BLASTX nr result
ID: Ephedra27_contig00029834
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00029834
(668 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006856878.1| hypothetical protein AMTR_s00055p00197790 [A... 71 3e-10
gb|EOX93462.1| Pentatricopeptide repeat-containing protein, puta... 70 4e-10
gb|EOX93461.1| Pentatricopeptide repeat-containing protein, puta... 70 4e-10
ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containi... 70 4e-10
emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera] 70 4e-10
ref|XP_002531694.1| pentatricopeptide repeat-containing protein,... 70 6e-10
gb|EMJ16173.1| hypothetical protein PRUPE_ppa001796mg [Prunus pe... 64 4e-08
gb|EMT17510.1| hypothetical protein F775_17166 [Aegilops tauschii] 62 2e-07
ref|XP_004952915.1| PREDICTED: pentatricopeptide repeat-containi... 61 3e-07
ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containi... 61 3e-07
ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containi... 61 3e-07
gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays] 60 5e-07
ref|XP_006363010.1| PREDICTED: pentatricopeptide repeat-containi... 59 1e-06
ref|XP_006660033.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
ref|XP_006492780.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
ref|XP_006492779.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
ref|XP_006442168.1| hypothetical protein CICLE_v10018770mg [Citr... 58 2e-06
ref|XP_006447755.1| hypothetical protein CICLE_v10014182mg [Citr... 58 3e-06
gb|EOY29997.1| Pentatricopeptide repeat superfamily protein, put... 58 3e-06
gb|EOX91915.1| Pentatricopeptide repeat (PPR) superfamily protei... 58 3e-06
>ref|XP_006856878.1| hypothetical protein AMTR_s00055p00197790 [Amborella trichopoda]
gi|548860812|gb|ERN18345.1| hypothetical protein
AMTR_s00055p00197790 [Amborella trichopoda]
Length = 940
Score = 71.2 bits (173), Expect = 3e-10
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +1
Query: 1 ANRLFDSAVNT-FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLK 177
A LF++ + +NP+E+ WT+LIDG +K+G+S+ CLK L MEEK C P+ +Y +L +
Sbjct: 855 AQALFNNMLGAQWNPNEVIWTVLIDGLLKEGNSEMCLKFLHEMEEKGCTPNFQTYVILAR 914
Query: 178 ELHNHGRDSEAEELENKMR 234
E+ + E E L NK R
Sbjct: 915 EMSKEDKLPETELLANKQR 933
>gb|EOX93462.1| Pentatricopeptide repeat-containing protein, putative isoform 2
[Theobroma cacao] gi|508701567|gb|EOX93463.1|
Pentatricopeptide repeat-containing protein, putative
isoform 2 [Theobroma cacao]
Length = 716
Score = 70.5 bits (171), Expect = 4e-10
Identities = 32/76 (42%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = +1
Query: 10 LFDSAVNT-FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLKELH 186
LF+S + ++ DEI WT+LIDG +K+G+SD C+KLL +ME + C P+ +Y +L +E
Sbjct: 636 LFESLIEKQWSSDEIVWTVLIDGLLKEGESDLCMKLLHVMESRNCPPNFQTYVILAREFS 695
Query: 187 NHGRDSEAEELENKMR 234
+G E +++ NK+R
Sbjct: 696 KYGL-IEVDQIGNKLR 710
>gb|EOX93461.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao]
Length = 909
Score = 70.5 bits (171), Expect = 4e-10
Identities = 32/76 (42%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = +1
Query: 10 LFDSAVNT-FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLKELH 186
LF+S + ++ DEI WT+LIDG +K+G+SD C+KLL +ME + C P+ +Y +L +E
Sbjct: 829 LFESLIEKQWSSDEIVWTVLIDGLLKEGESDLCMKLLHVMESRNCPPNFQTYVILAREFS 888
Query: 187 NHGRDSEAEELENKMR 234
+G E +++ NK+R
Sbjct: 889 KYGL-IEVDQIGNKLR 903
>ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 70.5 bits (171), Expect = 4e-10
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +1
Query: 1 ANRLFDSAVNT-FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLK 177
A LFD+ + +N DEI WT+L+DG +K+G+ D C+KLL IME K P+ +Y +L +
Sbjct: 738 AQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGR 797
Query: 178 ELHNHGRDSEAEELENKMR 234
EL G+ E+E L +K++
Sbjct: 798 ELSRIGKSIESEPLADKLK 816
Score = 57.0 bits (136), Expect = 5e-06
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = +1
Query: 37 NPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLKELHNHGRDSEAEE 216
NP+ +++T LIDG K G D L LL+ MEE C P+ SY ++ L R SEAE+
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569
Query: 217 LENKMRANGI 246
+ +KM G+
Sbjct: 570 ICDKMVEQGL 579
>emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 70.5 bits (171), Expect = 4e-10
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +1
Query: 1 ANRLFDSAVNT-FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLK 177
A LFD+ + +N DEI WT+L+DG +K+G+ D C+KLL IME K P+ +Y +L +
Sbjct: 878 AQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGR 937
Query: 178 ELHNHGRDSEAEELENKMR 234
EL G+ E+E L +K++
Sbjct: 938 ELSRIGKSIESEPLADKLK 956
Score = 58.2 bits (139), Expect = 2e-06
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = +1
Query: 37 NPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLKELHNHGRDSEAEE 216
NP+ +++T LIDG K G D L LL+ MEE C P+ SY ++ L R SEAE+
Sbjct: 552 NPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEK 611
Query: 217 LENKMRANGI 246
+ +KM G+
Sbjct: 612 ICDKMAEQGL 621
>ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528670|gb|EEF30685.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 821
Score = 70.1 bits (170), Expect = 6e-10
Identities = 28/67 (41%), Positives = 46/67 (68%)
Frame = +1
Query: 34 FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLKELHNHGRDSEAE 213
+N D I WT+L+DG +++GDSD C+K L +ME + C PS H+Y +L +EL G+ +
Sbjct: 749 WNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTD 808
Query: 214 ELENKMR 234
++ N++R
Sbjct: 809 QIGNRLR 815
>gb|EMJ16173.1| hypothetical protein PRUPE_ppa001796mg [Prunus persica]
Length = 763
Score = 63.9 bits (154), Expect = 4e-08
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Frame = +1
Query: 1 ANRLFDSAVNT-FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLK 177
A LF S + +N DEI WT+LIDG +K+G SD C+KLL ++E ++C S +Y +L +
Sbjct: 679 AETLFKSMLEKQWNTDEIVWTVLIDGLLKEGQSDLCMKLLHVIESQKCSISFQTYDILAR 738
Query: 178 ELH--NHGRDS 204
EL N GR S
Sbjct: 739 ELSKVNKGRGS 749
>gb|EMT17510.1| hypothetical protein F775_17166 [Aegilops tauschii]
Length = 683
Score = 62.0 bits (149), Expect = 2e-07
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +1
Query: 34 FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLKELHNHG 195
+NPDEI W ++IDG ++ G SD C ++ +E++ C+PS +Y ML +EL G
Sbjct: 630 YNPDEIVWKVIIDGLIRNGHSDICRDMVSKLEQRNCRPSNQTYAMLAEELSTRG 683
>ref|XP_004952915.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Setaria italica]
Length = 820
Score = 61.2 bits (147), Expect = 3e-07
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +1
Query: 16 DSAVNTFNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLKEL 183
DS +NPDEI W ++IDGF++KG SD C ++ +E+ C+ S +Y ML +EL
Sbjct: 761 DSRWKDYNPDEIVWKVIIDGFIRKGRSDMCHDMISTLEQMNCKLSDQTYAMLTEEL 816
>ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 61.2 bits (147), Expect = 3e-07
Identities = 24/50 (48%), Positives = 37/50 (74%)
Frame = +1
Query: 34 FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLKEL 183
+N DE+ WT+L+DG +K+G++D CLKLL +ME + C + +Y ML +EL
Sbjct: 760 WNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809
>ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 61.2 bits (147), Expect = 3e-07
Identities = 24/50 (48%), Positives = 37/50 (74%)
Frame = +1
Query: 34 FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLKEL 183
+N DE+ WT+L+DG +K+G++D CLKLL +ME + C + +Y ML +EL
Sbjct: 760 WNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809
>gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 60.5 bits (145), Expect = 5e-07
Identities = 22/50 (44%), Positives = 37/50 (74%)
Frame = +1
Query: 34 FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLKEL 183
+N DEI W ++IDGF++KG +D C ++ ++E+ +C+PS +Y ML +EL
Sbjct: 767 YNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816
>ref|XP_006363010.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
isoform X1 [Solanum tuberosum]
gi|565394734|ref|XP_006363011.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like isoform X2 [Solanum tuberosum]
gi|565394736|ref|XP_006363012.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like isoform X3 [Solanum tuberosum]
Length = 913
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +1
Query: 34 FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLKEL 183
+N DEI WTILIDG +K+ +S+ C+KLL +ME K C S +Y +L +EL
Sbjct: 859 WNNDEIVWTILIDGLLKERESELCMKLLHVMESKSCNISFQTYVILAREL 908
>ref|XP_006660033.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
[Oryza brachyantha]
Length = 909
Score = 58.2 bits (139), Expect = 2e-06
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +1
Query: 31 TFNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLKE 180
T+NPD++ T+LIDG ++ G D C++ LQIME C PS H Y +L +E
Sbjct: 857 TWNPDDVVQTVLIDGLLRAGLKDVCMEFLQIMETSHCVPSFHMYTILARE 906
>ref|XP_006492780.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
isoform X2 [Citrus sinensis]
Length = 910
Score = 58.2 bits (139), Expect = 2e-06
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +1
Query: 34 FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLKEL 183
+N DE+ W ILIDG +KKG +D C +LL IME+K CQ +Y ML++ L
Sbjct: 858 YNADEVAWKILIDGLLKKGLADKCSELLDIMEKKGCQIKSPTYAMLIEGL 907
>ref|XP_006492779.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
isoform X1 [Citrus sinensis]
Length = 922
Score = 58.2 bits (139), Expect = 2e-06
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +1
Query: 34 FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLKEL 183
+N DE+ W ILIDG +KKG +D C +LL IME+K CQ +Y ML++ L
Sbjct: 858 YNADEVAWKILIDGLLKKGLADKCSELLDIMEKKGCQIKSPTYAMLIEGL 907
>ref|XP_006442168.1| hypothetical protein CICLE_v10018770mg [Citrus clementina]
gi|557544430|gb|ESR55408.1| hypothetical protein
CICLE_v10018770mg [Citrus clementina]
Length = 910
Score = 58.2 bits (139), Expect = 2e-06
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +1
Query: 34 FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLKEL 183
+N DE+ W ILIDG +KKG +D C +LL IME+K CQ +Y ML++ L
Sbjct: 858 YNADEVAWKILIDGLLKKGLADKCSELLDIMEKKGCQIKSPTYAMLIEGL 907
>ref|XP_006447755.1| hypothetical protein CICLE_v10014182mg [Citrus clementina]
gi|568830449|ref|XP_006469511.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like [Citrus sinensis]
gi|557550366|gb|ESR60995.1| hypothetical protein
CICLE_v10014182mg [Citrus clementina]
Length = 929
Score = 57.8 bits (138), Expect = 3e-06
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 ANRLFDSAVNT-FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLK 177
A+RLF V +P+++ +T +IDG+ K+G D L L + ME+ C+P +Y ++
Sbjct: 496 ASRLFSEMVERGLSPNQVNYTAMIDGYFKEGKIDVALSLFEKMEQNNCRPKIETYNAIIN 555
Query: 178 ELHNHGRDSEAEELENKMRANGI 246
L R EAE+L KM G+
Sbjct: 556 GLSKDNRLLEAEKLCGKMAEQGL 578
Score = 57.8 bits (138), Expect = 3e-06
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +1
Query: 1 ANRLFDSAVNT-FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLK 177
A F+S ++ +N DEI WT+L+DG V KG D CLK L IME + C + +Y +L
Sbjct: 835 AQHFFESMLDKQWNTDEIVWTVLVDGLVTKGLPDLCLKFLHIMESRNCCINLQTYVILAN 894
Query: 178 ELHNHGRDSEAEELENKM 231
EL + + + L ++
Sbjct: 895 ELSKVDKSIDTDHLVKRV 912
>gb|EOY29997.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 722
Score = 57.8 bits (138), Expect = 3e-06
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Frame = +1
Query: 1 ANRLFDSAVNTFN--PDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLL 174
A+ LF VN + PD +T+T LIDG+ KKG+ + +K + M + C P+ +Y ++
Sbjct: 246 ASYLFYQMVNEVDCLPDTVTYTTLIDGYCKKGEFEEAMKYMDKMVKTGCLPNVLTYNAII 305
Query: 175 KELHNHGRDSEAEELENKMRANGI---TLQESAAF*FSCYIKQRKFGLRYF 318
L G EA+ + +KMR NG+ T + C + + K + YF
Sbjct: 306 YALCLKGEVDEAKRMMSKMRLNGVEDNTATHMSILKGLCVVGRSKEAIEYF 356
>gb|EOX91915.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
1 [Theobroma cacao] gi|508700020|gb|EOX91916.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative isoform 1 [Theobroma cacao]
Length = 946
Score = 57.8 bits (138), Expect = 3e-06
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +1
Query: 1 ANRLFDSAVNT-FNPDEITWTILIDGFVKKGDSDTCLKLLQIMEEKQCQPSGHSYKMLLK 177
+N +FD+ + +N DE+ W +LIDG +KKG +D C +LL IME+ CQ ++Y ML+
Sbjct: 882 SNMVFDNLLRCGYNSDEVAWKVLIDGLLKKGLADRCSELLSIMEKMGCQLHPNTYSMLIA 941
Query: 178 EL 183
L
Sbjct: 942 GL 943