BLASTX nr result
ID: Ephedra27_contig00029762
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00029762
(644 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006646507.1| PREDICTED: DNA polymerase alpha catalytic su... 75 1e-11
ref|XP_004289559.1| PREDICTED: DNA polymerase alpha catalytic su... 75 1e-11
ref|XP_004970715.1| PREDICTED: DNA polymerase alpha catalytic su... 73 8e-11
ref|XP_003567311.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymera... 72 1e-10
sp|O48653.2|DPOLA_ORYSJ RecName: Full=DNA polymerase alpha catal... 71 2e-10
gb|EEE55728.1| hypothetical protein OsJ_04212 [Oryza sativa Japo... 71 2e-10
gb|EEC71866.1| hypothetical protein OsI_04575 [Oryza sativa Indi... 71 2e-10
dbj|BAD81999.1| putative DNA polymerase alpha catalytic subunit ... 71 2e-10
gb|EXB54380.1| DNA polymerase alpha catalytic subunit [Morus not... 71 3e-10
gb|EMJ05885.1| hypothetical protein PRUPE_ppa000171mg [Prunus pe... 71 3e-10
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su... 69 9e-10
emb|CBI21412.3| unnamed protein product [Vitis vinifera] 69 9e-10
emb|CBH32591.1| unnamed protein product [Triticum aestivum] 68 3e-09
emb|CBH32589.1| DNA polymerase alpha catalytic subunit,putative,... 67 4e-09
tpg|DAA56645.1| TPA: hypothetical protein ZEAMMB73_505723 [Zea m... 66 8e-09
tpg|DAA56644.1| TPA: hypothetical protein ZEAMMB73_505723 [Zea m... 66 8e-09
ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic su... 66 1e-08
ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic su... 66 1e-08
ref|XP_001779378.1| predicted protein [Physcomitrella patens] gi... 65 2e-08
ref|XP_006847112.1| hypothetical protein AMTR_s00017p00221560 [A... 64 3e-08
>ref|XP_006646507.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
[Oryza brachyantha]
Length = 1460
Score = 75.5 bits (184), Expect = 1e-11
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Frame = -2
Query: 472 PKVSRKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDKKGLAFSADSILEDLLA 293
P+ S +SL+AAAA+MGKQ++SSMF S+ + G+ D KG + +ADSI++D++A
Sbjct: 55 PQQSAAAASLSAAAAMMGKQRLSSMFTSSVFKKPGS-----DRSKGSSLAADSIVDDVIA 109
Query: 292 EITPDEADKEKRRRQRPAVLKPGPAD---VETRLSNGSQRCSLAARS 161
E PD+ D+E+RRR+ V P PA V + N + A RS
Sbjct: 110 EFAPDDNDREERRRRVGRVCAPAPAPTPIVHIKAENAAVNTETAFRS 156
>ref|XP_004289559.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Fragaria
vesca subsp. vesca]
Length = 1532
Score = 75.5 bits (184), Expect = 1e-11
Identities = 43/95 (45%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Frame = -2
Query: 472 PKVSRKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDKKGLAFSADSILEDLLA 293
P+V + +SL AAAA+MGKQ++SSMF S+ + +RD KG S DSI+++++A
Sbjct: 127 PRVKKPNASLTAAAAMMGKQRLSSMFTSSVFNK------SRDGDKGKGLSCDSIVDEVIA 180
Query: 292 EITPDEADKEKRRRQRPA-VLKPGPADVETRLSNG 191
E PDEAD+EKRRR +P P R+SNG
Sbjct: 181 EFAPDEADREKRRRAQPVKSFVPIRGVKSERVSNG 215
>ref|XP_004970715.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Setaria
italica]
Length = 1536
Score = 72.8 bits (177), Expect = 8e-11
Identities = 54/159 (33%), Positives = 81/159 (50%), Gaps = 2/159 (1%)
Frame = -2
Query: 472 PKVSRKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDKKGLAFSADSILEDLLA 293
P+ S +SL+AAAA+MGKQ++ +MF S + G+ D KG A ADSI++D++A
Sbjct: 130 PQQSAAAASLSAAAAMMGKQRIPTMFTSPMFKKPGS-----DRNKGSALVADSIVDDVIA 184
Query: 292 EITPDEADKEKRRRQRPAVLKPGPADVETRLSNGSQRCSLAARSFTRQLEGSTLSEIKQE 113
E PD+ D+E+RRR+ V P P N S++ A + R G +
Sbjct: 185 EFAPDDNDREERRRRVSRVSAPQPPPPIIAHIN-SEKVVADAETVVRSDTGFETDGVSDH 243
Query: 112 ASDTV--LCNDSLLDLPVEIPNDVVPQHLASENKTVEEI 2
+D V L D + +E + HL ENK+ EE+
Sbjct: 244 GNDMVVELKPDDEMATKLEEASG-SSAHLVVENKSSEEL 281
>ref|XP_003567311.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha catalytic
subunit-like [Brachypodium distachyon]
Length = 1538
Score = 72.4 bits (176), Expect = 1e-10
Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Frame = -2
Query: 472 PKVSRKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDKKGLAFSADSILEDLLA 293
P+ S +SL+AAAA+MGKQ++SSMF S+ + G+ D KG +ADSI++D++A
Sbjct: 130 PQQSAAAASLSAAAAMMGKQRLSSMFTSSVFKKPGS-----DRTKGSP-AADSIVDDVIA 183
Query: 292 EITPDEADKEKRRRQRPAVLKPGPADVETRLSNGSQRCSLAARSFTRQLEGSTLSEIKQE 113
E PD+ D+E+RRR+ + P P + ++AA R GS +
Sbjct: 184 EFAPDDNDREERRRRVGRICAPTPPPAPVAHIKAVKAAAVAAELGFRSDYGSEPDGVSDH 243
Query: 112 ASDTVLCNDSLLDLPVEIPNDVVPQ-----------HLASENKTVEEI 2
+D D L VE+ +DV Q LA NK+ EE+
Sbjct: 244 GNDM----DVELKPEVELRSDVEAQPELVATSDSRAELADVNKSSEEL 287
>sp|O48653.2|DPOLA_ORYSJ RecName: Full=DNA polymerase alpha catalytic subunit
Length = 1534
Score = 71.2 bits (173), Expect = 2e-10
Identities = 41/89 (46%), Positives = 57/89 (64%)
Frame = -2
Query: 472 PKVSRKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDKKGLAFSADSILEDLLA 293
P+ S +SL+AAAA+MGKQ++SSMF S S RK RD + +ADSI++D++A
Sbjct: 129 PQQSAAAASLSAAAAMMGKQRLSSMFTS-SVFRKPGSDRGRDS----SLAADSIVDDVIA 183
Query: 292 EITPDEADKEKRRRQRPAVLKPGPADVET 206
E PD+ D+E+RRR+ V P PA T
Sbjct: 184 EFAPDDNDREERRRRVGRVCAPAPAPTTT 212
>gb|EEE55728.1| hypothetical protein OsJ_04212 [Oryza sativa Japonica Group]
Length = 1523
Score = 71.2 bits (173), Expect = 2e-10
Identities = 41/89 (46%), Positives = 57/89 (64%)
Frame = -2
Query: 472 PKVSRKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDKKGLAFSADSILEDLLA 293
P+ S +SL+AAAA+MGKQ++SSMF S S RK RD + +ADSI++D++A
Sbjct: 130 PQQSAAAASLSAAAAMMGKQRLSSMFTS-SVFRKPGSDRGRDS----SLAADSIVDDVIA 184
Query: 292 EITPDEADKEKRRRQRPAVLKPGPADVET 206
E PD+ D+E+RRR+ V P PA T
Sbjct: 185 EFAPDDNDREERRRRVGRVCAPAPAPTTT 213
>gb|EEC71866.1| hypothetical protein OsI_04575 [Oryza sativa Indica Group]
Length = 1532
Score = 71.2 bits (173), Expect = 2e-10
Identities = 41/89 (46%), Positives = 57/89 (64%)
Frame = -2
Query: 472 PKVSRKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDKKGLAFSADSILEDLLA 293
P+ S +SL+AAAA+MGKQ++SSMF S S RK RD + +ADSI++D++A
Sbjct: 129 PQQSAAAASLSAAAAMMGKQRLSSMFTS-SVFRKPGSDRGRDS----SLAADSIVDDVIA 183
Query: 292 EITPDEADKEKRRRQRPAVLKPGPADVET 206
E PD+ D+E+RRR+ V P PA T
Sbjct: 184 EFAPDDNDREERRRRVGRVCAPAPAPTTT 212
>dbj|BAD81999.1| putative DNA polymerase alpha catalytic subunit [Oryza sativa
Japonica Group]
Length = 1532
Score = 71.2 bits (173), Expect = 2e-10
Identities = 41/89 (46%), Positives = 57/89 (64%)
Frame = -2
Query: 472 PKVSRKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDKKGLAFSADSILEDLLA 293
P+ S +SL+AAAA+MGKQ++SSMF S S RK RD + +ADSI++D++A
Sbjct: 129 PQQSAAAASLSAAAAMMGKQRLSSMFTS-SVFRKPGSDRGRDS----SLAADSIVDDVIA 183
Query: 292 EITPDEADKEKRRRQRPAVLKPGPADVET 206
E PD+ D+E+RRR+ V P PA T
Sbjct: 184 EFAPDDNDREERRRRVGRVCAPAPAPTTT 212
>gb|EXB54380.1| DNA polymerase alpha catalytic subunit [Morus notabilis]
Length = 1551
Score = 70.9 bits (172), Expect = 3e-10
Identities = 37/75 (49%), Positives = 53/75 (70%)
Frame = -2
Query: 469 KVSRKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDKKGLAFSADSILEDLLAE 290
K S ++SL+AAAA+MGKQ++SSMF S+ R D+KG+ S +SI++D++AE
Sbjct: 75 KPSAASASLSAAAAMMGKQRLSSMFTSSVFKRNR-------DEKGIGLSCESIVDDVIAE 127
Query: 289 ITPDEADKEKRRRQR 245
PDEAD+E+RRR R
Sbjct: 128 FAPDEADRERRRRAR 142
>gb|EMJ05885.1| hypothetical protein PRUPE_ppa000171mg [Prunus persica]
Length = 1537
Score = 70.9 bits (172), Expect = 3e-10
Identities = 58/159 (36%), Positives = 82/159 (51%), Gaps = 7/159 (4%)
Frame = -2
Query: 460 RKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDKKGLAFSADSILEDLLAEITP 281
+ SSL AAAA+MGKQ++SSMF S+ G RD+++G + DSI++D++AE P
Sbjct: 131 KPNSSLTAAAAMMGKQRLSSMFTSSV------FGKTRDNERGKGLNCDSIVDDVIAEFAP 184
Query: 280 DEADKEKRRRQRPAVLKPGPADVETRLSNGSQRCSLAARSFTRQLEGSTLSEIKQEASDT 101
DE D+EKRRR + V+ S+R S TR+ E L + SD+
Sbjct: 185 DEEDREKRRRGHSNKSFMPISCVK------SERGSDGGVGLTRRAE---LDVVVANGSDS 235
Query: 100 VLC------NDSLLDLPVEIPNDVVPQ-HLASENKTVEE 5
VL N++ DL E+ + Q H SEN V E
Sbjct: 236 VLINEGANENEAKKDLGFELDDPPSEQTHNVSENGGVIE 274
>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
vinifera]
Length = 1522
Score = 69.3 bits (168), Expect = 9e-10
Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -2
Query: 460 RKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDK-KGLAFSADSILEDLLAEIT 284
+K S L+AAAA+MGKQ++SSMF S S +K +RDDK KGL S DSI++D++AE
Sbjct: 125 KKPSPLSAAAAMMGKQRLSSMFTS-SVFKK-----SRDDKVKGL--SCDSIVDDVIAEFA 176
Query: 283 PDEADKEKRRRQRPAVLKPG 224
PDEAD+E+RRR + ++ G
Sbjct: 177 PDEADRERRRRGQSGLVSGG 196
>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
Length = 1561
Score = 69.3 bits (168), Expect = 9e-10
Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -2
Query: 460 RKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDK-KGLAFSADSILEDLLAEIT 284
+K S L+AAAA+MGKQ++SSMF S S +K +RDDK KGL S DSI++D++AE
Sbjct: 125 KKPSPLSAAAAMMGKQRLSSMFTS-SVFKK-----SRDDKVKGL--SCDSIVDDVIAEFA 176
Query: 283 PDEADKEKRRRQRPAVLKPG 224
PDEAD+E+RRR + ++ G
Sbjct: 177 PDEADRERRRRGQSGLVSGG 196
>emb|CBH32591.1| unnamed protein product [Triticum aestivum]
Length = 1016
Score = 67.8 bits (164), Expect = 3e-09
Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 16/173 (9%)
Frame = -2
Query: 472 PKVSRKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDKKGLAFSADSILEDLLA 293
P+ S +SL+AA A+ GK ++S+MF S+ + G+ D KG + +ADSI++D++A
Sbjct: 153 PQQSAAAASLSAAGAMTGKDRLSAMFTSSFFKKPGS-----DRTKGSSLAADSIVDDVIA 207
Query: 292 EITPDEADKEKRRRQRPAVLKPGP----------------ADVETRLSNGSQRCSLAARS 161
E PDE D+E+RRR+ V P P A++E R NG + ++
Sbjct: 208 EFAPDENDREERRRRVGRVSAPTPTPAPVAQIKAIQAAVHAEMEVRSDNGFEPDVVSGHG 267
Query: 160 FTRQLEGSTLSEIKQEASDTVLCNDSLLDLPVEIPNDVVPQHLASENKTVEEI 2
++E E+K + V L P P L ENK+ EE+
Sbjct: 268 NDMEVELQPEVELKPD----VEMQPKLEAAPGSSP------ELVDENKSSEEL 310
>emb|CBH32589.1| DNA polymerase alpha catalytic subunit,putative,expressed [Triticum
aestivum]
Length = 1516
Score = 67.0 bits (162), Expect = 4e-09
Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 16/173 (9%)
Frame = -2
Query: 472 PKVSRKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDKKGLAFSADSILEDLLA 293
P+ S +SL+AA A+ GK ++S+MF S+ + G+ D KG + +ADSI++D++A
Sbjct: 107 PQQSAAAASLSAAGAMTGKDRLSAMFTSSFFKKPGS-----DRTKGSSLAADSIVDDVIA 161
Query: 292 EITPDEADKEKRRRQRPAVLKPGP----------------ADVETRLSNGSQRCSLAARS 161
E PDE D+E+RRR+ V P P A++E R NG + ++
Sbjct: 162 EFAPDENDREERRRRVGRVSAPTPTPAPVAQIKAIQAAVHAEMEVRSDNGFEPDVVSDHG 221
Query: 160 FTRQLEGSTLSEIKQEASDTVLCNDSLLDLPVEIPNDVVPQHLASENKTVEEI 2
++E E+K + V L P P L ENK+ EE+
Sbjct: 222 NDMEVELQPEVELKPD----VEMQPKLEAAPGSSP------ELVDENKSSEEL 264
>tpg|DAA56645.1| TPA: hypothetical protein ZEAMMB73_505723 [Zea mays]
Length = 1528
Score = 66.2 bits (160), Expect = 8e-09
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = -2
Query: 472 PKVSRKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDKKGLAFSADSILEDLLA 293
P+ S K +SL+AAAA G+Q +SSMF S+ +G+ D K LA +ADSI++D++A
Sbjct: 130 PQQSAKVASLSAAAAKTGQQ-ISSMFTSSVFKGRGS-----DRAKNLALAADSIVDDVIA 183
Query: 292 EITPDEADKEKRRRQRPAVLKPGP 221
E PDE D+E+RRR+ V P P
Sbjct: 184 EFAPDENDREERRRRVARVCAPQP 207
>tpg|DAA56644.1| TPA: hypothetical protein ZEAMMB73_505723 [Zea mays]
Length = 1526
Score = 66.2 bits (160), Expect = 8e-09
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = -2
Query: 472 PKVSRKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDKKGLAFSADSILEDLLA 293
P+ S K +SL+AAAA G+Q +SSMF S+ +G+ D K LA +ADSI++D++A
Sbjct: 130 PQQSAKVASLSAAAAKTGQQ-ISSMFTSSVFKGRGS-----DRAKNLALAADSIVDDVIA 183
Query: 292 EITPDEADKEKRRRQRPAVLKPGP 221
E PDE D+E+RRR+ V P P
Sbjct: 184 EFAPDENDREERRRRVARVCAPQP 207
>ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
[Cucumis sativus]
Length = 498
Score = 65.9 bits (159), Expect = 1e-08
Identities = 38/69 (55%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = -2
Query: 454 TSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDK-KGLAFSADSILEDLLAEITPD 278
+SSL AAAA+MGKQK+SSMF S+ + G RDDK KGL DSI++D++AE PD
Sbjct: 128 SSSLTAAAAMMGKQKLSSMFTSSIFRKTG-----RDDKAKGLG--CDSIVDDVIAEFAPD 180
Query: 277 EADKEKRRR 251
E D+E+RR+
Sbjct: 181 ETDRERRRK 189
>ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Cucumis
sativus]
Length = 1547
Score = 65.9 bits (159), Expect = 1e-08
Identities = 38/69 (55%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = -2
Query: 454 TSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDK-KGLAFSADSILEDLLAEITPD 278
+SSL AAAA+MGKQK+SSMF S+ + G RDDK KGL DSI++D++AE PD
Sbjct: 128 SSSLTAAAAMMGKQKLSSMFTSSIFRKTG-----RDDKAKGLG--CDSIVDDVIAEFAPD 180
Query: 277 EADKEKRRR 251
E D+E+RR+
Sbjct: 181 ETDRERRRK 189
>ref|XP_001779378.1| predicted protein [Physcomitrella patens]
gi|162669176|gb|EDQ55768.1| predicted protein
[Physcomitrella patens]
Length = 281
Score = 64.7 bits (156), Expect = 2e-08
Identities = 33/79 (41%), Positives = 59/79 (74%)
Frame = -2
Query: 463 SRKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDKKGLAFSADSILEDLLAEIT 284
+RK ++L+AAA+L+GKQ+++SMF SAS + ++G D KG+ + +SIL+D+LA+++
Sbjct: 123 NRKAAALSAAASLIGKQRLASMFTSASGI--PSLGRRLRDDKGV--NTESILDDVLADVS 178
Query: 283 PDEADKEKRRRQRPAVLKP 227
D+ D+E+ +R+R A +P
Sbjct: 179 ADDVDREREKRRRRANFRP 197
>ref|XP_006847112.1| hypothetical protein AMTR_s00017p00221560 [Amborella trichopoda]
gi|548850141|gb|ERN08693.1| hypothetical protein
AMTR_s00017p00221560 [Amborella trichopoda]
Length = 1706
Score = 64.3 bits (155), Expect = 3e-08
Identities = 33/72 (45%), Positives = 50/72 (69%)
Frame = -2
Query: 463 SRKTSSLAAAAALMGKQKVSSMFASASSLRKGNVGGARDDKKGLAFSADSILEDLLAEIT 284
++++SS +AAAALMGKQ+++SMF S ++ GG R SA++I+ED+L E
Sbjct: 124 AKQSSSFSAAAALMGKQRLTSMFTSNVLKKREEKGGVR------GVSAEAIIEDVLMEFA 177
Query: 283 PDEADKEKRRRQ 248
PDE D+E+RRR+
Sbjct: 178 PDETDRERRRRR 189