BLASTX nr result

ID: Ephedra27_contig00029735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00029735
         (518 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23543.1| unknown [Picea sitchensis]                              86   5e-15
ref|XP_006837938.1| hypothetical protein AMTR_s00102p00031770 [A...    84   2e-14
gb|ABK26261.1| unknown [Picea sitchensis]                              65   7e-09

>gb|ABK23543.1| unknown [Picea sitchensis]
          Length = 204

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 50/130 (38%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
 Frame = -3

Query: 423 WAMAFLWYALMSVGGFFYHSVAHMPIFYALDIIGTACSSLSAIAGCLGYSFKGYRYAHVI 244
           W  AFLWY +M +GG F+H +   P FY +DIIGT C S+S I G +          +  
Sbjct: 18  WGFAFLWYGVMCLGGLFHHCIGPSPFFYKMDIIGTGCFSISIIPGSI--------LVNDT 69

Query: 243 NHAAALSYVVVAG----MAVLGPQWVKEALYLVPSAIAFPAAGWFLLKVNFCGD----GS 88
           + AA +  + + G     AV G Q V E LYLVP  +A  A  WFL +VN          
Sbjct: 70  SKAARILLLAIYGGVIFSAVFGSQAVLEVLYLVPMVLAAVAGVWFLWRVNTEASVRQTSE 129

Query: 87  EVRKGVRLWS 58
             RK +R WS
Sbjct: 130 ATRKRIRKWS 139


>ref|XP_006837938.1| hypothetical protein AMTR_s00102p00031770 [Amborella trichopoda]
           gi|548840353|gb|ERN00507.1| hypothetical protein
           AMTR_s00102p00031770 [Amborella trichopoda]
          Length = 296

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 45/107 (42%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
 Frame = -3

Query: 420 AMAFLWYALMSVGGFFYHSVAHMP-IFYALDIIGTACSSLSAIAGCLGYS--FKGYRYAH 250
           A A LWY LM +GGFF+HS  +   IFY  D+ GT CSS+S IA  LG        R   
Sbjct: 89  ANALLWYCLMCLGGFFHHSFFNKRNIFYCFDVFGTCCSSVSLIAAILGVDDRISSNRRNF 148

Query: 249 VINHAAALSYVVVAGMAVLGPQWVKEALYLVPSAIAFPAAGWFLLKV 109
           ++ +A A  +V+       GPQW +EALYL+P+ +A     W+L  V
Sbjct: 149 IVFYAMATIFVI------FGPQWAREALYLLPTTVALCVGSWYLAVV 189


>gb|ABK26261.1| unknown [Picea sitchensis]
          Length = 261

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 52/163 (31%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
 Frame = -3

Query: 516 AACGIGVVMGLCLGLKALKLQKTQTIT--WIWPWAMAFLWYALMSVGGFFYHSVAHMPIF 343
           AAC  G V+GL  G   L+   T++      + W  AFLWY +M +GG F+H        
Sbjct: 59  AACLCGCVLGLLSGGHMLRCAVTRSRRERGFFSWGFAFLWYGVMCLGGLFHH-------- 110

Query: 342 YALDIIGTACSSLSAIAGCLGYSFKGYRYAHVINHAAALSYVVVAG----MAVLGPQWVK 175
                    C S+S I G +          +  + AA +  + + G     AV G Q V 
Sbjct: 111 ---------CFSISIIPGSI--------LVNDTSKAARILLLAIYGGVIFSAVFGSQAVL 153

Query: 174 EALYLVPSAIAFPAAGWFLLKVNFCGD----GSEVRKGVRLWS 58
           E LYLVP  +A  A  WFL +VN            RK +R WS
Sbjct: 154 EVLYLVPMVLAAVAGVWFLWRVNTEASVRQTSEATRKRIRKWS 196


Top