BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00029886
         (544 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32614.3| unnamed protein product [Vitis vinifera]              196   2e-48
ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containi...   196   2e-48
ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutr...   193   2e-47
ref|XP_004306228.1| PREDICTED: pentatricopeptide repeat-containi...   193   2e-47
ref|XP_006843220.1| hypothetical protein AMTR_s00080p00039920 [A...   193   2e-47
gb|EPS62297.1| hypothetical protein M569_12494, partial [Genlise...   193   2e-47
gb|EMJ07627.1| hypothetical protein PRUPE_ppa001926mg [Prunus pe...   191   7e-47
ref|XP_002322855.2| hypothetical protein POPTR_0016s08650g [Popu...   191   9e-47
ref|XP_002456190.1| hypothetical protein SORBIDRAFT_03g031900 [S...   191   9e-47
ref|XP_001770673.1| predicted protein [Physcomitrella patens] gi...   191   9e-47
gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily p...   191   1e-46
ref|XP_006361774.1| PREDICTED: pentatricopeptide repeat-containi...   190   2e-46
ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata] gi...   189   4e-46
ref|XP_006296758.1| hypothetical protein CARUB_v10015405mg [Caps...   189   5e-46
ref|NP_187576.1| RNA binding protein HCF152 [Arabidopsis thalian...   188   6e-46
dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]           188   6e-46
dbj|BAJ98927.1| predicted protein [Hordeum vulgare subsp. vulgare]    187   2e-45
gb|EXC16278.1| hypothetical protein L484_024452 [Morus notabilis]     185   5e-45
ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containi...   185   5e-45
ref|XP_006428878.1| hypothetical protein CICLE_v10011148mg [Citr...   185   7e-45

>emb|CBI32614.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  196 bits (499), Expect = 2e-48
 Identities = 96/181 (53%), Positives = 130/181 (71%), Gaps = 1/181 (0%)
 Frame = -3

Query: 542 AMQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYC 363
           AM+   D   +PDH+TYTT +SA V+   ++ A  +L EM   G+ AN +TYN LL GYC
Sbjct: 386 AMRHQDDSTSQPDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPANRVTYNILLKGYC 445

Query: 362 VLQKMKKAKQLIEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSE 186
              ++ KAK+L+ EM  D GIVPD+V+YNTLI+GCI   D+  AL YF+ M+   + P++
Sbjct: 446 EQLQIDKAKELVREMVDDEGIVPDVVSYNTLIDGCILVDDSAGALAYFNEMRARGIAPTK 505

Query: 185 ITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMK 6
           I+YT LMKAFA +GQPK A KVFDEMLRDP++KVDL AWNML+E++C  G+VE AK  ++
Sbjct: 506 ISYTTLMKAFALSGQPKLANKVFDEMLRDPRVKVDLVAWNMLVEAHCRLGLVEEAKKTVQ 565

Query: 5   Q 3
           +
Sbjct: 566 R 566



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 23/192 (11%)
 Frame = -3

Query: 509 PDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQL 330
           PD +TY   I    R+D  +    +L+ +  +G+     T ++L+  Y     ++ A++L
Sbjct: 273 PDVLTYNVMIKLCARVDRKDLLVFVLERILDKGIQLCMTTLHSLVAAYVGFGDLETAEKL 332

Query: 329 IEEMRDA----------------GIVPDIVTYNTLINGCIE---AMDNVSALEYFDGMKK 207
           ++ MR+                    PD   Y TL+ G ++     D V  LE       
Sbjct: 333 VQAMREGRQDLCKILRDVNSENPAYAPDSRIYTTLMKGYMKEGRVTDTVRMLEAMRHQDD 392

Query: 206 AAVRPSEITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPA----WNMLLESYCMA 39
           +  +P  +TYT ++ A  +AG    A +V  EM R     + +PA    +N+LL+ YC  
Sbjct: 393 STSQPDHVTYTTVVSALVKAGSMDRARQVLAEMTR-----IGVPANRVTYNILLKGYCEQ 447

Query: 38  GMVETAKLVMKQ 3
             ++ AK ++++
Sbjct: 448 LQIDKAKELVRE 459



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
 Frame = -3

Query: 527 RDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKM 348
           RDP V+ D + +   + A  R+ ++ EA   +Q M   G   N  TY +L NG  + +K 
Sbjct: 533 RDPRVKVDLVAWNMLVEAHCRLGLVEEAKKTVQRMRENGFYPNVATYGSLANGIALARKP 592

Query: 347 KKAKQLIEEMRDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSEITYT-V 171
            +A  L  E+++    PD    +TL + C+ A     ALE    M++  + P++  YT +
Sbjct: 593 GEALLLWNEVKER--CPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKSKYTRI 650

Query: 170 LMKAFARAGQPKNATK 123
            ++  +R    K+A+K
Sbjct: 651 YVEMHSRMFTSKHASK 666


>ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Vitis vinifera]
          Length = 749

 Score =  196 bits (499), Expect = 2e-48
 Identities = 96/181 (53%), Positives = 130/181 (71%), Gaps = 1/181 (0%)
 Frame = -3

Query: 542 AMQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYC 363
           AM+   D   +PDH+TYTT +SA V+   ++ A  +L EM   G+ AN +TYN LL GYC
Sbjct: 406 AMRHQDDSTSQPDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPANRVTYNILLKGYC 465

Query: 362 VLQKMKKAKQLIEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSE 186
              ++ KAK+L+ EM  D GIVPD+V+YNTLI+GCI   D+  AL YF+ M+   + P++
Sbjct: 466 EQLQIDKAKELVREMVDDEGIVPDVVSYNTLIDGCILVDDSAGALAYFNEMRARGIAPTK 525

Query: 185 ITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMK 6
           I+YT LMKAFA +GQPK A KVFDEMLRDP++KVDL AWNML+E++C  G+VE AK  ++
Sbjct: 526 ISYTTLMKAFALSGQPKLANKVFDEMLRDPRVKVDLVAWNMLVEAHCRLGLVEEAKKTVQ 585

Query: 5   Q 3
           +
Sbjct: 586 R 586



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
 Frame = -3

Query: 527  RDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKM 348
            RDP V+ D + +   + A  R+ ++ EA   +Q M   G   N  TY +L NG  + +K 
Sbjct: 553  RDPRVKVDLVAWNMLVEAHCRLGLVEEAKKTVQRMRENGFYPNVATYGSLANGIALARKP 612

Query: 347  KKAKQLIEEMRDAGIV---------------PDIVTYNTLINGCIEAMDNVSALEYFDGM 213
             +A  L  E+++  +V               PD    +TL + C+ A     ALE    M
Sbjct: 613  GEALLLWNEVKERCVVKEEGEISKSSPPPLKPDEGLLDTLADICVRAAFFRKALEIVACM 672

Query: 212  KKAAVRPSEITYT-VLMKAFARAGQPKNATK 123
            ++  + P++  YT + ++  +R    K+A+K
Sbjct: 673  EENGIPPNKSKYTRIYVEMHSRMFTSKHASK 703


>ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutrema salsugineum]
           gi|557108800|gb|ESQ49107.1| hypothetical protein
           EUTSA_v10020113mg [Eutrema salsugineum]
          Length = 777

 Score =  193 bits (491), Expect = 2e-47
 Identities = 92/181 (50%), Positives = 129/181 (71%), Gaps = 1/181 (0%)
 Frame = -3

Query: 542 AMQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYC 363
           AM++  D    PD +TYTT +SAFV+  +++ A  +L EMA  G+ AN +TYN LL GYC
Sbjct: 438 AMRRQDDSKSHPDEVTYTTVVSAFVKAGLMDRARQVLGEMARMGVPANRITYNVLLKGYC 497

Query: 362 VLQKMKKAKQLIEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSE 186
              ++ KA+ L+ EM  DAGI PD+V+YN +I+GCI   D+  AL +F+ M+   + P++
Sbjct: 498 KQLQIDKAEDLLREMAEDAGIEPDVVSYNIIIDGCILIDDSAGALSFFNEMRTKGIAPTK 557

Query: 185 ITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMK 6
           I+YT LMKAFA +GQPK A +VFDEM+RDP++KVDL AWNML+E YC  G++E AK V+ 
Sbjct: 558 ISYTTLMKAFAMSGQPKLANRVFDEMMRDPRVKVDLIAWNMLVEGYCRLGLIEDAKRVVS 617

Query: 5   Q 3
           +
Sbjct: 618 R 618


>ref|XP_004306228.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 743

 Score =  193 bits (491), Expect = 2e-47
 Identities = 91/181 (50%), Positives = 129/181 (71%), Gaps = 1/181 (0%)
 Frame = -3

Query: 542 AMQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYC 363
           A++   D   +PDH+TYTT +SAFV+   ++ A  +L EM   G+ AN +TYN LL GYC
Sbjct: 405 ALRHQDDSSSQPDHVTYTTVVSAFVKAGSMDRARRVLAEMTRVGVPANRITYNILLKGYC 464

Query: 362 VLQKMKKAKQLIEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSE 186
              ++ +AK+L+ EM  DAGI PD+V+YN LI+GCI+  D+  AL +F+ M+   + P++
Sbjct: 465 QQLQIDQAKELVREMTEDAGIEPDVVSYNILIDGCIQVDDSARALAFFNEMRAKGIAPTK 524

Query: 185 ITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMK 6
           I+YT LMKAFA +GQPK A KVFDEML DP++K DL AWNML+E YC  G+VE +K +++
Sbjct: 525 ISYTTLMKAFALSGQPKLANKVFDEMLNDPRVKADLVAWNMLVEGYCRLGLVEESKKIIQ 584

Query: 5   Q 3
           +
Sbjct: 585 R 585



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
 Frame = -3

Query: 404 ANHLTYNTLLNGYCVLQKMKKAKQLIEEMR---DAGIVPDIVTYNTLINGCIEAMDNVSA 234
           AN   Y TL+ GY    ++    +++E +R   D+   PD VTY T+++  ++A     A
Sbjct: 378 ANSRIYTTLMKGYMNAGRVIDTVRMLEALRHQDDSSSQPDHVTYTTVVSAFVKAGSMDRA 437

Query: 233 LEYFDGMKKAAVRPSEITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLE 54
                 M +  V  + ITY +L+K + +  Q   A ++  EM  D  I+ D+ ++N+L++
Sbjct: 438 RRVLAEMTRVGVPANRITYNILLKGYCQQLQIDQAKELVREMTEDAGIEPDVVSYNILID 497



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
 Frame = -3

Query: 533 QSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQG-LNANHLTYNTLLNGYCVL 357
           + R   + P  I+YTT + AF        A+ +  EM     + A+ + +N L+ GYC L
Sbjct: 514 EMRAKGIAPTKISYTTLMKAFALSGQPKLANKVFDEMLNDPRVKADLVAWNMLVEGYCRL 573

Query: 356 QKMKKAKQLIEEMRDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSE 186
             ++++K++I+ M++ G  PD+ TY +L NG   A     AL  ++ +K       E
Sbjct: 574 GLVEESKKIIQRMKEHGFHPDVATYGSLANGIALARKPGEALLLWNEVKDRCTAKKE 630


>ref|XP_006843220.1| hypothetical protein AMTR_s00080p00039920 [Amborella trichopoda]
           gi|548845504|gb|ERN04895.1| hypothetical protein
           AMTR_s00080p00039920 [Amborella trichopoda]
          Length = 718

 Score =  193 bits (490), Expect = 2e-47
 Identities = 91/177 (51%), Positives = 132/177 (74%)
 Frame = -3

Query: 539 MQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCV 360
           M++ RD   +PD +TYTT ++A VR  +++ A A+L EMA + + AN +TYN LL GYC 
Sbjct: 384 MEKQRDSS-QPDEVTYTTVVTALVREGLMDRARAMLSEMASRKVPANRVTYNVLLKGYCR 442

Query: 359 LQKMKKAKQLIEEMRDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSEIT 180
           L +MKKA+ L+ +M++AGI  D+V+YN LI+GCI   D+  AL YF+ M+   + PS+I+
Sbjct: 443 LVQMKKAEALVGDMKEAGIELDVVSYNILIDGCIVIDDSAKALSYFNEMRSKGIAPSKIS 502

Query: 179 YTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVM 9
           YT LMKAFA +G+PK A+KVFDEML+DP+++VD+ AWNMLL++YC  G+ E AK ++
Sbjct: 503 YTTLMKAFASSGKPKLASKVFDEMLKDPRVEVDMVAWNMLLDAYCRLGLFEEAKSIV 559


>gb|EPS62297.1| hypothetical protein M569_12494, partial [Genlisea aurea]
          Length = 675

 Score =  193 bits (490), Expect = 2e-47
 Identities = 97/180 (53%), Positives = 128/180 (71%), Gaps = 1/180 (0%)
 Frame = -3

Query: 542 AMQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYC 363
           AM+   D    PDH+ YTT ISAFV+   +++A  +L EMA + + AN +TYN LL GYC
Sbjct: 334 AMRYEEDESSHPDHVAYTTVISAFVKARSMDKARQVLAEMAKRDVPANLVTYNILLKGYC 393

Query: 362 VLQKMKKAKQLIEEMRD-AGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSE 186
              +M KA+ LI EM + AGI PD V+YNTLI+GCI + D+  AL YF+ M+   + P++
Sbjct: 394 QQLQMDKAEDLIREMINRAGIEPDAVSYNTLIDGCILSDDSAGALAYFNEMRTRGIAPTK 453

Query: 185 ITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMK 6
           ++YT LMKAFA +GQPK A KVFDEML+DP++K DL AWNML+E YC  GMVE AK V++
Sbjct: 454 VSYTTLMKAFASSGQPKLANKVFDEMLKDPRVKPDLIAWNMLVEGYCKLGMVEEAKTVIQ 513



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 22/157 (14%)
 Frame = -3

Query: 527 RDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKM 348
           +DP V+PD I +   +  + ++ M+ EA  ++Q M   G++ N  TY +L NG  V +K 
Sbjct: 481 KDPRVKPDLIAWNMLVEGYCKLGMVEEAKTVIQAMKDYGVHPNVATYGSLANGISVARKP 540

Query: 347 KKAKQLIEEMRD-AGIV--------------------PDIVTYNTLINGCIEAMDNVSAL 231
            +A  L  E+++  GI+                    PD    +TL + C+ A     AL
Sbjct: 541 GEALLLWNEIKERCGIISIEESSSSSSSSSSSLPPLKPDEGLLDTLADICVRAAFFRKAL 600

Query: 230 EYFDGMKKAAVRPSEITY-TVLMKAFARAGQPKNATK 123
           E    M++  + P++I Y  + ++  +R    K+A++
Sbjct: 601 EIVACMEEHGIPPNKIKYKRIYVEMHSRMFTSKHASR 637


>gb|EMJ07627.1| hypothetical protein PRUPE_ppa001926mg [Prunus persica]
          Length = 740

 Score =  191 bits (486), Expect = 7e-47
 Identities = 93/181 (51%), Positives = 128/181 (70%), Gaps = 1/181 (0%)
 Frame = -3

Query: 542 AMQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYC 363
           A++   D    PDH+TYTT ISAFV+   ++ A  +L EM   G+ AN +TYN LL GYC
Sbjct: 402 ALRHQDDSSSHPDHVTYTTVISAFVKAGSMDRARRVLAEMTRVGVPANRITYNILLKGYC 461

Query: 362 VLQKMKKAKQLIEEMRD-AGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSE 186
              ++ +AK+L+ EM D AGI PD+V+YN LI+GCI   D+  AL +F+ M+   + P++
Sbjct: 462 QQLQIDQAKELLREMADDAGIEPDVVSYNILIDGCILVDDSAGALGFFNEMRTRGLAPTK 521

Query: 185 ITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMK 6
           I+YT LMKAFA +GQPK A KVFDEML DP++K DL AWNML+E+YC  G+VE AK +++
Sbjct: 522 ISYTTLMKAFALSGQPKLANKVFDEMLNDPRVKADLVAWNMLVEAYCRMGLVEEAKKIIQ 581

Query: 5   Q 3
           +
Sbjct: 582 R 582



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
 Frame = -3

Query: 401 NHLTYNTLLNGYCVLQKMKKAKQLIEEMR---DAGIVPDIVTYNTLINGCIEAMDNVSAL 231
           N   Y TL+ GY  + ++    +++E +R   D+   PD VTY T+I+  ++A     A 
Sbjct: 376 NSRIYTTLMKGYMNVGRVTDTVRMLEALRHQDDSSSHPDHVTYTTVISAFVKAGSMDRAR 435

Query: 230 EYFDGMKKAAVRPSEITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLE 54
                M +  V  + ITY +L+K + +  Q   A ++  EM  D  I+ D+ ++N+L++
Sbjct: 436 RVLAEMTRVGVPANRITYNILLKGYCQQLQIDQAKELLREMADDAGIEPDVVSYNILID 494



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
 Frame = -3

Query: 533 QSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQG-LNANHLTYNTLLNGYCVL 357
           + R   + P  I+YTT + AF        A+ +  EM     + A+ + +N L+  YC +
Sbjct: 511 EMRTRGLAPTKISYTTLMKAFALSGQPKLANKVFDEMLNDPRVKADLVAWNMLVEAYCRM 570

Query: 356 QKMKKAKQLIEEMRDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKK 207
             +++AK++I+ ++D G  PD+ TY +L NG   A     AL  ++ +K+
Sbjct: 571 GLVEEAKKIIQRIKDNGFHPDVATYGSLANGIALARKPGEALLLWNEVKE 620


>ref|XP_002322855.2| hypothetical protein POPTR_0016s08650g [Populus trichocarpa]
           gi|550321129|gb|EEF04616.2| hypothetical protein
           POPTR_0016s08650g [Populus trichocarpa]
          Length = 724

 Score =  191 bits (485), Expect = 9e-47
 Identities = 95/181 (52%), Positives = 128/181 (70%), Gaps = 1/181 (0%)
 Frame = -3

Query: 542 AMQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYC 363
           AM+   D   +PDHITYTT ISA V+   ++ A  +L EM   G+ AN +TYN LL GYC
Sbjct: 385 AMRCQDDSKGQPDHITYTTVISALVKAGSMDPARQVLAEMTRIGVPANRITYNILLKGYC 444

Query: 362 VLQKMKKAKQLIEEMRD-AGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSE 186
              ++ KAK+L++EM D   I PD+V+YNTLI+GCI   D+  AL +F+ M+   + P++
Sbjct: 445 QQLQIDKAKELLKEMADDVNIEPDVVSYNTLIDGCILVDDSAGALAFFNEMRTKGIMPTK 504

Query: 185 ITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMK 6
           I+YT LMKAFA +GQPK A KVFDEML+DP++K DL AWNMLLE YC  G+V+ AK V++
Sbjct: 505 ISYTTLMKAFALSGQPKLANKVFDEMLKDPRVKADLVAWNMLLEGYCRLGLVDEAKTVIQ 564

Query: 5   Q 3
           +
Sbjct: 565 R 565



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = -3

Query: 533 QSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQG-LNANHLTYNTLLNGYCVL 357
           + R   + P  I+YTT + AF        A+ +  EM     + A+ + +N LL GYC L
Sbjct: 494 EMRTKGIMPTKISYTTLMKAFALSGQPKLANKVFDEMLKDPRVKADLVAWNMLLEGYCRL 553

Query: 356 QKMKKAKQLIEEMRDAGIVPDIVTYNTLING 264
             + +AK +I+ M++ G  PD+ TY +L NG
Sbjct: 554 GLVDEAKTVIQRMKENGFHPDVATYGSLANG 584


>ref|XP_002456190.1| hypothetical protein SORBIDRAFT_03g031900 [Sorghum bicolor]
           gi|241928165|gb|EES01310.1| hypothetical protein
           SORBIDRAFT_03g031900 [Sorghum bicolor]
          Length = 731

 Score =  191 bits (485), Expect = 9e-47
 Identities = 94/174 (54%), Positives = 124/174 (71%), Gaps = 1/174 (0%)
 Frame = -3

Query: 521 PDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKK 342
           P  RPDH+TYTT +SA V    +  AHA+L EMA  G+ AN +TYN LL GYC   ++ K
Sbjct: 412 PASRPDHVTYTTVMSALVGAGDVARAHAVLDEMAADGVPANRVTYNVLLKGYCQQLQIGK 471

Query: 341 AKQLIEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSEITYTVLM 165
           A++L EEM  DAGI P +VTYNTL++GC+ + D+  AL +F+ M+   + PS ++YT LM
Sbjct: 472 ARELFEEMVTDAGIQPGVVTYNTLMDGCVLSDDSAGALAFFNEMRSRGIAPSTVSYTTLM 531

Query: 164 KAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMKQ 3
           KAFA +GQPK A KVF+EM RDP++ VD  AWNML+E YC  G VETAK V+++
Sbjct: 532 KAFAVSGQPKVAHKVFEEMERDPRVTVDRAAWNMLVEGYCRLGQVETAKQVVER 585



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
 Frame = -3

Query: 533 QSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQG-LNANHLTYNTLLNGYCVL 357
           + R   + P  ++YTT + AF        AH + +EM     +  +   +N L+ GYC L
Sbjct: 514 EMRSRGIAPSTVSYTTLMKAFAVSGQPKVAHKVFEEMERDPRVTVDRAAWNMLVEGYCRL 573

Query: 356 QKMKKAKQLIEEMRDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSE 186
            +++ AKQ++E M++ G+ PD+ TY +L  G   A     AL  ++ +K+  +  ++
Sbjct: 574 GQVETAKQVVERMKERGVQPDVATYGSLAKGVAMARKPGEALVLWNEVKERCLEEAD 630



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
 Frame = -3

Query: 524 DPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMK 345
           D  ++P  +TY T +   V  D    A A   EM  +G+  + ++Y TL+  + V  + K
Sbjct: 482 DAGIQPGVVTYNTLMDGCVLSDDSAGALAFFNEMRSRGIAPSTVSYTTLMKAFAVSGQPK 541

Query: 344 KAKQLIEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSEITYTVL 168
            A ++ EEM RD  +  D   +N L+ G        +A +  + MK+  V+P   TY  L
Sbjct: 542 VAHKVFEEMERDPRVTVDRAAWNMLVEGYCRLGQVETAKQVVERMKERGVQPDVATYGSL 601

Query: 167 MKAFARAGQPKNATKVFDEM 108
            K  A A +P  A  +++E+
Sbjct: 602 AKGVAMARKPGEALVLWNEV 621


>ref|XP_001770673.1| predicted protein [Physcomitrella patens]
           gi|162678034|gb|EDQ64497.1| predicted protein
           [Physcomitrella patens]
          Length = 717

 Score =  191 bits (485), Expect = 9e-47
 Identities = 89/180 (49%), Positives = 125/180 (69%)
 Frame = -3

Query: 542 AMQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYC 363
           AMQ  +DP   P+ ++YTTAIS+ VR+ +++EA  +LQEM    +  N +TYN LL GYC
Sbjct: 394 AMQMDKDPRSSPNEVSYTTAISSCVRLGLMDEATVVLQEMLKHNIPVNVITYNILLKGYC 453

Query: 362 VLQKMKKAKQLIEEMRDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSEI 183
             +K++KA  ++++M +AG+  D+V+YNTLINGCIE  DN +AL+YF  M++  + PS +
Sbjct: 454 SARKLQKAHSVVKDMEEAGVALDVVSYNTLINGCIETGDNAAALDYFKKMRETGISPSAV 513

Query: 182 TYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMKQ 3
           +YT LMKAF R GQPK    VF+EM  DP++K D  AWN+LL+SYC  G V  AK +  Q
Sbjct: 514 SYTTLMKAFGRNGQPKQVHLVFEEMRNDPRMKTDAVAWNVLLDSYCRNGRVADAKRMFLQ 573



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 20/198 (10%)
 Frame = -3

Query: 539 MQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCV 360
           M   R   ++PD IT+ T I  + + D      +L  EM    +  +  T N+L+ GY  
Sbjct: 270 MNSMRRCGLQPDSITFNTLIKLYAKCDQRKLLKSLPDEMVENKVMPDESTVNSLIAGYVG 329

Query: 359 LQKMKKAKQLIEEMRD-----------------AGIVPDIVTYNTLINGCIEAMDNVSAL 231
           L  +++A+ L+  ++D                 A + PD+ TY TL+ G ++      A+
Sbjct: 330 LGDLREAEALLRRLQDKSEQGNDSKTKSKSWWGAHLRPDVRTYTTLMKGYVQKGRRSDAM 389

Query: 230 EYFDGM---KKAAVRPSEITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNML 60
                M   K     P+E++YT  + +  R G    AT V  EML+   I V++  +N+L
Sbjct: 390 RTLLAMQMDKDPRSSPNEVSYTTAISSCVRLGLMDEATVVLQEMLKH-NIPVNVITYNIL 448

Query: 59  LESYCMAGMVETAKLVMK 6
           L+ YC A  ++ A  V+K
Sbjct: 449 LKGYCSARKLQKAHSVVK 466



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
 Frame = -3

Query: 512 RPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQ 333
           RPD   +  A++A   +    +   L+  M   GL  + +T+NTL+  Y    + K  K 
Sbjct: 244 RPDTGAFNAALNACATLGFAAKGEDLMNSMRRCGLQPDSITFNTLIKLYAKCDQRKLLKS 303

Query: 332 LIEEMRDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKK-----------------A 204
           L +EM +  ++PD  T N+LI G +   D   A      ++                  A
Sbjct: 304 LPDEMVENKVMPDESTVNSLIAGYVGLGDLREAEALLRRLQDKSEQGNDSKTKSKSWWGA 363

Query: 203 AVRPSEITYTVLMKAFARAGQPKNA--TKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMV 30
            +RP   TYT LMK + + G+  +A  T +  +M +DP+   +  ++   + S    G++
Sbjct: 364 HLRPDVRTYTTLMKGYVQKGRRSDAMRTLLAMQMDKDPRSSPNEVSYTTAISSCVRLGLM 423

Query: 29  ETAKLVMKQ 3
           + A +V+++
Sbjct: 424 DEATVVLQE 432


>gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 758

 Score =  191 bits (484), Expect = 1e-46
 Identities = 94/181 (51%), Positives = 129/181 (71%), Gaps = 1/181 (0%)
 Frame = -3

Query: 542 AMQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYC 363
           AM+   D    PDH+TYTT +SAFV+  +++ A  +L EM   G+ AN +TYN LL GYC
Sbjct: 420 AMRHQGDKASHPDHVTYTTVVSAFVKAGLMDRAREVLAEMTRIGVPANWITYNILLKGYC 479

Query: 362 VLQKMKKAKQLIEEMRD-AGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSE 186
              ++ KAK+L+ EM D A I PD+V+YN LI+GCI   D+  AL +F+ M++  + P++
Sbjct: 480 QQLQIDKAKELLREMADDAEIKPDVVSYNILIDGCILIDDSAGALAFFNEMRERGIAPTK 539

Query: 185 ITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMK 6
           I+YT LMKAFA +GQPK A KVFDEMLRDP++KVDL AWNML+E Y   G+VE AK +++
Sbjct: 540 ISYTTLMKAFALSGQPKLANKVFDEMLRDPRVKVDLVAWNMLVEGYSRLGLVEEAKKIIQ 599

Query: 5   Q 3
           +
Sbjct: 600 R 600


>ref|XP_006361774.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Solanum tuberosum]
          Length = 738

 Score =  190 bits (482), Expect = 2e-46
 Identities = 91/180 (50%), Positives = 127/180 (70%)
 Frame = -3

Query: 542 AMQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYC 363
           AM+   D +  PDH+TYTT ISAFV+  +++ A  +L EM   G+ AN +TYN L+ GYC
Sbjct: 397 AMRHLGDSESHPDHVTYTTVISAFVKQGLMDRAREVLAEMVRIGVPANRVTYNVLIKGYC 456

Query: 362 VLQKMKKAKQLIEEMRDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSEI 183
               +  A++LI+EM D GI PD+V+YNT+I+GCI   D   AL YF+ M+   + P+++
Sbjct: 457 QQLHIDMAEELIKEMIDTGIEPDVVSYNTIIDGCILVDDCAGALSYFNEMRARGIAPTKV 516

Query: 182 TYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMKQ 3
           +YT LMKAFA +GQ K A KVFDEML+DP++KVDL AWNML+++Y   G VE AK V+++
Sbjct: 517 SYTTLMKAFASSGQAKLANKVFDEMLKDPRVKVDLVAWNMLVDAYSKLGKVEEAKSVIER 576


>ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata]
           gi|297328472|gb|EFH58891.1| HCF152 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 772

 Score =  189 bits (480), Expect = 4e-46
 Identities = 89/181 (49%), Positives = 129/181 (71%), Gaps = 1/181 (0%)
 Frame = -3

Query: 542 AMQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYC 363
           AM++  D +  PD +TYTT +SAFV+  +++ A  +L EMA  G+ AN +TYN LL GYC
Sbjct: 433 AMRRQDDRNSHPDEVTYTTVVSAFVKAGLMDRARQVLAEMARMGVPANRITYNVLLKGYC 492

Query: 362 VLQKMKKAKQLIEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSE 186
              ++ +A+ L+ EM  DAGI PD+V+YN +I+GCI   D+  AL +F+ M+   + P++
Sbjct: 493 KQLQIDRAEDLLREMAEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTK 552

Query: 185 ITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMK 6
           I+YT LMKAFA +GQPK A +VFDEM+ DP++KVDL AWNML+E YC  G++E A+ V+ 
Sbjct: 553 ISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVS 612

Query: 5   Q 3
           +
Sbjct: 613 R 613


>ref|XP_006296758.1| hypothetical protein CARUB_v10015405mg [Capsella rubella]
           gi|482565467|gb|EOA29656.1| hypothetical protein
           CARUB_v10015405mg [Capsella rubella]
          Length = 781

 Score =  189 bits (479), Expect = 5e-46
 Identities = 88/181 (48%), Positives = 129/181 (71%), Gaps = 1/181 (0%)
 Frame = -3

Query: 542 AMQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYC 363
           AM++  D +  PD +TYTT +SAFV+  +++ A  +L EMA  G+ AN +TYN LL GYC
Sbjct: 442 AMRRQDDRNSHPDEVTYTTVVSAFVKAGLMDRARQVLAEMARMGVPANRITYNVLLKGYC 501

Query: 362 VLQKMKKAKQLIEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSE 186
              ++ +A+ L+ EM  DAG+ PD+V+YN +I+GCI   D+  AL +F+ M+   + P++
Sbjct: 502 KQLQIDRAEDLLREMAEDAGVEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTK 561

Query: 185 ITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMK 6
           I+YT LMKAFA +GQPK A +VFDEM+ DP++KVDL AWNML+E YC  G++E A+ V+ 
Sbjct: 562 ISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVS 621

Query: 5   Q 3
           +
Sbjct: 622 R 622


>ref|NP_187576.1| RNA binding protein HCF152 [Arabidopsis thaliana]
           gi|75204290|sp|Q9SF38.1|PP222_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g09650, chloroplastic; AltName: Full=Protein HIGH
           CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor
           gi|6682243|gb|AAF23295.1|AC016661_20 hypothetical
           protein [Arabidopsis thaliana]
           gi|332641272|gb|AEE74793.1| RNA binding protein HCF152
           [Arabidopsis thaliana]
          Length = 778

 Score =  188 bits (478), Expect = 6e-46
 Identities = 89/181 (49%), Positives = 128/181 (70%), Gaps = 1/181 (0%)
 Frame = -3

Query: 542 AMQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYC 363
           AM++  D +  PD +TYTT +SAFV   +++ A  +L EMA  G+ AN +TYN LL GYC
Sbjct: 439 AMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYC 498

Query: 362 VLQKMKKAKQLIEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSE 186
              ++ +A+ L+ EM  DAGI PD+V+YN +I+GCI   D+  AL +F+ M+   + P++
Sbjct: 499 KQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTK 558

Query: 185 ITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMK 6
           I+YT LMKAFA +GQPK A +VFDEM+ DP++KVDL AWNML+E YC  G++E A+ V+ 
Sbjct: 559 ISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVS 618

Query: 5   Q 3
           +
Sbjct: 619 R 619



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
 Frame = -3

Query: 533 QSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQG-LNANHLTYNTLLNGYCVL 357
           + R   + P  I+YTT + AF        A+ +  EM     +  + + +N L+ GYC L
Sbjct: 548 EMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRL 607

Query: 356 QKMKKAKQLIEEMRDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMK-KAAVRPSE 186
             ++ A++++  M++ G  P++ TY +L NG  +A     AL  +  +K + AV+  E
Sbjct: 608 GLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKE 665


>dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]
          Length = 778

 Score =  188 bits (478), Expect = 6e-46
 Identities = 89/181 (49%), Positives = 128/181 (70%), Gaps = 1/181 (0%)
 Frame = -3

Query: 542 AMQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYC 363
           AM++  D +  PD +TYTT +SAFV   +++ A  +L EMA  G+ AN +TYN LL GYC
Sbjct: 439 AMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYC 498

Query: 362 VLQKMKKAKQLIEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSE 186
              ++ +A+ L+ EM  DAGI PD+V+YN +I+GCI   D+  AL +F+ M+   + P++
Sbjct: 499 KQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTK 558

Query: 185 ITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMK 6
           I+YT LMKAFA +GQPK A +VFDEM+ DP++KVDL AWNML+E YC  G++E A+ V+ 
Sbjct: 559 ISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVS 618

Query: 5   Q 3
           +
Sbjct: 619 R 619



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
 Frame = -3

Query: 533 QSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQG-LNANHLTYNTLLNGYCVL 357
           + R   + P  I+YTT + AF        A+ +  EM     +  + + +N L+ GYC L
Sbjct: 548 EMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRL 607

Query: 356 QKMKKAKQLIEEMRDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMK-KAAVRPSE 186
             ++ A++++  M++ G  P++ TY +L NG  +A     AL  +  +K + AV+  E
Sbjct: 608 GLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKE 665


>dbj|BAJ98927.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 733

 Score =  187 bits (474), Expect = 2e-45
 Identities = 90/174 (51%), Positives = 121/174 (69%), Gaps = 1/174 (0%)
 Frame = -3

Query: 521 PDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKK 342
           P  RPDH+TYTT +S       +  AHA+L EMA  G+ A+ +TYN L+ GYC   +M +
Sbjct: 400 PASRPDHVTYTTVVSTLAAAGDMERAHAVLDEMARAGVPASRVTYNVLIKGYCQQLQMSR 459

Query: 341 AKQLIEEMR-DAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSEITYTVLM 165
           A++L+EEM  DAGI  D+VTYNTLI+GC+   D+  AL  F+ M+   V PS ++YT LM
Sbjct: 460 ARELLEEMTTDAGIEADVVTYNTLIDGCVLMDDSAGALALFNEMRARGVAPSTVSYTTLM 519

Query: 164 KAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMKQ 3
           KAFA +GQPK A  VF+EM +DP++ VD PAWNML+E YC  GM+ETAK  +++
Sbjct: 520 KAFAASGQPKVAHNVFEEMEKDPRVTVDRPAWNMLVEGYCQQGMLETAKQTVER 573



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
 Frame = -3

Query: 536 QQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVL 357
           + + D  +  D +TY T I   V MD    A AL  EM  +G+  + ++Y TL+  +   
Sbjct: 466 EMTTDAGIEADVVTYNTLIDGCVLMDDSAGALALFNEMRARGVAPSTVSYTTLMKAFAAS 525

Query: 356 QKMKKAKQLIEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSEIT 180
            + K A  + EEM +D  +  D   +N L+ G  +     +A +  + MK++ V+P   T
Sbjct: 526 GQPKVAHNVFEEMEKDPRVTVDRPAWNMLVEGYCQQGMLETAKQTVERMKESGVQPDVAT 585

Query: 179 YTVLMKAFARAGQPKNATKVFDEM 108
           Y  L K  A A +P  A  +++E+
Sbjct: 586 YGSLAKGIAVARKPGEALLLWNEV 609



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 11/149 (7%)
 Frame = -3

Query: 533 QSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQG-LNANHLTYNTLLNGYCVL 357
           + R   V P  ++YTT + AF        AH + +EM     +  +   +N L+ GYC  
Sbjct: 502 EMRARGVAPSTVSYTTLMKAFAASGQPKVAHNVFEEMEKDPRVTVDRPAWNMLVEGYCQQ 561

Query: 356 QKMKKAKQLIEEMRDAGIVPDIVTYNTLINGCIEAMDNVSAL----------EYFDGMKK 207
             ++ AKQ +E M+++G+ PD+ TY +L  G   A     AL          E   G  K
Sbjct: 562 GMLETAKQTVERMKESGVQPDVATYGSLAKGIAVARKPGEALLLWNEVKERCEAGSGNGK 621

Query: 206 AAVRPSEITYTVLMKAFARAGQPKNATKV 120
             +RP E     L     R    K A ++
Sbjct: 622 PGLRPDEELLDALADVCVRGAFFKKALEI 650


>gb|EXC16278.1| hypothetical protein L484_024452 [Morus notabilis]
          Length = 749

 Score =  185 bits (470), Expect = 5e-45
 Identities = 90/181 (49%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
 Frame = -3

Query: 542 AMQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYC 363
           AM+   D    PDH++YTT +SAFV    ++ A  +  EM    + AN +TYN LL GYC
Sbjct: 400 AMRHQEDSASHPDHVSYTTVVSAFVNSGSMDRARQVFAEMTRIRVPANRITYNILLKGYC 459

Query: 362 VLQKMKKAKQLIEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSE 186
              ++ KAK+L++EM  DAGI PD+V+YN LI+GCI   D+  AL +F+ M+   + P++
Sbjct: 460 KQLQIDKAKELLKEMAEDAGIEPDVVSYNILIDGCILVDDSAGALTFFNEMRAKGIAPTK 519

Query: 185 ITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMK 6
           I+YT LMKAFA +GQPK A KVFDEML DP++K D+ AWNML+E YC  G+VE AK +++
Sbjct: 520 ISYTTLMKAFALSGQPKLAHKVFDEMLDDPRVKADIIAWNMLVEGYCKLGLVEEAKKIVQ 579

Query: 5   Q 3
           +
Sbjct: 580 R 580



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
 Frame = -3

Query: 533 QSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQG-LNANHLTYNTLLNGYCVL 357
           + R   + P  I+YTT + AF        AH +  EM     + A+ + +N L+ GYC L
Sbjct: 509 EMRAKGIAPTKISYTTLMKAFALSGQPKLAHKVFDEMLDDPRVKADIIAWNMLVEGYCKL 568

Query: 356 QKMKKAKQLIEEMRDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKK 207
             +++AK++++ M++ G  P++ TY +L NG   A     AL  ++ +K+
Sbjct: 569 GLVEEAKKIVQRMKENGFHPNVATYGSLANGIAVARKPGEALLLWNEVKE 618



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
 Frame = -3

Query: 389 YNTLLNGYCVLQKMKKAKQLIEEMR---DAGIVPDIVTYNTLINGCIEAMDNVSALEYFD 219
           Y TL+ GY    ++    +++E MR   D+   PD V+Y T+++  + +     A + F 
Sbjct: 378 YTTLMKGYMKAGRVTDTVRMLEAMRHQEDSASHPDHVSYTTVVSAFVNSGSMDRARQVFA 437

Query: 218 GMKKAAVRPSEITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLE 54
            M +  V  + ITY +L+K + +  Q   A ++  EM  D  I+ D+ ++N+L++
Sbjct: 438 EMTRIRVPANRITYNILLKGYCKQLQIDKAKELLKEMAEDAGIEPDVVSYNILID 492


>ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Cucumis sativus]
           gi|449483612|ref|XP_004156638.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Cucumis sativus]
          Length = 736

 Score =  185 bits (470), Expect = 5e-45
 Identities = 90/181 (49%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
 Frame = -3

Query: 542 AMQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYC 363
           AM+   D    PDH++YTT +SA V+   ++ A  +L EM   G  AN +TYN LL GYC
Sbjct: 399 AMRNQGDRSSHPDHVSYTTVVSALVKAGSMDRARQVLAEMTRIGCPANRITYNILLKGYC 458

Query: 362 VLQKMKKAKQLIEEMRD-AGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSE 186
            L +M KAK L +EM D AGI PD+V+YN +I+G I   D+  AL +F+ M+   + P++
Sbjct: 459 RLLQMDKAKDLFKEMVDGAGIEPDVVSYNIMIDGSILVDDSAGALGFFNEMRSKGIAPTK 518

Query: 185 ITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMK 6
           ++YT LMKAFA++GQPK A KVFDEML DP++KVD+ AWNML+E YC  G +E AK +++
Sbjct: 519 VSYTTLMKAFAQSGQPKLARKVFDEMLNDPRVKVDIVAWNMLIEGYCRLGWIEEAKQLVQ 578

Query: 5   Q 3
           +
Sbjct: 579 K 579



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
 Frame = -3

Query: 533 QSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQG-LNANHLTYNTLLNGYCVL 357
           + R   + P  ++YTT + AF +      A  +  EM     +  + + +N L+ GYC L
Sbjct: 508 EMRSKGIAPTKVSYTTLMKAFAQSGQPKLARKVFDEMLNDPRVKVDIVAWNMLIEGYCRL 567

Query: 356 QKMKKAKQLIEEMRDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMK-KAAVR 195
             +++AKQL+++M++ G  PD+ TY +L NG   A     AL  ++ +K + AVR
Sbjct: 568 GWIEEAKQLVQKMKENGFFPDVSTYGSLANGISLARKPGEALLLWNEVKERCAVR 622


>ref|XP_006428878.1| hypothetical protein CICLE_v10011148mg [Citrus clementina]
           gi|568853953|ref|XP_006480600.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Citrus sinensis]
           gi|557530935|gb|ESR42118.1| hypothetical protein
           CICLE_v10011148mg [Citrus clementina]
          Length = 740

 Score =  185 bits (469), Expect = 7e-45
 Identities = 91/181 (50%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
 Frame = -3

Query: 542 AMQQSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYC 363
           AM++  D    PDH+TYTT +SA V+   ++ A  +L EM   G+ AN +TYN LL GYC
Sbjct: 395 AMRRQEDDASHPDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPANRITYNILLKGYC 454

Query: 362 VLQKMKKAKQLIEEMRD-AGIVPDIVTYNTLINGCIEAMDNVSALEYFDGMKKAAVRPSE 186
              ++ KAK+L+ EM D A I PD+V+YN LI+G I   D+  AL +F+ M+   + P++
Sbjct: 455 QQLQIDKAKELLREMADDAKIEPDVVSYNILIDGFILIDDSAGALTFFNEMRARGIAPTK 514

Query: 185 ITYTVLMKAFARAGQPKNATKVFDEMLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMK 6
           I+YT LMKAFA + QPK A KVFDEMLRDP++KVD+ AWNML+E YC  G+VE AK +++
Sbjct: 515 ISYTTLMKAFALSSQPKLANKVFDEMLRDPRVKVDIVAWNMLVEGYCRMGLVEEAKRIIE 574

Query: 5   Q 3
           +
Sbjct: 575 R 575



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
 Frame = -3

Query: 533 QSRDPDVRPDHITYTTAISAFVRMDMINEAHALLQEMAMQG-LNANHLTYNTLLNGYCVL 357
           + R   + P  I+YTT + AF        A+ +  EM     +  + + +N L+ GYC +
Sbjct: 504 EMRARGIAPTKISYTTLMKAFALSSQPKLANKVFDEMLRDPRVKVDIVAWNMLVEGYCRM 563

Query: 356 QKMKKAKQLIEEMRDAGIVPDIVTYNTLING 264
             +++AK++IE M++ G  P++ TY +L NG
Sbjct: 564 GLVEEAKRIIERMKENGFYPNVATYGSLANG 594