BLASTX nr result

ID: Ephedra27_contig00029536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00029536
         (480 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                             102   5e-20

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score =  102 bits (254), Expect = 5e-20
 Identities = 56/157 (35%), Positives = 93/157 (59%)
 Frame = +3

Query: 6   SANKKESLLLLQDLHRLGKCVKQIKSRPHLRRGDMKESAEEAMKLVVKGSVFCLQRIKDT 185
           S N+ E   +L+++  L K VKQIK RP L++  M +  ++A +L+V+GS+ C  ++  +
Sbjct: 185 SDNQDECFHVLKEMIFLAKVVKQIKERPQLQQR-MHDEVKDATELIVEGSIKCCSQMASS 243

Query: 186 KIQGFMHAGAHRTHLAELKSKVDKTYRDLMLNLGICIYDAASATNSQDRRVSSYPRKAVG 365
           +   F     ++  L E+  ++D  Y+ + + +GI IYD      +   R   YP  AVG
Sbjct: 244 QFSNFFSTSVNKEELGEVAQQLDVKYKHIYIQMGIEIYDVGQCKKANLSR--RYPEHAVG 301

Query: 366 IDDQFYEVVDLLELESPKSAVAVLIYGGVGTGKTTLA 476
           +++   EV+DLLE  S ++AVAV+++G  G GKTTLA
Sbjct: 302 LEESSREVIDLLEWGSQQNAVAVILHGFGGMGKTTLA 338


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