BLASTX nr result

ID: Ephedra27_contig00029385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00029385
         (1207 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17628.1| unknown [Picea sitchensis]                              64   9e-08

>gb|ABR17628.1| unknown [Picea sitchensis]
          Length = 382

 Score = 64.3 bits (155), Expect = 9e-08
 Identities = 71/280 (25%), Positives = 114/280 (40%), Gaps = 14/280 (5%)
 Frame = -2

Query: 798 LSSSEGLPNEMCVLMVCNAILCFLIGTYEWAQRNHTNAILLLLSMFWIWGNLKLTFVTYL 619
           L +S  L   M  +++C+A+L   +G  +W Q N  N +L   S+ WIWG+LKL  V  L
Sbjct: 83  LQTSGNLLWHMFAVVLCSAVLVVQLGFSKWYQSNRGNVLLGFASVLWIWGSLKLFLVNNL 142

Query: 618 NQIFASWMV-TSIIFTNELHRLSFRKQVFSRLPGFHMRIRTTLLMWIPGKAYYPSL---- 454
              F+  +V    IF + L+R+ F   +FSR  G  M+I   L      +A    L    
Sbjct: 143 ELSFSFPVVLIQCIFMSILYRVPFCIHIFSRALGLGMQIFAILAKGNNSEAPILLLLLFV 202

Query: 453 -PSTGWNIICSLCNKTRHWTINILSCIPWKAI-NGYYQSRTLGFTDIAQLSSLRNMLFYF 280
             + G  I   L  +  +   N LS +  + +     + +      + Q+ +LRN+L   
Sbjct: 203 GHTVGMLIAFVLDRECGYSFFNSLSQLLLEDVTQSGPREQFFRLPLLKQVPNLRNILSGI 262

Query: 279 LKFKSLRGLHFKDPLSPKPVNXXXXXXXXXXXXXXXXGVSSLRSINPTAFPE--VPSNNL 106
           L  K  +     +P+  K +                 GVS L+S  P       + +NNL
Sbjct: 263 LNLKVTKKKELDEPICQKAIRTNAPRRALGGFAGGFCGVSGLKSNRPPVITNTTISANNL 322

Query: 105 FASCDIRVPLVTNLVXXXXXSFL-----QDMDSAKSTSIG 1
                      T+        F+      ++DS  STS+G
Sbjct: 323 SGKIGFSDTSFTDSWPYSLGVFISPSADNNVDSILSTSVG 362


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