BLASTX nr result
ID: Ephedra27_contig00029809
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00029809
(511 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE75749.1| unknown [Picea sitchensis] 89 5e-16
ref|XP_002967805.1| hypothetical protein SELMODRAFT_440021 [Sela... 83 4e-14
ref|XP_002981721.1| hypothetical protein SELMODRAFT_421246 [Sela... 83 4e-14
ref|XP_001783243.1| predicted protein [Physcomitrella patens] gi... 79 5e-13
ref|XP_006843762.1| hypothetical protein AMTR_s00007p00238780 [A... 71 2e-10
gb|AAT08661.1| single-stranded DNA-binding replication protein A... 65 1e-08
gb|ACR37769.1| unknown [Zea mays] gi|413939585|gb|AFW74136.1| hy... 62 8e-08
gb|ACG31701.1| replication protein A 32 kDa subunit [Zea mays] 62 8e-08
ref|NP_001140245.1| uncharacterized protein LOC100272286 [Zea ma... 62 8e-08
gb|ACF80654.1| unknown [Zea mays] gi|413939586|gb|AFW74137.1| re... 62 8e-08
ref|XP_002740859.2| PREDICTED: replication protein A 32 kDa subu... 61 2e-07
ref|XP_002468676.1| hypothetical protein SORBIDRAFT_01g050092 [S... 60 2e-07
ref|XP_005651058.1| replication protein A, subunit RPA32 [Coccom... 59 7e-07
ref|XP_006845815.1| hypothetical protein AMTR_s00019p00256940 [A... 59 9e-07
ref|XP_002454830.1| hypothetical protein SORBIDRAFT_04g038190 [S... 58 1e-06
ref|XP_006298263.1| hypothetical protein CARUB_v10014327mg [Caps... 58 1e-06
ref|XP_006648165.1| PREDICTED: replication protein A 32 kDa subu... 57 3e-06
ref|XP_006450138.1| hypothetical protein CICLE_v10009139mg [Citr... 57 3e-06
ref|XP_002502941.1| predicted protein [Micromonas sp. RCC299] gi... 57 3e-06
gb|EMJ24407.1| hypothetical protein PRUPE_ppa010030mg [Prunus pe... 57 3e-06
>gb|ADE75749.1| unknown [Picea sitchensis]
Length = 281
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/68 (57%), Positives = 55/68 (80%)
Frame = -2
Query: 510 SKDLFEKVRDIFDEPQHLVREQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDD 331
+KDL V+ IF+EP +L E GVH+D++ RRL G++++QIM++I FL N+G IYSTID+
Sbjct: 214 AKDLNRMVQSIFEEPANLAIEHGVHVDDVVRRLHGFTKKQIMESIAFLINEGYIYSTIDE 273
Query: 330 DHFKSTNG 307
DH+KSTNG
Sbjct: 274 DHYKSTNG 281
>ref|XP_002967805.1| hypothetical protein SELMODRAFT_440021 [Selaginella moellendorffii]
gi|300164543|gb|EFJ31152.1| hypothetical protein
SELMODRAFT_440021 [Selaginella moellendorffii]
Length = 279
Score = 82.8 bits (203), Expect = 4e-14
Identities = 34/61 (55%), Positives = 50/61 (81%)
Frame = -2
Query: 492 KVRDIFDEPQHLVREQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDDDHFKST 313
+V+ +F+EP EQG+H+DEIARR+ G+S++Q+ DA+ FL N+G +YST+DD+HFKST
Sbjct: 217 RVQAVFEEPSVKESEQGLHVDEIARRITGFSKKQVRDAVEFLVNEGYVYSTVDDEHFKST 276
Query: 312 N 310
N
Sbjct: 277 N 277
>ref|XP_002981721.1| hypothetical protein SELMODRAFT_421246 [Selaginella moellendorffii]
gi|300150553|gb|EFJ17203.1| hypothetical protein
SELMODRAFT_421246 [Selaginella moellendorffii]
Length = 279
Score = 82.8 bits (203), Expect = 4e-14
Identities = 34/61 (55%), Positives = 50/61 (81%)
Frame = -2
Query: 492 KVRDIFDEPQHLVREQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDDDHFKST 313
+V+ +F+EP EQG+H+DEIARR+ G+S++Q+ DA+ FL N+G +YST+DD+HFKST
Sbjct: 217 RVQAVFEEPSVKESEQGLHVDEIARRITGFSKKQVRDAVEFLVNEGYVYSTVDDEHFKST 276
Query: 312 N 310
N
Sbjct: 277 N 277
>ref|XP_001783243.1| predicted protein [Physcomitrella patens]
gi|162665247|gb|EDQ51938.1| predicted protein
[Physcomitrella patens]
Length = 285
Score = 79.3 bits (194), Expect = 5e-13
Identities = 34/62 (54%), Positives = 48/62 (77%)
Frame = -2
Query: 492 KVRDIFDEPQHLVREQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDDDHFKST 313
+V I++EP L EQG+H+D++ +R+ G++R Q+ +AI FL N+G IYSTIDDDH KST
Sbjct: 224 RVHSIYEEPASLQVEQGLHVDQVVQRMVGFTRAQVREAIDFLVNEGYIYSTIDDDHHKST 283
Query: 312 NG 307
NG
Sbjct: 284 NG 285
>ref|XP_006843762.1| hypothetical protein AMTR_s00007p00238780 [Amborella trichopoda]
gi|548846130|gb|ERN05437.1| hypothetical protein
AMTR_s00007p00238780 [Amborella trichopoda]
Length = 278
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/63 (49%), Positives = 48/63 (76%)
Frame = -2
Query: 504 DLFEKVRDIFDEPQHLVREQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDDDH 325
D+ +V+ +F EP L ++G+H+DE+A+RLPG S+Q+IM AI FL +G IYSTI+D +
Sbjct: 212 DINTRVKKVFMEPDALKNDEGLHVDEVAQRLPGISKQRIMKAIDFLVGEGEIYSTINDYY 271
Query: 324 FKS 316
+K+
Sbjct: 272 YKA 274
>gb|AAT08661.1| single-stranded DNA-binding replication protein A [Hyacinthus
orientalis]
Length = 88
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/64 (46%), Positives = 44/64 (68%)
Frame = -2
Query: 504 DLFEKVRDIFDEPQHLVREQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDDDH 325
D+++ V D+F EP L + GVH+DE+ +RL G ++I +AI + + G IYSTIDD H
Sbjct: 26 DIYKMVLDVFQEPSSLASDHGVHVDEVVKRL-GLPEKKIKEAIDYHVDTGHIYSTIDDYH 84
Query: 324 FKST 313
FK+T
Sbjct: 85 FKAT 88
>gb|ACR37769.1| unknown [Zea mays] gi|413939585|gb|AFW74136.1| hypothetical protein
ZEAMMB73_174168 [Zea mays]
Length = 307
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/64 (43%), Positives = 43/64 (67%)
Frame = -2
Query: 504 DLFEKVRDIFDEPQHLVREQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDDDH 325
DL +V + F+EP +L E GVH+DE+ +R ++QI DAI + + G +YSTID+ H
Sbjct: 244 DLHTQVLNFFNEPANLESEHGVHVDEVLKRFKLLPKKQITDAIDYNMDSGRLYSTIDEFH 303
Query: 324 FKST 313
+K+T
Sbjct: 304 YKAT 307
>gb|ACG31701.1| replication protein A 32 kDa subunit [Zea mays]
Length = 273
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/64 (43%), Positives = 43/64 (67%)
Frame = -2
Query: 504 DLFEKVRDIFDEPQHLVREQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDDDH 325
DL +V + F+EP +L E GVH+DE+ +R ++QI DAI + + G +YSTID+ H
Sbjct: 210 DLHTQVLNFFNEPANLESEHGVHVDEVLKRFKLLPKKQITDAIDYNMDSGRLYSTIDEFH 269
Query: 324 FKST 313
+K+T
Sbjct: 270 YKAT 273
>ref|NP_001140245.1| uncharacterized protein LOC100272286 [Zea mays]
gi|194698682|gb|ACF83425.1| unknown [Zea mays]
gi|413939584|gb|AFW74135.1| hypothetical protein
ZEAMMB73_174168 [Zea mays]
Length = 188
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/64 (43%), Positives = 43/64 (67%)
Frame = -2
Query: 504 DLFEKVRDIFDEPQHLVREQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDDDH 325
DL +V + F+EP +L E GVH+DE+ +R ++QI DAI + + G +YSTID+ H
Sbjct: 125 DLHTQVLNFFNEPANLESEHGVHVDEVLKRFKLLPKKQITDAIDYNMDSGRLYSTIDEFH 184
Query: 324 FKST 313
+K+T
Sbjct: 185 YKAT 188
>gb|ACF80654.1| unknown [Zea mays] gi|413939586|gb|AFW74137.1| replication protein
A subunit [Zea mays]
Length = 273
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/64 (43%), Positives = 43/64 (67%)
Frame = -2
Query: 504 DLFEKVRDIFDEPQHLVREQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDDDH 325
DL +V + F+EP +L E GVH+DE+ +R ++QI DAI + + G +YSTID+ H
Sbjct: 210 DLHTQVLNFFNEPANLESEHGVHVDEVLKRFKLLPKKQITDAIDYNMDSGRLYSTIDEFH 269
Query: 324 FKST 313
+K+T
Sbjct: 270 YKAT 273
>ref|XP_002740859.2| PREDICTED: replication protein A 32 kDa subunit-like [Saccoglossus
kowalevskii]
Length = 241
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/47 (59%), Positives = 36/47 (76%)
Frame = -2
Query: 450 EQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDDDHFKSTN 310
+ G+ ID I +RL G S+ I +A+ FLSN+G IYSTIDDDHFKST+
Sbjct: 194 DTGISIDVIGQRLRGMSKDAIRNAVEFLSNEGHIYSTIDDDHFKSTD 240
>ref|XP_002468676.1| hypothetical protein SORBIDRAFT_01g050092 [Sorghum bicolor]
gi|241922530|gb|EER95674.1| hypothetical protein
SORBIDRAFT_01g050092 [Sorghum bicolor]
Length = 83
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/63 (50%), Positives = 41/63 (65%)
Frame = -2
Query: 504 DLFEKVRDIFDEPQHLVREQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDDDH 325
DL ++V DI EP ++ RE GVH+DEI +R + I DAI L + G IY+TIDD H
Sbjct: 13 DLLKQVLDILHEPANIEREHGVHVDEIVKRF-RLPERNIRDAIMQLVDMGCIYNTIDDFH 71
Query: 324 FKS 316
FKS
Sbjct: 72 FKS 74
>ref|XP_005651058.1| replication protein A, subunit RPA32 [Coccomyxa subellipsoidea
C-169] gi|384253039|gb|EIE26514.1| replication protein
A, subunit RPA32 [Coccomyxa subellipsoidea C-169]
Length = 277
Score = 58.9 bits (141), Expect = 7e-07
Identities = 22/60 (36%), Positives = 42/60 (70%)
Frame = -2
Query: 492 KVRDIFDEPQHLVREQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDDDHFKST 313
KV +F++P HL +G+ +++++ +LP + +Q+ DA+TFL ++ IY+ D+ H+KST
Sbjct: 215 KVLSVFEQPAHLASSEGITVEQVSAQLPNLTPKQVRDAVTFLMDNANIYTVSDEYHYKST 274
>ref|XP_006845815.1| hypothetical protein AMTR_s00019p00256940 [Amborella trichopoda]
gi|548848387|gb|ERN07490.1| hypothetical protein
AMTR_s00019p00256940 [Amborella trichopoda]
Length = 300
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/64 (42%), Positives = 46/64 (71%)
Frame = -2
Query: 507 KDLFEKVRDIFDEPQHLVREQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDDD 328
+D+ +VR +F +P L + G+H+DE ARRLPG +++I+ I FL+++G IYSTI++
Sbjct: 234 EDICNRVRIVFMDPAALEND-GLHVDEAARRLPGIPKERILKVIGFLADEGEIYSTINES 292
Query: 327 HFKS 316
++S
Sbjct: 293 VYRS 296
>ref|XP_002454830.1| hypothetical protein SORBIDRAFT_04g038190 [Sorghum bicolor]
gi|241934661|gb|EES07806.1| hypothetical protein
SORBIDRAFT_04g038190 [Sorghum bicolor]
Length = 278
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = -2
Query: 504 DLFEKVRDIFDEPQHLVREQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDDDH 325
DL ++V F EP +L E GVH+DE+ ++ + +I +AI F + G +YSTIDD H
Sbjct: 212 DLNKQVLHFFSEPANLESEHGVHVDEVYKQFKQLPKDKIKEAIAFHVDAGHLYSTIDDFH 271
Query: 324 FKS 316
FKS
Sbjct: 272 FKS 274
>ref|XP_006298263.1| hypothetical protein CARUB_v10014327mg [Capsella rubella]
gi|482566972|gb|EOA31161.1| hypothetical protein
CARUB_v10014327mg [Capsella rubella]
Length = 284
Score = 57.8 bits (138), Expect = 1e-06
Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = -2
Query: 495 EKVRDIFDEPQHLVREQGVHIDEIAR--RLPGYSRQQIMDAITFLSNDGAIYSTIDDDHF 322
+ V + ++P HLV E GVH D IAR R+P Q+ +AI LSNDG +YST+DD F
Sbjct: 222 QTVLNYLNQPMHLVSEAGVHCDIIARDLRIPPL---QVREAIEQLSNDGCVYSTVDDTCF 278
Query: 321 KST 313
KST
Sbjct: 279 KST 281
>ref|XP_006648165.1| PREDICTED: replication protein A 32 kDa subunit A-like [Oryza
brachyantha]
Length = 279
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/63 (47%), Positives = 41/63 (65%)
Frame = -2
Query: 504 DLFEKVRDIFDEPQHLVREQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDDDH 325
DL E+V IF EP ++ E GVH+DEI +R +I +A+ +L + G IYSTIDD H
Sbjct: 214 DLHEQVLKIFREPANVESEHGVHVDEIVKRF-RLPTPKIREAVDYLVDVGHIYSTIDDFH 272
Query: 324 FKS 316
+KS
Sbjct: 273 YKS 275
>ref|XP_006450138.1| hypothetical protein CICLE_v10009139mg [Citrus clementina]
gi|568860158|ref|XP_006483593.1| PREDICTED: replication
protein A 32 kDa subunit A-like [Citrus sinensis]
gi|557553364|gb|ESR63378.1| hypothetical protein
CICLE_v10009139mg [Citrus clementina]
Length = 280
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/67 (40%), Positives = 43/67 (64%)
Frame = -2
Query: 507 KDLFEKVRDIFDEPQHLVREQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDDD 328
KD + + D +P RE+GVH++E++ +L +++IMD+I L N+G IYSTID+
Sbjct: 215 KDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEF 273
Query: 327 HFKSTNG 307
H+K G
Sbjct: 274 HYKFARG 280
>ref|XP_002502941.1| predicted protein [Micromonas sp. RCC299]
gi|226518207|gb|ACO64199.1| predicted protein
[Micromonas sp. RCC299]
Length = 250
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = -2
Query: 495 EKVRDIFDEPQHLVREQGVHIDEIARRLPG-YSRQQIMDAITFLSNDGAIYSTIDDDHFK 319
++ + IF+ P R++GV ID + ++L G ++ Q+ +A+ L N+G +YSTIDDDHFK
Sbjct: 188 DQAKAIFEGPDGR-RDEGVKIDVVVQQLNGRFTEAQVREAVEHLVNEGHLYSTIDDDHFK 246
Query: 318 STN 310
STN
Sbjct: 247 STN 249
>gb|EMJ24407.1| hypothetical protein PRUPE_ppa010030mg [Prunus persica]
Length = 267
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = -2
Query: 492 KVRDIFDEPQHLVREQGVHIDEIARRLPGYSRQQIMDAITFLSNDGAIYSTIDDDHFKST 313
KV +I +P +L RE+G H+D+IAR+L +M A+ L +G +YST+DD HFKST
Sbjct: 206 KVLEILSQPSYLGREEGAHLDDIARQLK-IPVNDLMLAVDNLVQEGKVYSTVDDFHFKST 264