BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00029556
         (415 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_188975.3| pentatricopeptide repeat-containing protein [Ar...   127   2e-27
ref|XP_002883423.1| pentatricopeptide repeat-containing protein ...   124   2e-26
ref|XP_006297059.1| hypothetical protein CARUB_v10013060mg [Caps...   120   2e-25
ref|XP_006406039.1| hypothetical protein EUTSA_v10020184mg [Eutr...   119   4e-25
ref|XP_004296377.1| PREDICTED: putative pentatricopeptide repeat...   118   9e-25
gb|EMJ26204.1| hypothetical protein PRUPE_ppa020300mg [Prunus pe...   114   1e-23
gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]        112   4e-23
ref|XP_002533488.1| pentatricopeptide repeat-containing protein,...   112   5e-23
ref|XP_006354473.1| PREDICTED: putative pentatricopeptide repeat...   112   7e-23
ref|XP_006356287.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_006348495.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
gb|EOY10376.1| Tetratricopeptide repeat (TPR)-like superfamily p...   110   2e-22
ref|XP_004228900.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   110   2e-22
ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat...   110   2e-22
gb|EXC74564.1| hypothetical protein L484_000327 [Morus notabilis]     110   3e-22
gb|EXC01816.1| hypothetical protein L484_021456 [Morus notabilis]     110   3e-22
ref|XP_004976211.1| PREDICTED: putative pentatricopeptide repeat...   110   3e-22
ref|XP_004247740.1| PREDICTED: putative pentatricopeptide repeat...   109   3e-22
dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]                      109   3e-22

>ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g23330 gi|11994318|dbj|BAB02277.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332643232|gb|AEE76753.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  127 bits (318), Expect = 2e-27
 Identities = 58/140 (41%), Positives = 93/140 (66%), Gaps = 3/140 (2%)
 Frame = +2

Query: 5   AGVLPAFR---DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTF 175
           + VLP F    D+ KG E+H  +I+KG  S++Y+ S+L++MYA+   +E + + F  +  
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305

Query: 176 KDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGI 355
           +D +SWN+L+A YVQ   Y  A  +F+ MV  +VKP +  F+ ++ ACA LA+LH G  +
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365

Query: 356 HGYVMKGGFISDVYVGSGLV 415
           HGYV++GGF S++++ S LV
Sbjct: 366 HGYVLRGGFGSNIFIASALV 385



 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 43/127 (33%), Positives = 74/127 (58%), Gaps = 3/127 (2%)
 Frame = +2

Query: 2   FAGVLPAFRDLSK---GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           F+ V+PA   L+    G +LH  +++ GFGS +++ASAL++MY++CGN+++ RK F+ M 
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLG 352
             D +SW A+I  +        A ++F++M R  VKP    F  +L+AC+ +  +    G
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG 465

Query: 353 IHGYVMK 373
               + K
Sbjct: 466 YFNSMTK 472



 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 36/165 (21%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARC---------GN--------------- 136
           DL  G  +H  I++ G   ++Y  +ALM MYA+          GN               
Sbjct: 120 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 179

Query: 137 ------------LESTRKTFEEMTFKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVK 280
                       ++S R+ FE M  KD +S+N +IA Y Q   YE+A  + ++M   ++K
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK 239

Query: 281 PISNTFAVLLSACARLASLHNGLGIHGYVMKGGFISDVYVGSGLV 415
           P S T + +L   +    +  G  IHGYV++ G  SDVY+GS LV
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284


>ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329263|gb|EFH59682.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 679

 Score =  124 bits (310), Expect = 2e-26
 Identities = 56/140 (40%), Positives = 93/140 (66%), Gaps = 3/140 (2%)
 Frame = +2

Query: 5   AGVLPAFR---DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTF 175
           + VLP F    D+ KG E+H  +I+KG  S++Y+ S+L++MYA+   +E + + F  +  
Sbjct: 210 SSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYR 269

Query: 176 KDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGI 355
           +D++SWN+L+A YVQ   Y  A  +F+ MV  +V+P +  F+ ++ ACA LA+LH G  +
Sbjct: 270 RDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQL 329

Query: 356 HGYVMKGGFISDVYVGSGLV 415
           HGYV++GGF  ++++ S LV
Sbjct: 330 HGYVLRGGFGRNIFIASALV 349



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 49/129 (37%), Positives = 76/129 (58%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIA 208
           DL  G  +H  I++ G   ++Y  +ALM MY++   ++S RK FE M  KD +S+N +IA
Sbjct: 120 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIA 179

Query: 209 AYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFIS 388
            Y Q   YE+A  + ++M   ++KP + T + +L   +    +  G  IHGYV++ G  S
Sbjct: 180 GYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDS 239

Query: 389 DVYVGSGLV 415
           DVY+GS LV
Sbjct: 240 DVYIGSSLV 248



 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
 Frame = +2

Query: 2   FAGVLPAFRDLSK---GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           F+ V+PA   L+    G +LH  +++ GFG  +++ASAL++MY++CGN+++ RK F+ M 
Sbjct: 310 FSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMN 369

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLG 352
             D +SW A+I  +        A ++F++M R  VKP    F  +L+AC+ +  +    G
Sbjct: 370 LHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG 429

Query: 353 IHGYVMK 373
               + K
Sbjct: 430 YFNSMTK 436


>ref|XP_006297059.1| hypothetical protein CARUB_v10013060mg [Capsella rubella]
           gi|482565768|gb|EOA29957.1| hypothetical protein
           CARUB_v10013060mg [Capsella rubella]
          Length = 730

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/140 (39%), Positives = 91/140 (65%), Gaps = 3/140 (2%)
 Frame = +2

Query: 5   AGVLPAFR---DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTF 175
           + VLP F    D+ KG E+H   I+KG  +++Y+ S+L++MYA+   +E + + F  +  
Sbjct: 261 SSVLPIFSEYVDVIKGKEIHGYAIRKGIDADVYIGSSLVDMYAKSARIEDSERVFSHLAR 320

Query: 176 KDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGI 355
           +D++SWN+L+A YVQ   Y  A  +F+ MV  +V+P    F+ ++ ACA LA+L  G  +
Sbjct: 321 RDSISWNSLVAGYVQNGRYNEALRLFRQMVTTKVRPGPVAFSSVIPACAHLATLRLGKQL 380

Query: 356 HGYVMKGGFISDVYVGSGLV 415
           HGYV++GGF S++++ S LV
Sbjct: 381 HGYVLRGGFGSNIFISSSLV 400



 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
 Frame = +2

Query: 2   FAGVLPAFRDLSK---GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           F+ V+PA   L+    G +LH  +++ GFGS ++++S+L++MY++CGN+ + RK F+ M 
Sbjct: 361 FSSVIPACAHLATLRLGKQLHGYVLRGGFGSNIFISSSLVDMYSKCGNINAARKIFDRMN 420

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLG 352
             D +SW A+I  Y        A ++F++M    VKP    F  +L+AC+ +  +    G
Sbjct: 421 VHDEVSWTAIIMGYALHGHGHEAVSLFEEMKEQGVKPNKVAFVAVLTACSHVGLVDEAWG 480

Query: 353 IHGYVMK 373
               + K
Sbjct: 481 YFNSMTK 487



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 51/180 (28%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYA-----------------------RCGN- 136
           DL  G  +H  I++ G   ++Y  +ALM MYA                       R G+ 
Sbjct: 120 DLRLGESVHGCIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGKVFDEMPQRMSRLGSC 179

Query: 137 ---------------------------LESTRKTFEEMTFKDALSWNALIAAYVQIKDYE 235
                                      ++S RK FE +  KD +S+N +IA Y Q   YE
Sbjct: 180 CVATESVEPVMNCDEDLEAETCTMPLGIDSVRKVFEVIPRKDVVSYNTIIAGYAQSGMYE 239

Query: 236 NAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFISDVYVGSGLV 415
           +A  + ++M   ++KP + T + +L   +    +  G  IHGY ++ G  +DVY+GS LV
Sbjct: 240 DALRLVREMGTTDIKPDAFTLSSVLPIFSEYVDVIKGKEIHGYAIRKGIDADVYIGSSLV 299


>ref|XP_006406039.1| hypothetical protein EUTSA_v10020184mg [Eutrema salsugineum]
           gi|557107185|gb|ESQ47492.1| hypothetical protein
           EUTSA_v10020184mg [Eutrema salsugineum]
          Length = 694

 Score =  119 bits (298), Expect = 4e-25
 Identities = 53/140 (37%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
 Frame = +2

Query: 5   AGVLPAFR---DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTF 175
           + VLP F    D+ KG E+H  +I+KG  +++Y+ S+L++MYA+   +E + + F  ++ 
Sbjct: 235 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDADVYIGSSLVDMYAKSARIEDSERVFSHLSC 294

Query: 176 KDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGI 355
           +D++SWN+L+A YVQ   Y  A  +F+ MV  +V+P    F+ +L ACA L++L  G  +
Sbjct: 295 RDSISWNSLVAGYVQNGRYNEAVRLFRQMVNAKVRPGPVAFSSVLPACAHLSTLTLGKQL 354

Query: 356 HGYVMKGGFISDVYVGSGLV 415
           HGYV++GG+  ++++ S LV
Sbjct: 355 HGYVLRGGYSDNIFIASALV 374



 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 25/154 (16%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARC-------------------------G 133
           DL  G  +H  I++ G   ++Y  +ALM MYA+                           
Sbjct: 120 DLRLGESVHGCILRLGMDCDLYTCNALMNMYAKLLGMSSKISVGKVFDEMPQRNSISEDV 179

Query: 134 NLESTRKTFEEMTFKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLS 313
            ++S RK FE M  KD +SWN +IA Y Q   YENA  + ++M   ++ P + T + +L 
Sbjct: 180 GIDSVRKVFELMPRKDVVSWNTIIAGYAQSGMYENALRLVREMGSNDLSPDAFTLSSVLP 239

Query: 314 ACARLASLHNGLGIHGYVMKGGFISDVYVGSGLV 415
             +    +  G  IHGYV++ G  +DVY+GS LV
Sbjct: 240 IFSEYVDVIKGKEIHGYVIRKGIDADVYIGSSLV 273



 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 41/127 (32%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
 Frame = +2

Query: 2   FAGVLPAFRDLSK---GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           F+ VLPA   LS    G +LH  +++ G+   +++ASAL++MY++CGN+++ RK F+ M 
Sbjct: 335 FSSVLPACAHLSTLTLGKQLHGYVLRGGYSDNIFIASALVDMYSKCGNIKAARKIFDRMN 394

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLG 352
             D +SW A+I  +        A ++F++M    VKP    F  +L+AC+ +  +    G
Sbjct: 395 LHDEVSWTAIIMGHALHGHGREAISLFEEMKLQGVKPNHVAFVAVLTACSHVGLVEEAWG 454

Query: 353 IHGYVMK 373
               + K
Sbjct: 455 YFNSMSK 461


>ref|XP_004296377.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Fragaria vesca subsp. vesca]
          Length = 693

 Score =  118 bits (295), Expect = 9e-25
 Identities = 52/140 (37%), Positives = 91/140 (65%), Gaps = 3/140 (2%)
 Frame = +2

Query: 5   AGVLPAFR---DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTF 175
           + VLP F    D+ KG E+HA +++ GF +++++ S+L++MYA C  +E + K F+ +  
Sbjct: 224 SSVLPVFAEYVDVVKGKEIHAYVVRHGFDADVFIGSSLIDMYANCTRMEDSLKVFDLLRQ 283

Query: 176 KDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGI 355
            D++SWN++I   VQ   ++    +F+ M+R + KP   +F+ ++ ACA L +LH G  +
Sbjct: 284 GDSISWNSIIGGCVQNGMFDQGLVLFRRMLRAKTKPTDVSFSSIIPACAHLTTLHLGQQL 343

Query: 356 HGYVMKGGFISDVYVGSGLV 415
           HGY+++GGF  ++YV S LV
Sbjct: 344 HGYIIRGGFEDNIYVASSLV 363



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 14/143 (9%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARC--------------GNLESTRKTFEE 166
           DL  G  +HA +++ G   ++Y  +ALM MYA+                +  S +K F+ 
Sbjct: 120 DLRFGEAVHANVVRSGVDVDLYTCNALMNMYAKVERFHAHQVFDESPHSSQSSVKKVFDT 179

Query: 167 MTFKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNG 346
           M  +D +SWN +IA   Q   YE A A  ++M    +KP   T + +L   A    +  G
Sbjct: 180 MPRRDVVSWNTVIAGEAQNGMYEEALARVREMGSAGLKPDGFTLSSVLPVFAEYVDVVKG 239

Query: 347 LGIHGYVMKGGFISDVYVGSGLV 415
             IH YV++ GF +DV++GS L+
Sbjct: 240 KEIHAYVVRHGFDADVFIGSSLI 262



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
 Frame = +2

Query: 2   FAGVLPAFRDLSK---GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           F+ ++PA   L+    G +LH  II+ GF   +YVAS+L++MYA+CGN++  R  F++M 
Sbjct: 324 FSSIIPACAHLTTLHLGQQLHGYIIRGGFEDNIYVASSLVDMYAKCGNIKMARWIFDKME 383

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACA 322
             D +SW A+   Y       +A ++F+ M    VKP    F  +L+AC+
Sbjct: 384 HHDMVSWTAMTMGYALHGHAHDAISLFEQMKGESVKPNYVAFMAVLTACS 433


>gb|EMJ26204.1| hypothetical protein PRUPE_ppa020300mg [Prunus persica]
          Length = 671

 Score =  114 bits (285), Expect = 1e-23
 Identities = 52/140 (37%), Positives = 89/140 (63%), Gaps = 3/140 (2%)
 Frame = +2

Query: 5   AGVLPAFR---DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTF 175
           + VLP F    D+ KG E+H   I+ GF ++++V S+L++MYA C  ++ + + F  +  
Sbjct: 202 SSVLPVFAEYVDVIKGKEIHGYAIRHGFDADVFVGSSLIDMYANCNRIKDSLRVFNLLPK 261

Query: 176 KDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGI 355
           +DA+SWN++IA  VQ   ++     F+ M+  ++KP+  +F+  + ACA L +LH G  +
Sbjct: 262 RDAISWNSIIAGCVQNSMFDEGLIFFRQMLMGKIKPVPVSFSSTIPACAHLTTLHLGKQL 321

Query: 356 HGYVMKGGFISDVYVGSGLV 415
           HGY+++GGF  +V+V S LV
Sbjct: 322 HGYIIRGGFEDNVFVASSLV 341



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 45/130 (34%), Positives = 68/130 (52%)
 Frame = +2

Query: 26  RDLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALI 205
           +DL  G  +H  I++ G   ++Y  +ALM +          RK F+ M  +D +SWN +I
Sbjct: 120 KDLRFGESVHGCIVRFGMDCDLYTCNALMNI---------VRKVFDLMPKRDIVSWNTVI 170

Query: 206 AAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFI 385
           A   Q    E A A+ +DM    +KP S T + +L   A    +  G  IHGY ++ GF 
Sbjct: 171 AGNAQNGMCEEALAMVKDMGNANLKPDSFTLSSVLPVFAEYVDVIKGKEIHGYAIRHGFD 230

Query: 386 SDVYVGSGLV 415
           +DV+VGS L+
Sbjct: 231 ADVFVGSSLI 240



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 41/110 (37%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
 Frame = +2

Query: 2   FAGVLPAFRDLSK---GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           F+  +PA   L+    G +LH  II+ GF   ++VAS+L++MYA+CGN+   R  F++M 
Sbjct: 302 FSSTIPACAHLTTLHLGKQLHGYIIRGGFEDNVFVASSLVDMYAKCGNIRIARWIFDKME 361

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACA 322
             D +SW A+I  Y       +AF+ F+ M    VKP   +F  +L+AC+
Sbjct: 362 QHDMVSWTAMIMGYALHGHAPDAFSSFEQMEGEAVKPNYVSFMAVLTACS 411


>gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  112 bits (281), Expect = 4e-23
 Identities = 49/129 (37%), Positives = 85/129 (65%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIA 208
           D+SKG E+H   I++G  +E+YVAS+L++MYA+C  +  + + F  +T +D +SWN++IA
Sbjct: 315 DISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIA 374

Query: 209 AYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFIS 388
             VQ   ++     F+ M+  ++KP S +F+ ++ ACA L +LH G  +HGY+ + GF  
Sbjct: 375 GCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDE 434

Query: 389 DVYVGSGLV 415
           ++++ S LV
Sbjct: 435 NIFIASSLV 443



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
 Frame = +2

Query: 2   FAGVLPAFRDLSK---GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           F+ ++PA   L+    G +LH  I + GF   +++AS+L++MYA+CGN+ + R+ F+ M 
Sbjct: 404 FSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMR 463

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACA 322
            +D +SW A+I          +A  +F+ M    ++P    F  +L+AC+
Sbjct: 464 LRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACS 513



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/132 (28%), Positives = 65/132 (49%)
 Frame = +2

Query: 20  AFRDLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNA 199
           + +  S+  +LHA ++K    S +   S L+ +Y+    L  + + F  + F  AL+W +
Sbjct: 20  SIKSRSQAQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFPPALAWKS 78

Query: 200 LIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGG 379
           +I  Y        +   F  M+   + P  N F  +L ACA L  L+ G  +HGY+++ G
Sbjct: 79  VIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVG 138

Query: 380 FISDVYVGSGLV 415
              D+Y G+ L+
Sbjct: 139 LDFDLYTGNALM 150



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/94 (32%), Positives = 49/94 (52%)
 Frame = +2

Query: 134 NLESTRKTFEEMTFKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLS 313
           +++S RK FE M  KD +SWN +IA   +   Y     + ++M    +KP S T + +L 
Sbjct: 249 SVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLP 308

Query: 314 ACARLASLHNGLGIHGYVMKGGFISDVYVGSGLV 415
             A    +  G  IHG  ++ G  ++VYV S L+
Sbjct: 309 LIAENVDISKGKEIHGCSIRQGLDAEVYVASSLI 342


>ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526650|gb|EEF28892.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 939

 Score =  112 bits (280), Expect = 5e-23
 Identities = 54/128 (42%), Positives = 84/128 (65%)
 Frame = +2

Query: 32  LSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIAA 211
           L+ GME+H  IIK G G + +V  AL++MY +CG +E  +K  + +  +  +SWNA+IA 
Sbjct: 495 LNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAG 554

Query: 212 YVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFISD 391
           +  +K  E+A + F +M+++ VKP + T+A++L ACA LAS+  G  IHG ++K    SD
Sbjct: 555 FTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSD 614

Query: 392 VYVGSGLV 415
           VY+ S LV
Sbjct: 615 VYITSTLV 622



 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 44/125 (35%), Positives = 76/125 (60%)
 Frame = +2

Query: 41  GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIAAYVQ 220
           G +LH++ +K    S + VA+++++MY +C  L      F+EM  +DA+SWNA+IAA+ Q
Sbjct: 397 GRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQ 456

Query: 221 IKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFISDVYV 400
             + E    +F  M+RL ++P   T+  +L AC+   +L++G+ IH  ++K G   D +V
Sbjct: 457 NGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFV 516

Query: 401 GSGLV 415
           G  L+
Sbjct: 517 GGALI 521



 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 44/138 (31%), Positives = 81/138 (58%), Gaps = 3/138 (2%)
 Frame = +2

Query: 2   FAGVLPA---FRDLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           FA VL A     D   G+++H +I++ GF  ++   SAL++MYA+C  L+ + K F E+ 
Sbjct: 179 FAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIP 238

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLG 352
            K+ + W+A+IA  VQ  ++     +F++M ++ +    + +A +  +CA L++L  G  
Sbjct: 239 VKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQ 298

Query: 353 IHGYVMKGGFISDVYVGS 406
           +H + +K  F SD+ VG+
Sbjct: 299 LHAHALKCDFGSDITVGT 316



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
 Frame = +2

Query: 2   FAGVLPAFRDLSK---GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           +A VL A  +L+    G ++H  IIK    S++Y+ S L++MY++CGN++ +   FE+  
Sbjct: 583 YAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAP 642

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGL 349
            KD ++WNA+I  Y Q    E A   F+ M    V+P   TF  +L ACA +  +  GL
Sbjct: 643 NKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGL 701



 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 32/163 (19%)
 Frame = +2

Query: 23  FRDLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALS---- 190
           +  L  G + HA +I  GF  ++Y+++ LM+MY RC +L    K FE+M+ +D +S    
Sbjct: 56  YNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTM 115

Query: 191 ---------------------------WNALIAAYVQIKDYENAFAIFQDMVRLE-VKPI 286
                                      WN++++ ++Q  +   +  +F DM R E V   
Sbjct: 116 ISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFD 175

Query: 287 SNTFAVLLSACARLASLHNGLGIHGYVMKGGFISDVYVGSGLV 415
             TFAV+L AC+ L     G+ +HG +++ GF  DV  GS L+
Sbjct: 176 QTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALL 218



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/128 (26%), Positives = 65/128 (50%)
 Frame = +2

Query: 32  LSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIAA 211
           L  G +LHA  +K  FGS++ V +A ++MYA+CG+L   ++ F  +       +NA+I  
Sbjct: 293 LKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVG 352

Query: 212 YVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFISD 391
            V+ +    A   FQ +++  +     + +   SACA +    +G  +H   +K    S+
Sbjct: 353 CVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSN 412

Query: 392 VYVGSGLV 415
           + V + ++
Sbjct: 413 ICVANSIL 420


>ref|XP_006354473.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Solanum tuberosum]
          Length = 738

 Score =  112 bits (279), Expect = 7e-23
 Identities = 51/140 (36%), Positives = 86/140 (61%), Gaps = 3/140 (2%)
 Frame = +2

Query: 5   AGVLPAFR---DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTF 175
           + VLP F    D+ KG E+H   I+ GF  + ++ S+L++MYA C  +E + + F  ++ 
Sbjct: 270 SSVLPVFARHVDVLKGKEIHGYAIRHGFDKDEFIGSSLIDMYATCTRVEDSYRVFNLLSE 329

Query: 176 KDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGI 355
           KD +SWN++IA  VQ   ++    +F+ M+   VKP+  +F+ +L ACA L +LH G  +
Sbjct: 330 KDDVSWNSIIAGCVQNGTFDEGLGLFRQMLAANVKPVEVSFSAILPACAHLTTLHLGKQL 389

Query: 356 HGYVMKGGFISDVYVGSGLV 415
           H Y+++ GF  ++Y+ S LV
Sbjct: 390 HAYIIRVGFAQNMYIASSLV 409



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
 Frame = +2

Query: 2   FAGVLPAFRDLSK---GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           F+ +LPA   L+    G +LHA II+ GF   MY+AS+L++MYA+CG + + R  F++M 
Sbjct: 370 FSAILPACAHLTTLHLGKQLHAYIIRVGFAQNMYIASSLVDMYAKCGKIMTARWIFDKME 429

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNG 346
             D++SW A+I  Y        A  +F++M   ++KP +  +  +L+AC+    +  G
Sbjct: 430 IHDSVSWTAIIMGYALNGHAREATILFENMQHDKIKPNAVAYLAILTACSHAGLVDEG 487



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/93 (36%), Positives = 49/93 (52%)
 Frame = +2

Query: 137 LESTRKTFEEMTFKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSA 316
           L+S  K F+ M  KD +SWN +I   VQ   YE A    ++M    +KP   T + +L  
Sbjct: 216 LDSVSKIFQMMPDKDVVSWNTVIGGNVQSGLYEEALERLREMSNAYLKPDCFTLSSVLPV 275

Query: 317 CARLASLHNGLGIHGYVMKGGFISDVYVGSGLV 415
            AR   +  G  IHGY ++ GF  D ++GS L+
Sbjct: 276 FARHVDVLKGKEIHGYAIRHGFDKDEFIGSSLI 308



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/127 (25%), Positives = 63/127 (49%)
 Frame = +2

Query: 35  SKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIAAY 214
           S+  +LHA I+K      + +A+ ++ +Y+    L+ + + F    +    +W +++  Y
Sbjct: 23  SQAKQLHAQIVKTRGSRSVSLATIILGIYSDLNLLKESLEVFNNFRYVPTKAWKSVVRCY 82

Query: 215 VQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFISDV 394
                + ++ A F +M      P S+ F  ++ AC  L  L  G  +HG V++ G  SD+
Sbjct: 83  SCHGYFRDSLACFVEMRGWGKLPGSDVFPSVVRACTHLKELRVGESVHGCVIRFGMESDL 142

Query: 395 YVGSGLV 415
           Y G+ L+
Sbjct: 143 YTGNALM 149


>ref|XP_006356287.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565379764|ref|XP_006356288.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565379766|ref|XP_006356289.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X3 [Solanum tuberosum]
           gi|565379768|ref|XP_006356290.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X4 [Solanum tuberosum]
           gi|565379770|ref|XP_006356291.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X5 [Solanum tuberosum]
          Length = 1028

 Score =  110 bits (275), Expect = 2e-22
 Identities = 53/129 (41%), Positives = 80/129 (62%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIA 208
           D+  G +LH+IIIK  F S ++V +AL++MYA+CG L   R+ F++M  +D +SWNA+I 
Sbjct: 445 DVEMGRQLHSIIIKNKFASNLFVGNALIDMYAKCGALGDARRQFDKMLMRDHISWNAIIV 504

Query: 209 AYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFIS 388
            YVQ ++ E AF +F  M    + P     A +LSACA +  L+ G  +H  ++K G  S
Sbjct: 505 GYVQDEEEEEAFIMFHKMTLERIIPDEACLASVLSACANIHDLNKGKQVHSLLVKYGLES 564

Query: 389 DVYVGSGLV 415
            ++ GS LV
Sbjct: 565 GLFAGSSLV 573



 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 43/129 (33%), Positives = 75/129 (58%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIA 208
           +LS G+++HA+ +K+G  S +YV S+L+ MYA+C  +E+  + F  +  K+ + WNAL+A
Sbjct: 344 NLSFGLQVHALAVKQGLESNVYVGSSLINMYAKCQKMEAASEIFNSLGEKNEVLWNALLA 403

Query: 209 AYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFIS 388
            Y Q         +F+ M     +    T+  +LSACA L  +  G  +H  ++K  F S
Sbjct: 404 GYAQNGSACKVVKLFRSMRLSSFETDEYTYTSILSACACLEDVEMGRQLHSIIIKNKFAS 463

Query: 389 DVYVGSGLV 415
           +++VG+ L+
Sbjct: 464 NLFVGNALI 472



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 46/132 (34%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
 Frame = +2

Query: 5   AGVLPA---FRDLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTF 175
           A VL A     DL+KG ++H++++K G  S ++  S+L++MY +CGN+ S  + F  +  
Sbjct: 535 ASVLSACANIHDLNKGKQVHSLLVKYGLESGLFAGSSLVDMYCKCGNITSASEVFFCLPD 594

Query: 176 KDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGI 355
           +  +S NALI+ Y Q  +   A  +FQ+M+   ++P   TFA +L AC+  A +  G  +
Sbjct: 595 RSVVSTNALISGYAQ-TNINYAVRLFQNMLVEGLRPSEVTFASILDACSDQAYM-LGRQL 652

Query: 356 HGYVMKGGFISD 391
           H +++K GF  D
Sbjct: 653 HSFILKLGFSYD 664



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 40/122 (32%), Positives = 70/122 (57%)
 Frame = +2

Query: 50  LHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIAAYVQIKD 229
           +H   +K GF S+ ++ ++++++YA+CG++ S  K F  +  KD+++WN++I  Y +   
Sbjct: 83  IHLQSLKLGFASQGHLGNSIVDLYAKCGDMVSAEKAFFWLENKDSIAWNSIILMYSRNGL 142

Query: 230 YENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFISDVYVGSG 409
            EN    F  M    V P   ++A++LSACARL  +  G  +H  V+K GF  D +    
Sbjct: 143 LENVVEAFGSMWNSGVWPNQFSYAIVLSACARLVEVEIGKQVHCSVVKTGFEFDSFTEGS 202

Query: 410 LV 415
           L+
Sbjct: 203 LI 204



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
 Frame = +2

Query: 2    FAGVLPAFRDLSK---GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
            FA  L A   L+    G ++H++I   GF  +   +S+L++MYA+CG+++ + + F EM 
Sbjct: 736  FASALKACSTLASMQDGRKIHSLIFHTGFDMDELTSSSLIDMYAKCGDVKCSVQVFSEMV 795

Query: 173  FK-DALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNG 346
             K D +SWN++I  + +    E+A  +F++M R  VKP   TF  +L+AC+    +  G
Sbjct: 796  SKKDIISWNSMIVGFAKNGFAEDALKVFEEMKRESVKPDDITFLGVLTACSHAGMVSEG 854



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 37/126 (29%), Positives = 69/126 (54%)
 Frame = +2

Query: 38  KGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIAAYV 217
           K ME+   + ++G   +   +  ++      G L++ R+ F ++T  + ++WN +I+ + 
Sbjct: 246 KAMEVFEEMQERGCVPDQVASVTIINACVGLGRLDAARQLFTQITSPNVVAWNVMISGHA 305

Query: 218 QIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFISDVY 397
           +      A   FQDM++  ++P  +T   +LSA A +A+L  GL +H   +K G  S+VY
Sbjct: 306 KGGKEVEAIQFFQDMIKASIRPTRSTLGSVLSAVASVANLSFGLQVHALAVKQGLESNVY 365

Query: 398 VGSGLV 415
           VGS L+
Sbjct: 366 VGSSLI 371



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
 Frame = +2

Query: 2    FAGVLPAFRDLSK--GMELHAIIIKKGFG-SEMYVASALMEMYARCGNLESTRKTFEEMT 172
            FA +L A  D +   G +LH+ I+K GF   + ++A +L+ MY     LE     F E T
Sbjct: 634  FASILDACSDQAYMLGRQLHSFILKLGFSYDDEFLAISLIGMYYNSRKLEDASFLFSEFT 693

Query: 173  -FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGL 349
                 + W A+I+  +Q    E A   +Q M +  V P   TFA  L AC+ LAS+ +G 
Sbjct: 694  KLNSPVLWTAMISGNIQNDCGEEALIGYQKMRKFNVMPDQATFASALKACSTLASMQDGR 753

Query: 350  GIHGYVMKGGFISDVYVGSGLV 415
             IH  +   GF  D    S L+
Sbjct: 754  KIHSLIFHTGFDMDELTSSSLI 775



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/99 (30%), Positives = 54/99 (54%)
 Frame = +2

Query: 41  GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIAAYVQ 220
           G ++H  ++K GF  + +   +L++MYA+CG L   R+ F+     D +SW A+I+AY+Q
Sbjct: 181 GKQVHCSVVKTGFEFDSFTEGSLIDMYAKCGYLIDARRIFDGAVEPDNVSWTAMISAYIQ 240

Query: 221 IKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASL 337
           +   + A  +F++M      P       +++AC  L  L
Sbjct: 241 VGLPQKAMEVFEEMQERGCVPDQVASVTIINACVGLGRL 279


>ref|XP_006348495.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like isoform X1 [Solanum tuberosum]
           gi|565363546|ref|XP_006348496.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g13650-like isoform X2 [Solanum tuberosum]
           gi|565363548|ref|XP_006348497.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g13650-like isoform X3 [Solanum tuberosum]
           gi|565363550|ref|XP_006348498.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g13650-like isoform X4 [Solanum tuberosum]
           gi|565363552|ref|XP_006348499.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g13650-like isoform X5 [Solanum tuberosum]
          Length = 990

 Score =  110 bits (275), Expect = 2e-22
 Identities = 53/129 (41%), Positives = 74/129 (57%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIA 208
           D S G ++HA ++K   G  +YV +AL++MYA+CG L+     F  ++ KD  +W  +I+
Sbjct: 532 DASLGKQVHAHVVKADLGGNIYVGTALVDMYAKCGQLDDAELIFYRLSEKDVFTWTVVIS 591

Query: 209 AYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFIS 388
            Y Q    E AF  F  M R  +KP   T A  L  C+R+ASL NG  +H  VMK G  S
Sbjct: 592 GYAQSDQGEKAFRCFNQMQREAIKPNEFTLASCLKGCSRIASLDNGQQLHSVVMKSGQFS 651

Query: 389 DVYVGSGLV 415
           D+YV S L+
Sbjct: 652 DMYVASALI 660



 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 46/129 (35%), Positives = 72/129 (55%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIA 208
           DL  G +LHA+++K    S++YV SAL+++YA+C  LES  K F  M  ++++SWN L+ 
Sbjct: 229 DLEFGKQLHAVVVKGAVFSDVYVGSALVDLYAKCCELESAVKVFFSMPEQNSVSWNVLLN 288

Query: 209 AYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFIS 388
            YVQ    E A  +F  M   E++  + T + +L  CA   +L  G  IH  ++K G   
Sbjct: 289 GYVQAGQGEEALKLFMKMSDSEMRFSNYTLSTILKGCANSVNLKAGQVIHSMLVKIGSEI 348

Query: 389 DVYVGSGLV 415
           D +    L+
Sbjct: 349 DDFTSCSLL 357



 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 42/128 (32%), Positives = 67/128 (52%)
 Frame = +2

Query: 32  LSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIAA 211
           L +G  LH  +I+ G   + ++  +L+  Y++CG+L      F+ +  +D +SW ALIA 
Sbjct: 129 LKEGKALHGEMIRSGVEPDSHLWVSLINFYSKCGDLVFAENVFDLIPSRDVVSWTALIAG 188

Query: 212 YVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFISD 391
           ++          +F DM   +++P   T A +L  C+    L  G  +H  V+KG   SD
Sbjct: 189 FIAQGYGSKGICLFCDMRGEDIRPNEFTLATVLKGCSMCLDLEFGKQLHAVVVKGAVFSD 248

Query: 392 VYVGSGLV 415
           VYVGS LV
Sbjct: 249 VYVGSALV 256



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 10/118 (8%)
 Frame = +2

Query: 32  LSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIAA 211
           L  G +LH++++K G  S+MYVASAL++MYA+ G ++     F+ M   D + WN +I A
Sbjct: 634 LDNGQQLHSVVMKSGQFSDMYVASALIDMYAKSGCIKDAESLFQSMESSDTVLWNTIIYA 693

Query: 212 YVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLA----------SLHNGLGI 355
           Y Q    E A   F+ M+   + P   TF  +LSAC+ L           S+ NG GI
Sbjct: 694 YSQHGLDEKALKTFRTMLSEGILPDGITFIAVLSACSHLGLVKEGQEHFDSIKNGFGI 751



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 38/129 (29%), Positives = 68/129 (52%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIA 208
           DL     +HA + K GF SE  V++AL+ MY + G++    + F  ++ +D +SWN+L++
Sbjct: 431 DLRCCKSIHACVYKFGFDSEECVSNALIAMYMKFGSVLDGYRIFSSLSNRDIISWNSLLS 490

Query: 209 AYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFIS 388
            +   +       IF+ ++   ++P   T    L +CA L     G  +H +V+K     
Sbjct: 491 GFHDNETSYEGPKIFRQLLVEGLRPNIYTLISNLRSCASLLDASLGKQVHAHVVKADLGG 550

Query: 389 DVYVGSGLV 415
           ++YVG+ LV
Sbjct: 551 NIYVGTALV 559



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/129 (27%), Positives = 63/129 (48%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIA 208
           +L  G  +H++++K G   + + + +L++MY +CG  +   K F      D ++W A+I+
Sbjct: 330 NLKAGQVIHSMLVKIGSEIDDFTSCSLLDMYNKCGLQDDALKVFLRTKNHDIVAWTAMIS 389

Query: 209 AYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFIS 388
              Q      A  +F  M+   ++P   T A ++SA A    L     IH  V K GF S
Sbjct: 390 GLDQQGQKREAIQLFCLMMHSGLRPNQFTLASVVSAAADSVDLRCCKSIHACVYKFGFDS 449

Query: 389 DVYVGSGLV 415
           +  V + L+
Sbjct: 450 EECVSNALI 458


>gb|EOY10376.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 720

 Score =  110 bits (275), Expect = 2e-22
 Identities = 53/140 (37%), Positives = 86/140 (61%), Gaps = 3/140 (2%)
 Frame = +2

Query: 5   AGVLPAFR---DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTF 175
           + VLP F    D+ KG E+H   I+  F S+ Y+ S+L++MYA C  +E + + F     
Sbjct: 251 SSVLPIFAEYVDVMKGKEIHGYAIRHRFDSDWYIGSSLVDMYANCSRIEDSCRVFNLFPQ 310

Query: 176 KDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGI 355
           +D +SWN++IA  VQ   ++    +F+ M+  +VKP   +F+ ++ ACA L +LH G  +
Sbjct: 311 RDDISWNSIIAGCVQNGMFDKGLNLFRQMLTAKVKPRDVSFSSIMPACAYLTTLHLGKEL 370

Query: 356 HGYVMKGGFISDVYVGSGLV 415
           HGY+++GGF  +V+V S LV
Sbjct: 371 HGYIIRGGFDDNVFVASSLV 390



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
 Frame = +2

Query: 2   FAGVLPA---FRDLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           F+ ++PA      L  G ELH  II+ GF   ++VAS+L++MYA+CGN+++ R  F++M 
Sbjct: 351 FSSIMPACAYLTTLHLGKELHGYIIRGGFDDNVFVASSLVDMYAKCGNIKAARWIFDQME 410

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACA 322
           + D +SW A+I  Y        A  +F+ M    VKP   +F  + +AC+
Sbjct: 411 YHDMVSWTAIIMGYALHGHAHEALLLFKQMEMDGVKPNYVSFIAVFTACS 460



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 38/168 (22%)
 Frame = +2

Query: 26  RDLSKGMELHAIIIKKGFGSEMYVASALMEMYAR-------------------------- 127
           ++L  G  +H  II+ G   +++  +AL+ MYA+                          
Sbjct: 122 KNLRLGESIHGCIIRLGLDFDLFTGNALLNMYAKFQSLEVNGGHKVFTFNMLDGMPKGNE 181

Query: 128 -CGNL-----------ESTRKTFEEMTFKDALSWNALIAAYVQIKDYENAFAIFQDMVRL 271
            CG L           +S RK F+ M  +D +SWN +IA   Q   YE A  + ++M   
Sbjct: 182 LCGRLAQKKGRNVFQLDSVRKVFDMMPKRDVVSWNTVIAGNAQNGMYEVALRMVREMGNA 241

Query: 272 EVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFISDVYVGSGLV 415
            +KP S T + +L   A    +  G  IHGY ++  F SD Y+GS LV
Sbjct: 242 NMKPDSYTLSSVLPIFAEYVDVMKGKEIHGYAIRHRFDSDWYIGSSLV 289


>ref|XP_004228900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Solanum lycopersicum]
          Length = 828

 Score =  110 bits (275), Expect = 2e-22
 Identities = 53/129 (41%), Positives = 74/129 (57%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIA 208
           D S G ++HA ++K   G  +YV +AL++MYA+CG L+     F  ++ KD  +W  +I+
Sbjct: 607 DASLGKQVHAHVVKADLGGNIYVGTALVDMYAKCGQLDDAELIFYRLSEKDVFTWTVVIS 666

Query: 209 AYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFIS 388
            Y Q    E AF  F  M R  +KP   T A  L  C+R+ASL NG  +H  VMK G  S
Sbjct: 667 GYAQSDQGEKAFRCFNQMQREAIKPNEFTLASCLKGCSRIASLDNGRQLHSVVMKSGQFS 726

Query: 389 DVYVGSGLV 415
           D+YV S L+
Sbjct: 727 DMYVASALI 735



 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 46/129 (35%), Positives = 72/129 (55%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIA 208
           DL  G +LHA+++K    S++YV SAL+++YA+C  LES  K F  M  ++++SWN L+ 
Sbjct: 304 DLEFGKQLHAVVVKGAAFSDVYVGSALVDLYAKCCELESAVKVFFSMPEQNSVSWNVLLN 363

Query: 209 AYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFIS 388
            YVQ    E A  +F  M   E++  + T + +L  CA   +L  G  IH  ++K G   
Sbjct: 364 GYVQAGQGEEALKLFLKMSDSEMRFSNYTLSTILKGCANSVNLKAGQVIHSMLVKIGSEI 423

Query: 389 DVYVGSGLV 415
           D +    L+
Sbjct: 424 DDFTSCSLL 432



 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 43/128 (33%), Positives = 67/128 (52%)
 Frame = +2

Query: 32  LSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIAA 211
           L +G  LH  +I+ G   + Y+  +L+  Y++CG+L      F+ +  +D +SW ALIA 
Sbjct: 204 LKEGKALHGEMIRSGVEPDSYLWVSLINFYSKCGDLVFAENVFDLIPSRDVVSWTALIAG 263

Query: 212 YVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFISD 391
           ++          +F DM   +++P   T A +L  C+    L  G  +H  V+KG   SD
Sbjct: 264 FIAQGYGSKGICLFCDMKGEDIRPNEFTLATVLKGCSMCLDLEFGKQLHAVVVKGAAFSD 323

Query: 392 VYVGSGLV 415
           VYVGS LV
Sbjct: 324 VYVGSALV 331



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 39/99 (39%), Positives = 58/99 (58%)
 Frame = +2

Query: 32   LSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIAA 211
            L  G +LH++++K G  S+MYVASAL++MYA+ G ++     F+ M   D + WN +I A
Sbjct: 709  LDNGRQLHSVVMKSGQFSDMYVASALIDMYAKSGCIKDAESLFQSMESSDTVLWNTIIYA 768

Query: 212  YVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARL 328
            Y Q    E A   F+ M+   + P   TF  +LSAC+ L
Sbjct: 769  YSQHGLDEEALKTFRTMLSEGIPPDGITFIAVLSACSHL 807



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 37/122 (30%), Positives = 65/122 (53%)
 Frame = +2

Query: 50  LHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIAAYVQIKD 229
           +HA + K GF SE  V +AL+ MY + G++    + F  ++ +D +SWN+L++ +   + 
Sbjct: 513 IHACVYKFGFDSEECVCNALIAMYMKFGSVLDGYRIFSSLSNRDIISWNSLLSGFHDNET 572

Query: 230 YENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFISDVYVGSG 409
                 IF+ ++   +KP   T    L +CA L     G  +H +V+K     ++YVG+ 
Sbjct: 573 SYEGPKIFRQLLVEGLKPNIYTLISNLRSCASLLDASLGKQVHAHVVKADLGGNIYVGTA 632

Query: 410 LV 415
           LV
Sbjct: 633 LV 634



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/129 (27%), Positives = 63/129 (48%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIA 208
           +L  G  +H++++K G   + + + +L++MY +CG  +   K F      D ++W A+I+
Sbjct: 405 NLKAGQVIHSMLVKIGSEIDDFTSCSLLDMYNKCGLQDDALKVFLRTKNHDIVAWTAMIS 464

Query: 209 AYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFIS 388
              Q      A  +F  M+   ++P   T A ++SA A    +     IH  V K GF S
Sbjct: 465 GLDQQGQKREAIHLFCLMMHSGLRPNQFTLASVVSAAADSVDIRCCKSIHACVYKFGFDS 524

Query: 389 DVYVGSGLV 415
           +  V + L+
Sbjct: 525 EECVCNALI 533


>ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  110 bits (275), Expect = 2e-22
 Identities = 47/129 (36%), Positives = 85/129 (65%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIA 208
           D+S+G E+H   I++G  +++YVAS+L++MYA+C  +  + + F  +T +D +SWN++IA
Sbjct: 254 DISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIA 313

Query: 209 AYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFIS 388
             VQ   ++     F+ M+  ++KP S +F+ ++ ACA L +LH G  +HGY+ + GF  
Sbjct: 314 GCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDE 373

Query: 389 DVYVGSGLV 415
           ++++ S LV
Sbjct: 374 NIFIASSLV 382



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
 Frame = +2

Query: 2   FAGVLPAFRDLSK---GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           F+ ++PA   L+    G +LH  I + GF   +++AS+L++MYA+CGN+ + ++ F+ M 
Sbjct: 343 FSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMR 402

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGL 349
            +D +SW A+I          +A  +F+ M    +KP    F  +L+AC+     H GL
Sbjct: 403 LRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACS-----HGGL 456



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 48/161 (29%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLE---------------------- 142
           DL+ G  LH  II+ G   ++Y  +ALM MY++   LE                      
Sbjct: 121 DLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRS 180

Query: 143 ----------STRKTFEEMTFKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISN 292
                     S RK FE M  KD +SWN +IA   +   YE    + ++M    +KP S 
Sbjct: 181 VRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSF 240

Query: 293 TFAVLLSACARLASLHNGLGIHGYVMKGGFISDVYVGSGLV 415
           T + +L   A    +  G  IHG  ++ G  +D+YV S L+
Sbjct: 241 TLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLI 281



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/132 (27%), Positives = 65/132 (49%)
 Frame = +2

Query: 20  AFRDLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNA 199
           + +  S+  +LHA ++K    S +   S L+ +Y+    L  + + F  + F  AL+W +
Sbjct: 18  SIKSRSQAQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKS 76

Query: 200 LIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGG 379
           +I  Y        +   F  M+   + P  N F  +L +CA L  L+ G  +HGY+++ G
Sbjct: 77  VIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVG 136

Query: 380 FISDVYVGSGLV 415
              D+Y G+ L+
Sbjct: 137 LDFDLYTGNALM 148


>ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  110 bits (275), Expect = 2e-22
 Identities = 47/129 (36%), Positives = 85/129 (65%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIA 208
           D+S+G E+H   I++G  +++YVAS+L++MYA+C  +  + + F  +T +D +SWN++IA
Sbjct: 254 DISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIA 313

Query: 209 AYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFIS 388
             VQ   ++     F+ M+  ++KP S +F+ ++ ACA L +LH G  +HGY+ + GF  
Sbjct: 314 GCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDE 373

Query: 389 DVYVGSGLV 415
           ++++ S LV
Sbjct: 374 NIFIASSLV 382



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 48/161 (29%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
 Frame = +2

Query: 29  DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLE---------------------- 142
           DL+ G  LH  II+ G   ++Y  +ALM MY++   LE                      
Sbjct: 121 DLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRS 180

Query: 143 ----------STRKTFEEMTFKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISN 292
                     S RK FE M  KD +SWN +IA   +   YE    + ++M    +KP S 
Sbjct: 181 VRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSF 240

Query: 293 TFAVLLSACARLASLHNGLGIHGYVMKGGFISDVYVGSGLV 415
           T + +L   A    +  G  IHG  ++ G  +D+YV S L+
Sbjct: 241 TLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLI 281



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
 Frame = +2

Query: 2   FAGVLPAFRDLSK---GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           F+ ++PA   L+    G +LH  I + GF   +++AS+L++MYA+CGN+ + ++ F+ M 
Sbjct: 343 FSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMR 402

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGL 349
            +D +SW A+I          +A  +F+ M    +K +       L+AC+     H GL
Sbjct: 403 LRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKAV-------LTACS-----HGGL 449



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/132 (27%), Positives = 65/132 (49%)
 Frame = +2

Query: 20  AFRDLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNA 199
           + +  S+  +LHA ++K    S +   S L+ +Y+    L  + + F  + F  AL+W +
Sbjct: 18  SIKSRSQAQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKS 76

Query: 200 LIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGG 379
           +I  Y        +   F  M+   + P  N F  +L +CA L  L+ G  +HGY+++ G
Sbjct: 77  VIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVG 136

Query: 380 FISDVYVGSGLV 415
              D+Y G+ L+
Sbjct: 137 LDFDLYTGNALM 148


>gb|EXC74564.1| hypothetical protein L484_000327 [Morus notabilis]
          Length = 590

 Score =  110 bits (274), Expect = 3e-22
 Identities = 50/140 (35%), Positives = 88/140 (62%), Gaps = 3/140 (2%)
 Frame = +2

Query: 5   AGVLPAFR---DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTF 175
           + VLP F    D+ KG E+H   I+ GF  ++++ S+L++MYA+C   E + + F+ ++ 
Sbjct: 121 SSVLPIFAQYVDIIKGKEIHGYAIRNGFHVDVFIGSSLIDMYAKCTTTEDSLRVFDFLSC 180

Query: 176 KDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGI 355
            DA++WN++IA  VQ   ++     F+ M+  ++KP+  TF+ ++ ACA L +LH G  +
Sbjct: 181 HDAVAWNSIIAGCVQNGMFDEGLRFFRQMLVAKIKPMQVTFSSIMPACAHLTTLHLGKQL 240

Query: 356 HGYVMKGGFISDVYVGSGLV 415
           HGY+++  F  +VY+ S LV
Sbjct: 241 HGYIIRSRFDDNVYIASSLV 260



 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 27/157 (17%)
 Frame = +2

Query: 26  RDLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLE--------------------- 142
           +DL  G  +H  II+ G  S++Y  +ALM MY++  +L+                     
Sbjct: 3   KDLRLGESVHGSIIRYGMDSDLYTCNALMSMYSKFQSLDNEHQLFDETPQGKEMHKMEVK 62

Query: 143 ------STRKTFEEMTFKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAV 304
                 S RK F+ M +KD +SWN +IA   Q   YE A ++ ++M    +KP + T + 
Sbjct: 63  RVVQINSVRKVFDMMPYKDIVSWNTVIAGNAQNGMYEEALSMLREMGNDNMKPDAYTLSS 122

Query: 305 LLSACARLASLHNGLGIHGYVMKGGFISDVYVGSGLV 415
           +L   A+   +  G  IHGY ++ GF  DV++GS L+
Sbjct: 123 VLPIFAQYVDIIKGKEIHGYAIRNGFHVDVFIGSSLI 159



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
 Frame = +2

Query: 2   FAGVLPAFRDLSK---GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           F+ ++PA   L+    G +LH  II+  F   +Y+AS+L++MY++CGN+   R  F+ + 
Sbjct: 221 FSSIMPACAHLTTLHLGKQLHGYIIRSRFDDNVYIASSLVDMYSKCGNIRIARWIFDRIE 280

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACA 322
             D +SW A+I          +A ++F+ M     KP   TF  +L+AC+
Sbjct: 281 THDIVSWTAIIMGCAFNGYAYDAISLFERMEVEGTKPCYVTFIAVLTACS 330


>gb|EXC01816.1| hypothetical protein L484_021456 [Morus notabilis]
          Length = 709

 Score =  110 bits (274), Expect = 3e-22
 Identities = 50/140 (35%), Positives = 88/140 (62%), Gaps = 3/140 (2%)
 Frame = +2

Query: 5   AGVLPAFR---DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTF 175
           + VLP F    D+ KG E+H   I+ GF  ++++ S+L++MYA+C   E + + F+ ++ 
Sbjct: 240 SSVLPIFAQYVDIIKGKEIHGYAIRNGFHVDVFIGSSLIDMYAKCTTTEDSLRVFDFLSC 299

Query: 176 KDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGI 355
            DA++WN++IA  VQ   ++     F+ M+  ++KP+  TF+ ++ ACA L +LH G  +
Sbjct: 300 HDAVAWNSIIAGCVQNGMFDEGLRFFRQMLVAKIKPMQVTFSSIMPACAHLTTLHLGKQL 359

Query: 356 HGYVMKGGFISDVYVGSGLV 415
           HGY+++  F  +VY+ S LV
Sbjct: 360 HGYIIRSRFDDNVYIASSLV 379



 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 27/157 (17%)
 Frame = +2

Query: 26  RDLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLE--------------------- 142
           +DL  G  +H  II+ G  S++Y  +ALM MY++  +L+                     
Sbjct: 122 KDLRLGESVHGSIIRYGMDSDLYTCNALMSMYSKFQSLDNEHQLFDETPQGKEMHKMEVK 181

Query: 143 ------STRKTFEEMTFKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAV 304
                 S RK F+ M +KD +SWN +IA   Q   YE A ++ ++M    +KP + T + 
Sbjct: 182 RVVQINSVRKVFDMMPYKDIVSWNTVIAGNAQNGMYEEALSMLREMGNDNMKPDAYTLSS 241

Query: 305 LLSACARLASLHNGLGIHGYVMKGGFISDVYVGSGLV 415
           +L   A+   +  G  IHGY ++ GF  DV++GS L+
Sbjct: 242 VLPIFAQYVDIIKGKEIHGYAIRNGFHVDVFIGSSLI 278



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
 Frame = +2

Query: 2   FAGVLPAFRDLSK---GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           F+ ++PA   L+    G +LH  II+  F   +Y+AS+L++MY++CGN+   R  F+ + 
Sbjct: 340 FSSIMPACAHLTTLHLGKQLHGYIIRSRFDDNVYIASSLVDMYSKCGNIRIARWIFDRIE 399

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACA 322
             D +SW A+I          +A ++F+ M     KP   TF  +L+AC+
Sbjct: 400 THDIVSWTAIIMGCAFNGYAYDAISLFERMEVEGTKPCYVTFIAVLTACS 449


>ref|XP_004976211.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like isoform X1 [Setaria italica]
           gi|514802639|ref|XP_004976212.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g23330-like isoform X2 [Setaria italica]
          Length = 644

 Score =  110 bits (274), Expect = 3e-22
 Identities = 51/140 (36%), Positives = 86/140 (61%), Gaps = 3/140 (2%)
 Frame = +2

Query: 5   AGVLPAFR---DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTF 175
           + VLP F    D+ +GME+H   I+ GF ++++V S+L++MYA C   + + K F+++  
Sbjct: 175 SSVLPIFAECADVKRGMEVHGFAIRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDKLPV 234

Query: 176 KDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGI 355
           +D + WN+++A   Q    E A  IF  M++  V+P+  TF+ L+  C  LASL  G  +
Sbjct: 235 RDPILWNSMLAGCAQNGSVEEALGIFHRMLQAGVRPVPVTFSSLIPICGNLASLRFGKQL 294

Query: 356 HGYVMKGGFISDVYVGSGLV 415
           H YV++GGF  +V++ S L+
Sbjct: 295 HAYVIQGGFEDNVFISSSLI 314



 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 19/144 (13%)
 Frame = +2

Query: 41  GMELHAIIIKKGFGSEMYVASALMEMYARCGN-------------------LESTRKTFE 163
           G  LH + I+ G  ++ + A+AL+  Y +  +                   LES RK F+
Sbjct: 70  GASLHGLAIRSGAFADRFTANALLNFYCKLPDSYLHSSGVISMDGTGSATALESVRKVFD 129

Query: 164 EMTFKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHN 343
           EM  +D +SWN L+    +   ++ A  + + M     +P S T + +L   A  A +  
Sbjct: 130 EMLERDVVSWNTLVLGCAEEGRHQEALGLVRKMWSDGFRPDSFTLSSVLPIFAECADVKR 189

Query: 344 GLGIHGYVMKGGFISDVYVGSGLV 415
           G+ +HG+ ++ GF +DV+VGS L+
Sbjct: 190 GMEVHGFAIRNGFDNDVFVGSSLI 213



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
 Frame = +2

Query: 2   FAGVLPAFRDLSK---GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           F+ ++P   +L+    G +LHA +I+ GF   ++++S+L++MY +CG +   R  F+ M 
Sbjct: 275 FSSLIPICGNLASLRFGKQLHAYVIQGGFEDNVFISSSLIDMYCKCGEISIARCIFDRMP 334

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNG 346
             D +S  A+I  Y        A  +F+ M    VKP   TF  +L+AC+    L  G
Sbjct: 335 SPDIVSRTAMIMGYALHGPAREALVLFEKMELGNVKPNHITFLAVLTACSHAGLLDKG 392


>ref|XP_004247740.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Solanum lycopersicum]
          Length = 699

 Score =  109 bits (273), Expect = 3e-22
 Identities = 51/140 (36%), Positives = 85/140 (60%), Gaps = 3/140 (2%)
 Frame = +2

Query: 5   AGVLPAFR---DLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTF 175
           + VLP F    D+ KG E+H   I+ GF  + ++ S+L++MYA C  +E + + F  ++ 
Sbjct: 231 SSVLPVFARHVDVLKGKEIHGYAIRHGFDKDEFIGSSLIDMYANCTRVEDSYRVFNLLSE 290

Query: 176 KDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGI 355
           KD +SWN++IA  VQ   +     +F+ M+   VKP+  +F+ +L ACA L +LH G  +
Sbjct: 291 KDDVSWNSVIAGCVQNGTFVEGLGLFRQMLAANVKPVEVSFSAILPACAHLTTLHLGKQL 350

Query: 356 HGYVMKGGFISDVYVGSGLV 415
           H Y+++ GF  ++Y+ S LV
Sbjct: 351 HAYIIRVGFNQNMYIASSLV 370



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
 Frame = +2

Query: 2   FAGVLPAFRDLSK---GMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           F+ +LPA   L+    G +LHA II+ GF   MY+AS+L++MYA+ G + + R  F+ M 
Sbjct: 331 FSAILPACAHLTTLHLGKQLHAYIIRVGFNQNMYIASSLVDMYAKSGKIMTARLIFDRME 390

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNG 346
             D++SW  +I  Y        A  +F++M   ++KP +  +  +L+AC+    +  G
Sbjct: 391 IHDSVSWTTIIMGYALNGHAREATILFENMQHDKIKPNAVAYLAILTACSHAGLVDEG 448



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
 Frame = +2

Query: 26  RDLSKGMELHAIIIKKGFGSEMYVASALMEMYAR-------------------CGNLEST 148
           ++L  G  +H  +I+ G  S+ Y  +ALM MYA+                      L+S 
Sbjct: 121 KELRVGESVHGCVIRFGLESDRYTGNALMNMYAKLQVLSHDYHLFDEIPLVKNATGLDSV 180

Query: 149 RKTFEEMTFKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARL 328
            K F+ M  KD +SWN +I   VQ   YE A    ++M    +KP   T + +L   AR 
Sbjct: 181 SKIFQMMPDKDVVSWNTVIGGNVQSGLYEEALERLREMSNAYLKPDCFTLSSVLPVFARH 240

Query: 329 ASLHNGLGIHGYVMKGGFISDVYVGSGLV 415
             +  G  IHGY ++ GF  D ++GS L+
Sbjct: 241 VDVLKGKEIHGYAIRHGFDKDEFIGSSLI 269



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/127 (24%), Positives = 61/127 (48%)
 Frame = +2

Query: 35  SKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIAAY 214
           S+  +LHA I+K      + +A+ ++ +Y+    L+ + + F    +    +W +++  Y
Sbjct: 23  SQAKQLHAQIVKTRGSRSVSLATIILGIYSDLNLLKESLEVFNNFHYVPTKAWKSVVRCY 82

Query: 215 VQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFISDV 394
                + ++ A F +M      P  + F  ++ AC  L  L  G  +HG V++ G  SD 
Sbjct: 83  SCNGYFRDSLACFVEMRGWGKLPGRDVFPSVVRACTHLKELRVGESVHGCVIRFGLESDR 142

Query: 395 YVGSGLV 415
           Y G+ L+
Sbjct: 143 YTGNALM 149


>dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  109 bits (273), Expect = 3e-22
 Identities = 51/128 (39%), Positives = 85/128 (66%)
 Frame = +2

Query: 32  LSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIAA 211
           L +G ++   II+ G+GS+  V +AL+ MYA+CG+L+   + FE+++ ++ ++WNA+I A
Sbjct: 429 LKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITA 488

Query: 212 YVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFISD 391
           YVQ + Y+NA A FQ +++  +KP S+TF  +L+ C    SL  G  +H  +MK G  SD
Sbjct: 489 YVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESD 548

Query: 392 VYVGSGLV 415
           ++V + LV
Sbjct: 549 LHVSNALV 556



 Score =  101 bits (251), Expect = 1e-19
 Identities = 47/131 (35%), Positives = 80/131 (61%)
 Frame = +2

Query: 23  FRDLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNAL 202
           F++L  G  ++  I K G   ++++ + L+ MYA+CGN  S ++ F++M  KD  SWN L
Sbjct: 123 FKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLL 182

Query: 203 IAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGF 382
           +  YVQ   YE AF + + MV+  VKP   TF  +L+ACA   ++  G  ++  ++K G+
Sbjct: 183 LGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGW 242

Query: 383 ISDVYVGSGLV 415
            +D++VG+ L+
Sbjct: 243 DTDLFVGTALI 253



 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 48/128 (37%), Positives = 75/128 (58%)
 Frame = +2

Query: 32  LSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIAA 211
           L  G  +H +I+K G  S+++V++AL+ M+  CG+L S +  F +M  +D +SWN +IA 
Sbjct: 530 LELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAG 589

Query: 212 YVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFISD 391
           +VQ    + AF  F+ M    +KP   TF  LL+ACA   +L  G  +H  + +  F  D
Sbjct: 590 FVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCD 649

Query: 392 VYVGSGLV 415
           V VG+GL+
Sbjct: 650 VLVGTGLI 657



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 39/128 (30%), Positives = 76/128 (59%)
 Frame = +2

Query: 32  LSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALIAA 211
           L +G ++HA + + G+ +E+YV +A++ MY +CG++E   + F+ +  ++ +SW A+IA 
Sbjct: 328 LEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAG 387

Query: 212 YVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFISD 391
           + Q    + AF  F  M+   ++P   TF  +L AC+  ++L  G  I  ++++ G+ SD
Sbjct: 388 FAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSD 447

Query: 392 VYVGSGLV 415
             V + L+
Sbjct: 448 DRVRTALL 455



 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 37/130 (28%), Positives = 76/130 (58%)
 Frame = +2

Query: 26  RDLSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMTFKDALSWNALI 205
           R++ KG EL+ +I+K G+ ++++V +AL+ M+ +CG++    K F+ +  +D ++W ++I
Sbjct: 225 RNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMI 284

Query: 206 AAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGLGIHGYVMKGGFI 385
               +   ++ A  +FQ M    V+P    F  LL AC    +L  G  +H  + + G+ 
Sbjct: 285 TGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWD 344

Query: 386 SDVYVGSGLV 415
           +++YVG+ ++
Sbjct: 345 TEIYVGTAIL 354



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
 Frame = +2

Query: 2   FAGVLPAFRD---LSKGMELHAIIIKKGFGSEMYVASALMEMYARCGNLESTRKTFEEMT 172
           F G+L A      L++G  LHA+I +  F  ++ V + L+ MY +CG++E   + F ++ 
Sbjct: 618 FTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP 677

Query: 173 FKDALSWNALIAAYVQIKDYENAFAIFQDMVRLEVKPISNTFAVLLSACARLASLHNGL 349
            K+  SW ++IA Y Q    + A  +F  M +  VKP   TF   LSACA    +  GL
Sbjct: 678 KKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGL 736