWAEKQRHYNHSVKAFHTVIDSLAKIRQY 110

Query: 183 ETAWEVLR--QRKNNVDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLNTL 356
           +  W+V++  + K  V+   F ++M+ Y  A  +E+AV TF++M +++   P++   N L
Sbjct: 111 QLMWDVVKVMKSKRMVNVETFCIIMRKYARAQKVEEAVYTFNIM-DKYDVPPNLAAFNGL 169

Query: 357 LHVLVSSGGIELANVVY---RERMLKD 428
           L  L  S  +  A  ++   ++R + D
Sbjct: 170 LSALCKSKNVRKAQEIFDSIKDRFVPD 196


>ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
           gi|449503560|ref|XP_004162063.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
          Length = 615

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
 Frame = +3

Query: 6   LDKLGFVSSRAVIKALKDVEADAATAF--GLFLWSTKKSHLRHASDLRDTVIDTLKKNQT 179
           LD+ G V S ++++A+ D   D++  F   LFLW+ KKS  R ++ L + +I+ L K++ 
Sbjct: 111 LDRTGIVPSSSLLEAVFD-HFDSSPKFLHSLFLWAAKKSGFRPSAALFNRLINVLAKSRE 169

Query: 180 FETAWEVLRQRKNN------VDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDII 341
           F++AW ++  R         V   VF +L++ Y  AGM++ A+ T+     EF+C  + I
Sbjct: 170 FDSAWSLITSRLRGGEESFLVSVEVFVILIRRYARAGMVQPAIRTY-----EFACNLETI 224

Query: 342 -------VLNTLLHVLVSSGGIELANVVYRER 416
                  +   LL  L   G + +A+  +  +
Sbjct: 225 SGTGSEGLFEILLDSLCKEGHVRVASEYFNRK 256


>gb|EMJ22798.1| hypothetical protein PRUPE_ppa026817mg, partial [Prunus persica]
          Length = 543

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 36/130 (27%), Positives = 69/130 (53%)
 Frame = +3

Query: 24  VSSRAVIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQTFETAWEVL 203
           +S+  V + LK    +   AFG F+W+  ++  RH  +  ++++D L K++ FE  WE++
Sbjct: 138 LSNSLVERVLKRFSNEWVPAFGFFIWAKAQTGYRHPPEAYNSMVDILGKSENFELMWEMV 197

Query: 204 RQRKNNVDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLNTLLHVLVSSGG 383
            +           ++M+    AG  ++A++ F  + E F  + D++ LNTL+  LV    
Sbjct: 198 EE-----------MVMRRLARAGRYKEAIDAFRGI-ERFGVRRDVLSLNTLMGALVKERS 245

Query: 384 IELANVVYRE 413
           +E A+ V+ E
Sbjct: 246 VEHAHEVFLE 255


>gb|EMT10479.1| hypothetical protein F775_13853 [Aegilops tauschii]
          Length = 715

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
 Frame = +3

Query: 33  RAVIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQTFETAWEVLR-- 206
           RAV++A    + DA  AF  F W+ ++   RHA ++ D ++  L + +  + A  V+R  
Sbjct: 90  RAVLRA--QAQTDARAAFEFFRWADRQWRYRHAPEVFDEMLSLLSRTRLHDPARRVMRLM 147

Query: 207 -QRKNNVDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLNTLLHVLVSSGG 383
            +R+       F  LM +Y  AG +  A+    LM+++  C PDI + N  ++VLV +G 
Sbjct: 148 MRRRMRRGTQQFAHLMLSYSRAGKLRSAMRVLQLMQKD-GCAPDISICNVAVNVLVFAGR 206

Query: 384 IELANVVYRERM 419
           I+ A + + +RM
Sbjct: 207 IDKA-LEFSDRM 217


>gb|EOY05751.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 554

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
 Frame = +3

Query: 24  VSSRAVIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQTFETAWEV- 200
           VS+ +V + LK       +A+G+F+W+ K+S  RH  +L D+++D L K + F+   ++ 
Sbjct: 129 VSNVSVDQLLKRFYHCWISAYGVFIWAKKQSGYRHTPELYDSMVDILGKAKKFDLVLDLV 188

Query: 201 --LRQRKNNVDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLNTLLHVLVS 374
             + Q K  +       +++    AG   +A+E F  + EE+    D++ LN LL  LV 
Sbjct: 189 NEMNQLKGYIRLNTMVKVIRRLAKAGRFSEAIEAFRRL-EEYGIGKDVVALNGLLDALVK 247

Query: 375 SGGIELANVVYRE 413
             G+E A  V+ E
Sbjct: 248 GDGVEHAYEVFVE 260


>ref|XP_006492928.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Citrus sinensis]
          Length = 869

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
 Frame = +3

Query: 15  LGFVSSRAVIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQTFETAW 194
           L F+S   V   +   + +    F  F+W+ K+  LR  +     VI  L K   F+  W
Sbjct: 128 LPFLSKTTVTSVIMKTK-NPQVGFRFFIWAAKRKRLRSFAS-NSAVIRMLLKPNGFDLYW 185

Query: 195 EVLRQRKN---NVDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLNTLLHV 365
           + L + K+   +V   VF+VL+  Y   G  EKA+E+F  M +EF C+PD+ + N +L++
Sbjct: 186 QTLDELKSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYMYNAVLNI 244

Query: 366 LVSSGGIELANVVYRE 413
           +       LA  VY E
Sbjct: 245 VFRKQLFLLALAVYYE 260


>ref|XP_006421323.1| hypothetical protein CICLE_v10004347mg [Citrus clementina]
           gi|557523196|gb|ESR34563.1| hypothetical protein
           CICLE_v10004347mg [Citrus clementina]
          Length = 801

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
 Frame = +3

Query: 15  LGFVSSRAVIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQTFETAW 194
           L F+S   V   +   + +    F  F+W+ K+  LR  +     VI  L K   F+  W
Sbjct: 60  LPFLSKTTVTSVIMKTK-NPQVGFRFFIWAAKRKRLRSFAS-NSAVIRMLLKPNGFDLYW 117

Query: 195 EVLRQRKN---NVDCWVFYVLMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLNTLLHV 365
           + L + K+   +V   VF+VL+  Y   G  EKA+E+F  M +EF C+PD+ + N +L++
Sbjct: 118 QTLDELKSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYMYNAVLNI 176

Query: 366 LVSSGGIELANVVYRE 413
           +       LA  VY E
Sbjct: 177 VFRKQLFLLALAVYYE 192


>ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g22670, mitochondrial; Flags: Precursor
           gi|9279685|dbj|BAB01242.1| unnamed protein product
           [Arabidopsis thaliana] gi|332643142|gb|AEE76663.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 562

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
 Frame = +3

Query: 24  VSSRAVIKALKDVEADAATAFGLFLWSTKKSHLRHASDLRDTVIDTLKKNQTFETAWEVL 203
           V+   V++ L+        A+G F+W+  ++   H+    + ++D L K + F+  WE++
Sbjct: 130 VTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELV 189

Query: 204 RQRKNNVDCWVFYV-----LMKAYKGAGMMEKAVETFDLMEEEFSCKPDIIVLNTLLHVL 368
            +   N +  +  +     +M+    +G   KAV+ F  ME+ +  K D I +N+L+  L
Sbjct: 190 NEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDAL 249

Query: 369 VSSGGIELANVVY 407
           V    IE A+ V+
Sbjct: 250 VKENSIEHAHEVF 262