BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00029744
         (405 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006472850.1| PREDICTED: DNA topoisomerase 2-binding prote...    79   5e-13
ref|XP_006472849.1| PREDICTED: DNA topoisomerase 2-binding prote...    79   5e-13
gb|EOY16438.1| Topbp1, putative isoform 5 [Theobroma cacao]            78   1e-12
gb|EOY16437.1| Topbp1, putative isoform 4 [Theobroma cacao]            78   1e-12
gb|EOY16436.1| Topbp1, putative isoform 3 [Theobroma cacao]            78   1e-12
gb|EOY16435.1| Topbp1, putative isoform 2 [Theobroma cacao]            78   1e-12
gb|EOY16434.1| Topbp1, putative isoform 1 [Theobroma cacao]            78   1e-12
ref|XP_006300682.1| hypothetical protein CARUB_v10019723mg [Caps...    75   1e-11
emb|CAD54082.1| MEI1 protein [Arabidopsis thaliana]                    74   2e-11
ref|NP_177856.2| meiosis defective 1 [Arabidopsis thaliana] gi|3...    74   2e-11
ref|XP_006434285.1| hypothetical protein CICLE_v10000159mg [Citr...    73   3e-11
ref|XP_006390100.1| hypothetical protein EUTSA_v10018076mg [Eutr...    73   4e-11
ref|XP_004498430.1| PREDICTED: DNA topoisomerase 2-binding prote...    72   7e-11
ref|XP_006345369.1| PREDICTED: DNA topoisomerase 2-binding prote...    72   1e-10
ref|XP_006598813.1| PREDICTED: DNA topoisomerase 2-binding prote...    70   4e-10
ref|XP_006598812.1| PREDICTED: DNA topoisomerase 2-binding prote...    70   4e-10
ref|XP_006598810.1| PREDICTED: DNA topoisomerase 2-binding prote...    70   4e-10
ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...    70   4e-10
gb|ESW29536.1| hypothetical protein PHAVU_002G0782001g, partial ...    69   5e-10
gb|ESW29535.1| hypothetical protein PHAVU_002G0782001g, partial ...    69   5e-10

>ref|XP_006472850.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like isoform X2
           [Citrus sinensis]
          Length = 1005

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 35/68 (51%), Positives = 49/68 (72%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSVLSTVPRKG 225
           CTHL+C+  EG+K+ VA+ W HI I+N KW  QS+  +AC+NEE Y VQ S +S+  +K 
Sbjct: 224 CTHLICDTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDSSVSS--KKT 281

Query: 224 SMGNLSKQ 201
            MG+L+KQ
Sbjct: 282 VMGSLTKQ 289


>ref|XP_006472849.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like isoform X1
           [Citrus sinensis]
          Length = 1008

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 35/68 (51%), Positives = 49/68 (72%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSVLSTVPRKG 225
           CTHL+C+  EG+K+ VA+ W HI I+N KW  QS+  +AC+NEE Y VQ S +S+  +K 
Sbjct: 224 CTHLICDTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDSSVSS--KKT 281

Query: 224 SMGNLSKQ 201
            MG+L+KQ
Sbjct: 282 VMGSLTKQ 289


>gb|EOY16438.1| Topbp1, putative isoform 5 [Theobroma cacao]
          Length = 894

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 36/68 (52%), Positives = 45/68 (66%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSVLSTVPRKG 225
           CTHL+C+  EG+KY VAR W H+ IV  KW  QSI  +AC+NEE YPVQ    S+  +K 
Sbjct: 226 CTHLICDAPEGDKYKVARRWGHVHIVVRKWFDQSIARRACLNEESYPVQGGCSSS--KKN 283

Query: 224 SMGNLSKQ 201
             G+LS Q
Sbjct: 284 VSGSLSTQ 291


>gb|EOY16437.1| Topbp1, putative isoform 4 [Theobroma cacao]
          Length = 971

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 36/68 (52%), Positives = 45/68 (66%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSVLSTVPRKG 225
           CTHL+C+  EG+KY VAR W H+ IV  KW  QSI  +AC+NEE YPVQ    S+  +K 
Sbjct: 226 CTHLICDAPEGDKYKVARRWGHVHIVVRKWFDQSIARRACLNEESYPVQGGCSSS--KKN 283

Query: 224 SMGNLSKQ 201
             G+LS Q
Sbjct: 284 VSGSLSTQ 291


>gb|EOY16436.1| Topbp1, putative isoform 3 [Theobroma cacao]
          Length = 929

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 36/68 (52%), Positives = 45/68 (66%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSVLSTVPRKG 225
           CTHL+C+  EG+KY VAR W H+ IV  KW  QSI  +AC+NEE YPVQ    S+  +K 
Sbjct: 226 CTHLICDAPEGDKYKVARRWGHVHIVVRKWFDQSIARRACLNEESYPVQGGCSSS--KKN 283

Query: 224 SMGNLSKQ 201
             G+LS Q
Sbjct: 284 VSGSLSTQ 291


>gb|EOY16435.1| Topbp1, putative isoform 2 [Theobroma cacao]
          Length = 980

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 36/68 (52%), Positives = 45/68 (66%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSVLSTVPRKG 225
           CTHL+C+  EG+KY VAR W H+ IV  KW  QSI  +AC+NEE YPVQ    S+  +K 
Sbjct: 226 CTHLICDAPEGDKYKVARRWGHVHIVVRKWFDQSIARRACLNEESYPVQGGCSSS--KKN 283

Query: 224 SMGNLSKQ 201
             G+LS Q
Sbjct: 284 VSGSLSTQ 291


>gb|EOY16434.1| Topbp1, putative isoform 1 [Theobroma cacao]
          Length = 979

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 36/68 (52%), Positives = 45/68 (66%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSVLSTVPRKG 225
           CTHL+C+  EG+KY VAR W H+ IV  KW  QSI  +AC+NEE YPVQ    S+  +K 
Sbjct: 226 CTHLICDAPEGDKYKVARRWGHVHIVVRKWFDQSIARRACLNEESYPVQGGCSSS--KKN 283

Query: 224 SMGNLSKQ 201
             G+LS Q
Sbjct: 284 VSGSLSTQ 291


>ref|XP_006300682.1| hypothetical protein CARUB_v10019723mg [Capsella rubella]
           gi|482569392|gb|EOA33580.1| hypothetical protein
           CARUB_v10019723mg [Capsella rubella]
          Length = 980

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 31/52 (59%), Positives = 39/52 (75%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSV 249
           CTHL+ ++AEG+KY VAR W HI+IV  KW  QSI  K C+NEE +PV SS+
Sbjct: 224 CTHLIADVAEGDKYKVARKWGHIQIVTRKWFQQSIDRKVCLNEESFPVLSSI 275


>emb|CAD54082.1| MEI1 protein [Arabidopsis thaliana]
          Length = 972

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 41/94 (43%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSVLST--VPR 231
           CTHL+ + AEG+KY VAR W HI+IV  KW  QSI  K C+NEE YPV  S+  T  V  
Sbjct: 222 CTHLIADAAEGDKYKVARKWGHIQIVTRKWFQQSIDKKVCLNEESYPVLGSIPLTRGVRD 281

Query: 230 KGSMGNLSKQAKECTES-----MMCSNIEDSMLQ 144
            G    L K     T S     + C+   DS ++
Sbjct: 282 LGVHNGLEKFPSAATASAADSYVSCAQSRDSDIE 315


>ref|NP_177856.2| meiosis defective 1 [Arabidopsis thaliana]
           gi|332197842|gb|AEE35963.1| meiosis defective 1
           [Arabidopsis thaliana]
          Length = 972

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 41/94 (43%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSVLST--VPR 231
           CTHL+ + AEG+KY VAR W HI+IV  KW  QSI  K C+NEE YPV  S+  T  V  
Sbjct: 222 CTHLIADAAEGDKYKVARKWGHIQIVTRKWFQQSIDKKVCLNEESYPVLGSIPLTRGVRD 281

Query: 230 KGSMGNLSKQAKECTES-----MMCSNIEDSMLQ 144
            G    L K     T S     + C+   DS ++
Sbjct: 282 LGVHNGLEKFPSAATASAADSYVSCAQSRDSDIE 315


>ref|XP_006434285.1| hypothetical protein CICLE_v10000159mg [Citrus clementina]
           gi|557536407|gb|ESR47525.1| hypothetical protein
           CICLE_v10000159mg [Citrus clementina]
          Length = 979

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 12/80 (15%)
 Frame = -2

Query: 404 CTHLLCNIA------------EGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPV 261
           CTHL+C+I+            EG+K+ VA+ W HI I+N KW  QS+  +AC+NEE Y V
Sbjct: 253 CTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTV 312

Query: 260 QSSVLSTVPRKGSMGNLSKQ 201
           Q S +S+  +K  MG+L+KQ
Sbjct: 313 QDSSVSS--KKTVMGSLTKQ 330


>ref|XP_006390100.1| hypothetical protein EUTSA_v10018076mg [Eutrema salsugineum]
           gi|557086534|gb|ESQ27386.1| hypothetical protein
           EUTSA_v10018076mg [Eutrema salsugineum]
          Length = 972

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 31/52 (59%), Positives = 37/52 (71%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSV 249
           CTHL+ + AEG+KY VAR W HI+IV  KW  QSI  K C+NEE YPV  S+
Sbjct: 222 CTHLIADAAEGDKYKVARKWGHIQIVTRKWFQQSIARKVCLNEESYPVLGSM 273


>ref|XP_004498430.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Cicer
           arietinum]
          Length = 931

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 31/55 (56%), Positives = 39/55 (70%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSVLST 240
           CTHL+ +  EG+KY VA+ W HI IV  KW  QSI  +AC+NEE YPVQ+  LS+
Sbjct: 172 CTHLISDAPEGDKYKVAKRWGHIHIVTMKWFDQSIARRACLNEESYPVQNGSLSS 226


>ref|XP_006345369.1| PREDICTED: DNA topoisomerase 2-binding protein 1-like [Solanum
           tuberosum]
          Length = 990

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQ--SSVLSTVPR 231
           C+HL+C++ EG+K+ VA+ W  I  V ++W  QS+  +AC+NEE YPVQ  S+ LSTV  
Sbjct: 224 CSHLICDVPEGDKFKVAKRWGCIHTVTKRWFEQSVARRACLNEESYPVQAGSNTLSTVRM 283

Query: 230 ----------KGSMGNLSKQAKECTESMMCSNIEDSMLQ 144
                     +   G  S       E + CS + DS L+
Sbjct: 284 TNQHSLEKGIRNLQGLSSLATASSAEPVFCSRVADSDLE 322


>ref|XP_006598813.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like isoform X5
           [Glycine max]
          Length = 929

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSVLST--VPR 231
           CTHL+    EG+KY VA+ W HI IV  KW  QSI  KAC+NEEL+ VQ   +S+  V R
Sbjct: 224 CTHLISEAPEGDKYKVAKRWGHIHIVTRKWFDQSIARKACLNEELFAVQHGSVSSHKVTR 283

Query: 230 KGSMGNLSKQAKECTESMMCSNIEDSMLQ 144
             +M +  ++      S   S   DS +Q
Sbjct: 284 DLTMQHSQEKDFGKLHSAASSGATDSNVQ 312


>ref|XP_006598812.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like isoform X4
           [Glycine max]
          Length = 933

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSVLST--VPR 231
           CTHL+    EG+KY VA+ W HI IV  KW  QSI  KAC+NEEL+ VQ   +S+  V R
Sbjct: 224 CTHLISEAPEGDKYKVAKRWGHIHIVTRKWFDQSIARKACLNEELFAVQHGSVSSHKVTR 283

Query: 230 KGSMGNLSKQAKECTESMMCSNIEDSMLQ 144
             +M +  ++      S   S   DS +Q
Sbjct: 284 DLTMQHSQEKDFGKLHSAASSGATDSNVQ 312


>ref|XP_006598810.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like isoform X2
           [Glycine max] gi|571524384|ref|XP_006598811.1|
           PREDICTED: DNA topoisomerase 2-binding protein 1-A-like
           isoform X3 [Glycine max]
          Length = 994

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSVLST--VPR 231
           CTHL+    EG+KY VA+ W HI IV  KW  QSI  KAC+NEEL+ VQ   +S+  V R
Sbjct: 224 CTHLISEAPEGDKYKVAKRWGHIHIVTRKWFDQSIARKACLNEELFAVQHGSVSSHKVTR 283

Query: 230 KGSMGNLSKQAKECTESMMCSNIEDSMLQ 144
             +M +  ++      S   S   DS +Q
Sbjct: 284 DLTMQHSQEKDFGKLHSAASSGATDSNVQ 312


>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like isoform X1
           [Glycine max]
          Length = 970

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSVLST--VPR 231
           CTHL+    EG+KY VA+ W HI IV  KW  QSI  KAC+NEEL+ VQ   +S+  V R
Sbjct: 224 CTHLISEAPEGDKYKVAKRWGHIHIVTRKWFDQSIARKACLNEELFAVQHGSVSSHKVTR 283

Query: 230 KGSMGNLSKQAKECTESMMCSNIEDSMLQ 144
             +M +  ++      S   S   DS +Q
Sbjct: 284 DLTMQHSQEKDFGKLHSAASSGATDSNVQ 312


>gb|ESW29536.1| hypothetical protein PHAVU_002G0782001g, partial [Phaseolus
           vulgaris]
          Length = 810

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSVLST--VPR 231
           CTHL+    EG+KY VA+ W HI IV  KW  QSI  +AC+NEE +PVQ   +S+  V R
Sbjct: 73  CTHLISEAPEGDKYKVAKRWGHIHIVISKWFAQSIARRACLNEEFFPVQHGSVSSHKVSR 132

Query: 230 KGSMGNLSKQAKECTESMMCSNIEDSMLQ 144
              M +  ++     +S   S   DS +Q
Sbjct: 133 DLPMQHSQEKDIGKLQSAASSGATDSNVQ 161


>gb|ESW29535.1| hypothetical protein PHAVU_002G0782001g, partial [Phaseolus
           vulgaris]
          Length = 811

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = -2

Query: 404 CTHLLCNIAEGEKYMVARNWRHIKIVNEKWITQSITTKACMNEELYPVQSSVLST--VPR 231
           CTHL+    EG+KY VA+ W HI IV  KW  QSI  +AC+NEE +PVQ   +S+  V R
Sbjct: 73  CTHLISEAPEGDKYKVAKRWGHIHIVISKWFAQSIARRACLNEEFFPVQHGSVSSHKVSR 132

Query: 230 KGSMGNLSKQAKECTESMMCSNIEDSMLQ 144
              M +  ++     +S   S   DS +Q
Sbjct: 133 DLPMQHSQEKDIGKLQSAASSGATDSNVQ 161