BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00029733
         (675 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halle...   179   5e-43
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle...   179   9e-43
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   179   9e-43
gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halle...   178   1e-42
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle...   178   1e-42
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...   178   2e-42
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   178   2e-42
gb|AGH20669.1| reverse transcriptase, partial [Lepidium sativum]      177   2e-42
gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao]   177   3e-42
gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halle...   177   3e-42
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]      177   3e-42
gb|AGH20668.1| reverse transcriptase, partial [Arabis hirsuta]        177   3e-42
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle...   177   3e-42
gb|ABA99612.1| retrotransposon protein, putative, unclassified [...   177   3e-42
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi...   177   3e-42
emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]   177   3e-42
gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halle...   176   5e-42
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   176   5e-42
gb|EXB44219.1| ABC transporter C family member 9 [Morus notabilis]    176   6e-42
gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halle...   176   6e-42

>gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  179 bits (455), Expect = 5e-43
 Identities = 92/227 (40%), Positives = 144/227 (63%), Gaps = 3/227 (1%)
 Frame = -2

Query: 674 FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
           ++Q+ GIDY E F+P  +++T+  +I+LAA N  ++  +D+KSAFL G   EE+Y++QP+
Sbjct: 68  YSQRTGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDFEEEVYIEQPQ 127

Query: 494 GFIQN--PNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
           G+I     NKV +L KALYGLKQAPRAW  +++K+  +K  IK   +  L YI+  K+  
Sbjct: 128 GYIVKGEENKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHAL-YIKIQKDDI 186

Query: 320 ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
           ++   +VDD+  TGNN +   +FK E+ + FE+TD+G   YYLGI++ Q+ + + + QE 
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEG 246

Query: 140 YIKKILHNFNPNKGRGRKTPLNPGYNSLKDEENK-IDSEKFKSLIKS 3
           Y K++L  F  +      TP+  G    K+EE + +D   FKSL+ S
Sbjct: 247 YAKEVLKRFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFKSLVGS 293


>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  179 bits (453), Expect = 9e-43
 Identities = 91/227 (40%), Positives = 145/227 (63%), Gaps = 3/227 (1%)
 Frame = -2

Query: 674 FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
           ++Q+ GIDY E F+P  +++T+  +I+LAA N  ++  +D+KSAFL G + EE+Y++QP+
Sbjct: 68  YSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 127

Query: 494 GFIQN--PNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
           G+I     +KV +L KALYGLKQAPRAW  +++K+  +K  IK   +  L YI+  K+  
Sbjct: 128 GYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHAL-YIKIQKDDI 186

Query: 320 ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
           ++   +VDD+  TGNN +   +FK E+ + FE+TD+G   YYLGI++ Q+ + + + QE 
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNRIFITQEG 246

Query: 140 YIKKILHNFNPNKGRGRKTPLNPGYNSLKDEENK-IDSEKFKSLIKS 3
           Y K++L  F  +      TP+  G    K+EE + +D   FKSL+ S
Sbjct: 247 YAKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFKSLVGS 293


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score =  179 bits (453), Expect = 9e-43
 Identities = 93/227 (40%), Positives = 144/227 (63%), Gaps = 3/227 (1%)
 Frame = -2

Query: 674  FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
            F QK GIDY ET++P  +++TI T+IALAA    +++ LD+KSAFL G + EEIY++QP+
Sbjct: 915  FKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPE 974

Query: 494  GF-IQ-NPNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
            GF +Q   NKV +L KALYGLKQAPRAWY +++K+ + KG  KS ++P L Y+ +     
Sbjct: 975  GFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPTL-YVNKTGTDI 1033

Query: 320  ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
            ++ + +VDD+  TGN+   M  FK ++   +E++DLG   Y+LG+++ Q  + + + Q  
Sbjct: 1034 LIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFISQRK 1093

Query: 140  YIKKILHNFNPNKGRGRKTPLNPG-YNSLKDEENKIDSEKFKSLIKS 3
            Y + IL  F  +  +   TPL P      +D  +K D   ++SL+ S
Sbjct: 1094 YAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKADPTIYRSLVGS 1140


>gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  178 bits (452), Expect = 1e-42
 Identities = 90/227 (39%), Positives = 145/227 (63%), Gaps = 3/227 (1%)
 Frame = -2

Query: 674 FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
           ++Q+ GIDY E F+P  +++T+  +I+LAA N  ++  +D+KS FL G + EE+Y++QP+
Sbjct: 68  YSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSTFLNGDLEEEVYIEQPQ 127

Query: 494 GFIQN--PNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
           G+I     +KV +L KALYGLKQAPRAW  +++K+  +K  IK   +  L YI+  K+  
Sbjct: 128 GYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHAL-YIKIQKDDI 186

Query: 320 ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
           ++   +VDD+  TGNN +   +FK E+ + FE+TD+G   YYLGI++ Q+ + + + QE 
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEG 246

Query: 140 YIKKILHNFNPNKGRGRKTPLNPGYNSLKDEENK-IDSEKFKSLIKS 3
           Y K+++  F  +      TP+  G   LK+EE + +D   FKSL+ S
Sbjct: 247 YAKEVIKKFKMDDSNPVTTPMECGIKLLKNEEGEGVDPTTFKSLVGS 293


>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera] gi|389595484|gb|AFK88545.1| reverse
           transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  178 bits (452), Expect = 1e-42
 Identities = 91/227 (40%), Positives = 145/227 (63%), Gaps = 3/227 (1%)
 Frame = -2

Query: 674 FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
           ++Q+ GIDY E F+P  +++T+  +I+LAA N  ++  +D+KSAFL G + EE+Y++QP+
Sbjct: 68  YSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 127

Query: 494 GFIQN--PNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
           G+I     +KV +L KALYGLKQAPRAW  +++K+  +K  IK   +  L YI+  K+  
Sbjct: 128 GYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHAL-YIKIQKDDI 186

Query: 320 ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
           ++   +VDD+  TGNN +   +FK E+ + FE+TD+G   YYLGI++ Q+ + + + QE 
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEG 246

Query: 140 YIKKILHNFNPNKGRGRKTPLNPGYNSLKDEENK-IDSEKFKSLIKS 3
           Y K++L  F  +      TP+  G    K+EE + +D   FKSL+ S
Sbjct: 247 YAKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFKSLVGS 293


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  178 bits (451), Expect = 2e-42
 Identities = 92/227 (40%), Positives = 144/227 (63%), Gaps = 3/227 (1%)
 Frame = -2

Query: 674  FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
            F QK GIDY ET++P  +++TI T+IALAA    +++ LD+KSAFL G + EEIY++QP+
Sbjct: 705  FKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPE 764

Query: 494  GF-IQ-NPNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
            GF +Q   NKV +L KALYGLKQAPR WY +++K+ + KG  KS ++P L Y+ +     
Sbjct: 765  GFSVQGGENKVFRLKKALYGLKQAPRVWYSQIDKYFIQKGFAKSISEPTL-YVNKTGTDI 823

Query: 320  ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
            ++ + +VDD+  TGN+   M  FK ++   +E++DLG   Y+LG+++ Q  + + + Q  
Sbjct: 824  LIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGLLYYFLGMEVHQSDEGIFISQRK 883

Query: 140  YIKKILHNFNPNKGRGRKTPLNPG-YNSLKDEENKIDSEKFKSLIKS 3
            Y + IL  F  +  +   TPL P      +D  +K+D   ++SL+ S
Sbjct: 884  YAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKVDPTIYRSLVGS 930


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  178 bits (451), Expect = 2e-42
 Identities = 89/225 (39%), Positives = 145/225 (64%), Gaps = 3/225 (1%)
 Frame = -2

Query: 674  FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
            ++Q+ G D+ ETF+P  ++ TI T+IA+AA     L+ LDIKSAFL GK+  EIY++QP+
Sbjct: 978  YSQQPGXDFHETFAPVARLDTIRTIIAVAAQKGWLLYQLDIKSAFLNGKLEXEIYVEQPQ 1037

Query: 494  GFIQN--PNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
            GF+ +   NKV KL KALYGLKQAPRAWY +++ + ++ G I+S ++P L+   +D +  
Sbjct: 1038 GFVVDGEENKVYKLKKALYGLKQAPRAWYTQIDSYFIENGFIRSKSEPTLYVKSKDNSQI 1097

Query: 320  ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
            ++ A +VDD+  TGN+   + +F+ E+ + +E++D+G   Y+LGI++ Q+ D + + Q+ 
Sbjct: 1098 LIVALYVDDLIFTGNDEKMVEKFRNEMMKKYEMSDMGLLHYFLGIEVYQEEDGVFICQKR 1157

Query: 140  YIKKILHNFNPNKGRGRKTPLNPGYNSLKDEENK-IDSEKFKSLI 9
            Y++ IL  F         TPL       K++  K +D   F+SL+
Sbjct: 1158 YVEHILKKFGMAGCNXVSTPLVVNEKLRKEDGGKMVDETHFRSLV 1202


>gb|AGH20669.1| reverse transcriptase, partial [Lepidium sativum]
          Length = 315

 Score =  177 bits (450), Expect = 2e-42
 Identities = 95/227 (41%), Positives = 143/227 (62%), Gaps = 3/227 (1%)
 Frame = -2

Query: 674 FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
           ++Q+ GIDY E F+P  +++T+  +I+LAA N  ++  +D+KSAFL G ++EE+Y++QP+
Sbjct: 68  YSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWRIHQMDVKSAFLNGDLNEEVYIEQPQ 127

Query: 494 GFI--QNPNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
           GFI     +KV +L KALYGLKQAPRAW  ++EK+  +K  IK   +  L YI+   N  
Sbjct: 128 GFIIKGEEDKVLRLKKALYGLKQAPRAWNTRIEKYFKEKDFIKCPYEHAL-YIKTQNNDI 186

Query: 320 ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
           ++   +VDD+  TGNN +   +FK E+ + FE+T +G   YYLGI++ Q  D + + QEA
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEKFKMEMIKEFEMTYIGLMSYYLGIEVKQDDDGIFITQEA 246

Query: 140 YIKKILHNFNPNKGRGRKTPLNPGYNSLKDEENK-IDSEKFKSLIKS 3
           Y K++L  F  +      TP+  G    K EE + ID   FKSL+ S
Sbjct: 247 YAKEVLKKFKMDDSNPVCTPMECGTKLSKHEEGESIDPTIFKSLVGS 293


>gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao]
          Length = 1318

 Score =  177 bits (449), Expect = 3e-42
 Identities = 88/225 (39%), Positives = 142/225 (63%), Gaps = 3/225 (1%)
 Frame = -2

Query: 674  FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
            F+Q  G+D+ ETF+P  +  TI  L+ALA     +++H+D+KSAFL G ISE+IY++QP+
Sbjct: 875  FSQVHGVDFFETFAPVARHDTIRLLVALAGREKWRIWHMDVKSAFLNGTISEDIYVEQPE 934

Query: 494  GFIQN--PNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
            GF++    +KVCKLIKALYGLKQAPRAWY+K++ +L       S ++P L+         
Sbjct: 935  GFVEKGKEDKVCKLIKALYGLKQAPRAWYKKIDAYLRSNKFFCSESEPTLYVKSSLGKIQ 994

Query: 320  ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
            ++ + +VDD+ +TG N + +  F+ +++  F+++DLG   Y+LG++I Q+ D + LHQ+ 
Sbjct: 995  LIVSVYVDDLLITGPNKSDLNSFRNKMKSEFDMSDLGEMSYFLGLEIQQRSDFICLHQKK 1054

Query: 140  YIKKILHNFNPNKGRGRKTPLNPGYNSLKDE-ENKIDSEKFKSLI 9
            Y  ++L  F     +   TPL  G    KD+    +D  +++ LI
Sbjct: 1055 YAGELLKRFKMEGCKPVSTPLTTGTKLCKDDGSTLVDVTQYRKLI 1099


>gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  177 bits (449), Expect = 3e-42
 Identities = 90/227 (39%), Positives = 145/227 (63%), Gaps = 3/227 (1%)
 Frame = -2

Query: 674 FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
           ++Q+ GIDY E F+P  +++T+  +I+LAA N  ++  +D+KSAFL G + EE+Y++QP+
Sbjct: 68  YSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 127

Query: 494 GFIQN--PNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
           G+I     +KV +L KALYGLKQAPR+W  +++K+  +K  IK   +  L YI+  K+  
Sbjct: 128 GYIVKGEEDKVLRLKKALYGLKQAPRSWNTRIDKYFKEKDFIKCPYEHAL-YIKIQKDDI 186

Query: 320 ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
           ++   +VDD+  TGNN +   +FK E+ + FE+TD+G   YYLGI++ Q+ + + + QE 
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEG 246

Query: 140 YIKKILHNFNPNKGRGRKTPLNPGYNSLKDEENK-IDSEKFKSLIKS 3
           Y K++L  F  +      TP+  G    K+EE + +D   FKSL+ S
Sbjct: 247 YAKEVLKKFKVDDSNPVTTPIECGIKLSKNEEGEGVDPTTFKSLVGS 293


>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  177 bits (448), Expect = 3e-42
 Identities = 91/227 (40%), Positives = 143/227 (62%), Gaps = 3/227 (1%)
 Frame = -2

Query: 674 FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
           ++Q+ GIDY E F+P  +++T+  +I+LAA  + ++  +D+KSAFL G + EE+Y++QP+
Sbjct: 68  YSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSAFLNGDLEEEVYIEQPQ 127

Query: 494 GFIQN--PNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
           G+I     +KV +L KALYGLKQAPRAW  +++K+  +KG IK   +  L YI+   N  
Sbjct: 128 GYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFNEKGFIKCPYEHAL-YIKTQNNDI 186

Query: 320 ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
           ++   +VDD+  TGNN      FK E+ + FE+TD+G   YYLGI++ Q+ + + + QE 
Sbjct: 187 LIACLYVDDLIFTGNNPIMFEDFKKEMTKEFEMTDIGLMSYYLGIEVKQEENGIFITQEG 246

Query: 140 YIKKILHNFNPNKGRGRKTPLNPGYNSLKDEENK-IDSEKFKSLIKS 3
           Y K++L  F  +      TP+  G    K+EE + +D   FKSL+ S
Sbjct: 247 YAKEVLKKFKMDDSNPVCTPMECGVKLSKEEEGESVDPTLFKSLVGS 293


>gb|AGH20668.1| reverse transcriptase, partial [Arabis hirsuta]
          Length = 315

 Score =  177 bits (448), Expect = 3e-42
 Identities = 92/227 (40%), Positives = 141/227 (62%), Gaps = 3/227 (1%)
 Frame = -2

Query: 674 FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
           ++Q+ GIDY E F+P  +++TI  +I LAA NN ++  +D+KSAFL G + EE+Y++QP+
Sbjct: 68  YSQRAGIDYDEVFAPVARLETIRLIILLAAQNNWRIHQMDVKSAFLNGDLEEEVYIEQPQ 127

Query: 494 GFI--QNPNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
           G+I     NKV +L KALYGLKQAPRAW  +++K+  +K  IK   + +  YI+      
Sbjct: 128 GYIVEGEENKVLRLKKALYGLKQAPRAWNTRIDKYFKEKNFIKCPYE-HALYIKIQNGDI 186

Query: 320 ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
           ++   +VDD+  TGNN +   +FK  + + FE+TD+G   YYLGI++ Q+ + + + QE 
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKMMMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEG 246

Query: 140 YIKKILHNFNPNKGRGRKTPLNPGYNSLKDEENK-IDSEKFKSLIKS 3
           Y K+IL  F  +      TP+  G    K EE + +D   FKSL+ S
Sbjct: 247 YAKEILKKFKMDDSNPVSTPIECGAKLSKHEEGEGVDPTLFKSLVGS 293


>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  177 bits (448), Expect = 3e-42
 Identities = 91/227 (40%), Positives = 143/227 (62%), Gaps = 3/227 (1%)
 Frame = -2

Query: 674 FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
           ++Q+ GIDY E F+P  +++T+  +I+LAA N  ++  +D+KSAFL G + EE+Y++QP+
Sbjct: 68  YSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 127

Query: 494 GFIQN--PNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
           G+I     +KV +L KALYGLKQAPRAW  ++ K+   K  IK   +  L YI+  K+  
Sbjct: 128 GYIVKGEEDKVLRLKKALYGLKQAPRAWNTRINKYFKKKDFIKCPYEHAL-YIKIQKDDI 186

Query: 320 ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
           ++   +VDD+  TGNN +   +FK E+ + FE+TD+G   YYLGI++ Q+ + + + QE 
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFISQEG 246

Query: 140 YIKKILHNFNPNKGRGRKTPLNPGYNSLKDEENK-IDSEKFKSLIKS 3
           Y K++L  F  +      TP+  G    K+EE + +D   FKSL+ S
Sbjct: 247 YAKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFKSLVGS 293


>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1198

 Score =  177 bits (448), Expect = 3e-42
 Identities = 93/227 (40%), Positives = 143/227 (62%), Gaps = 3/227 (1%)
 Frame = -2

Query: 674  FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
            F QK GIDY ET++P  +++TI T+IALAA    +++ LD+KSAFL G + EEIY++QP+
Sbjct: 778  FKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPE 837

Query: 494  GF-IQ-NPNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
            GF +Q   NKV +L KALYGLKQAPRAWY +++K+ + KG  KS ++P L Y+ +     
Sbjct: 838  GFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPTL-YVNKTGTDI 896

Query: 320  ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
            ++ + +VDD+  TGN+   M  FK ++   +E++DLG   Y+LG+++ Q  + + + Q  
Sbjct: 897  LIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFISQRK 956

Query: 140  YIKKILHNFNPNKGRGRKTPLNPG-YNSLKDEENKIDSEKFKSLIKS 3
            Y K IL  F  +  +   TPL P      +   +K D   ++SL+ S
Sbjct: 957  YAKNILKKFKMDNCKSVTTPLLPNEKQKARYGADKADPTIYRSLVGS 1003


>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1499

 Score =  177 bits (448), Expect = 3e-42
 Identities = 87/203 (42%), Positives = 133/203 (65%), Gaps = 2/203 (0%)
 Frame = -2

Query: 674  FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
            F Q+ G+DY ETF+P ++  TI T++A+AA    +LF +D+KSAFL G + EE+Y++QP 
Sbjct: 910  FTQEYGVDYLETFAPVSRYDTIRTIMAIAAQQGWKLFQMDVKSAFLNGDLEEEVYIEQPP 969

Query: 494  GFIQNPN--KVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
            GFI+     KV KL KALYGLKQAPRAWY +++ + +  G  +S  D   FY+++     
Sbjct: 970  GFIEEKEEGKVLKLHKALYGLKQAPRAWYGRIDGYFIKNGFERSINDA-AFYVKKTSKEI 1028

Query: 320  ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
            ++ + +VDDI +TG+N  ++ +FK E++  FE+TDLG   Y+LG+++ Q  + + L QE 
Sbjct: 1029 LVVSLYVDDIIVTGSNVKEIERFKEEMKNEFEMTDLGELSYFLGMEVNQDDEGIFLSQEN 1088

Query: 140  YIKKILHNFNPNKGRGRKTPLNP 72
            Y KK+L  F   + +   TPL P
Sbjct: 1089 YAKKLLKKFGMQECKSVSTPLTP 1111


>emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]
          Length = 1084

 Score =  177 bits (448), Expect = 3e-42
 Identities = 87/227 (38%), Positives = 140/227 (61%), Gaps = 3/227 (1%)
 Frame = -2

Query: 674  FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
            + Q+ GIDY E F+P  +  TI  +IALAA N   ++ LD+KSAFL G+++E ++++QP+
Sbjct: 668  YAQQHGIDYTEVFAPVARWDTIRMVIALAARNGWSVYQLDVKSAFLHGELNEAVFIEQPQ 727

Query: 494  GFIQN--PNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
            G+ +    +KV KL KALYGLKQAPRAWY ++E + + +G  +   D  LF    D    
Sbjct: 728  GYEKKGEEHKVYKLKKALYGLKQAPRAWYSRIEAYFIKEGFERCSCDHTLFIKTGDGGKI 787

Query: 320  ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
            ++ + +VDD+  TGN+ +   +FK  ++  F++TDLG  +Y+LG+++ Q  + + + Q  
Sbjct: 788  LIVSLYVDDLIFTGNDESMFVKFKNSMKLEFDMTDLGKMKYFLGVEVLQNSEGIYISQRK 847

Query: 140  YIKKILHNFNPNKGRGRKTPLNPGYNSLKDEEN-KIDSEKFKSLIKS 3
            Y K++L  F   K    K P+ PG    K+E   K+D+ K+K L+ S
Sbjct: 848  YAKEVLERFGMEKSNSVKNPIVPGDRLTKNEGGVKVDATKYKQLVGS 894


>gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  176 bits (447), Expect = 5e-42
 Identities = 91/227 (40%), Positives = 144/227 (63%), Gaps = 3/227 (1%)
 Frame = -2

Query: 674 FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
           ++Q+ GIDY E F+   +++T+  +I+LAA N  ++  +D+KSAFL G + EE+Y++QP+
Sbjct: 68  YSQRAGIDYDEVFALVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 127

Query: 494 GFIQN--PNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
           G+I     NKV +L KALYGLKQAPRAW  +++K+  +K  IK   +  L YI+  K+  
Sbjct: 128 GYIVKGEENKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHAL-YIKIQKDDI 186

Query: 320 ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
           ++   +VDD+  TGNN +   +FK E+ + FE+TD+G   YYLGI++ Q+ + + + QE 
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEG 246

Query: 140 YIKKILHNFNPNKGRGRKTPLNPGYNSLKDEENK-IDSEKFKSLIKS 3
           Y K++L  F  +      TP+  G    K+EE + +D   FKSL+ S
Sbjct: 247 YAKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFKSLVGS 293


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  176 bits (447), Expect = 5e-42
 Identities = 91/227 (40%), Positives = 143/227 (62%), Gaps = 3/227 (1%)
 Frame = -2

Query: 674  FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
            ++Q+ GIDY E F+P  +++T+  +I+LAA N  ++  +D+KSAFL G + EE+Y++QP+
Sbjct: 875  YSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 934

Query: 494  GFIQN--PNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
            G+I     +KV +L KALYGLKQAPRAW  +++K+  +K  IK   +  L YI+  K   
Sbjct: 935  GYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHAL-YIKIQKEDI 993

Query: 320  ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
            ++   +VDD+  TGNN +   +FK E+ + FE+TD+G   YYLGI++ Q+ + + + QE 
Sbjct: 994  LIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEG 1053

Query: 140  YIKKILHNFNPNKGRGRKTPLNPGYNSLKDEENK-IDSEKFKSLIKS 3
            Y K++L  F  +      TP+  G    K EE + +D   FKSL+ S
Sbjct: 1054 YAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGS 1100


>gb|EXB44219.1| ABC transporter C family member 9 [Morus notabilis]
          Length = 2077

 Score =  176 bits (446), Expect = 6e-42
 Identities = 93/227 (40%), Positives = 147/227 (64%), Gaps = 5/227 (2%)
 Frame = -2

Query: 674  FNQKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPK 495
            ++Q+ G+D+ +TF+P  +  TI  LIAL A    ++F LD+KSAFL G + EEI+++QP 
Sbjct: 996  YSQQFGVDFSDTFAPVARHDTIRLLIALVAQKGWKIFQLDVKSAFLNGYLKEEIFVEQPP 1055

Query: 494  GFIQ--NPNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHH 321
             F++  N +KV +L KALYGLKQAPRAWY +++ HLL  G  +S ++  L Y+++  +  
Sbjct: 1056 CFLKKGNEDKVYQLKKALYGLKQAPRAWYSRIDDHLLQLGFKRSPSEATL-YVQQAGDDL 1114

Query: 320  ILTAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEA 141
            ++ + +VDD+ +TG+N T + +FK E++ +FE+TDLG   Y+LG++I Q    + + QE 
Sbjct: 1115 LIISLYVDDLLITGSNITLVQKFKKEMQNVFEMTDLGEMSYFLGMKILQTEQGIFISQEK 1174

Query: 140  YIKKILHNFNPNKGRGRKTPLNPGYN---SLKDEENKIDSEKFKSLI 9
            Y K +L  F     +   TPL  G N   S +D  +KID+  ++SLI
Sbjct: 1175 YAKDVLKKFGMENCKDVSTPL--GLNEKLSKEDGSDKIDAGIYRSLI 1219


>gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  176 bits (446), Expect = 6e-42
 Identities = 91/225 (40%), Positives = 143/225 (63%), Gaps = 3/225 (1%)
 Frame = -2

Query: 668 QKVGIDYKETFSPNTKIKTIMTLIALAAHNN*QLFHLDIKSAFLRGKISEEIYMKQPKGF 489
           Q+ GIDY E F+P  +++T+  +I+LAA N  ++  +D+KSAFL G + EE+Y++QP+G+
Sbjct: 70  QRAGIDYDEVFAPIARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGY 129

Query: 488 IQN--PNKVCKLIKALYGLKQAPRAWYEKLEKHLLDKGLIKSGADPNLFYIEEDKNHHIL 315
           I     +KV +L KALYGLKQAPRAW  +++K+  +K  IK   +  L YI+  K+  ++
Sbjct: 130 IVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHAL-YIKIQKDDILI 188

Query: 314 TAFHVDDIFLTGNNTTKMFQFKTELEEIFEVTDLGNARYYLGIQICQKGDTLLLHQEAYI 135
              +VDD+  TGNN +   +FK E+ + FE+TD+G   YYLGI++ Q+ + + + QE Y 
Sbjct: 189 ACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYA 248

Query: 134 KKILHNFNPNKGRGRKTPLNPGYNSLKDEENK-IDSEKFKSLIKS 3
           K++L  F  +      TP+  G    K+EE + +D   FKSL+ S
Sbjct: 249 KEVLKKFKMDDSNPVTTPMEYGIKLSKNEEGEGVDPTTFKSLVGS 293