BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00029349
         (500 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513 [S...   113   3e-23
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...   111   9e-23
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   109   3e-22
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa...   109   4e-22
gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subc...   108   1e-21
gb|EOY00074.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ...   107   1e-21
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g...   107   2e-21
gb|EOY12080.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ...   106   3e-21
gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]                106   3e-21
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]   106   4e-21
gb|AAB82754.1| retrofit [Oryza longistaminata]                        105   5e-21
emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]   105   5e-21
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   105   5e-21
gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Ja...   105   6e-21
gb|AAC02664.1| polyprotein [Arabidopsis thaliana]                     105   6e-21
gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indi...   105   8e-21
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz...   105   8e-21
gb|ABA95366.1| retrotransposon protein, putative, Ty1-copia subc...   104   1e-20
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]           104   1e-20
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]        104   1e-20

>ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513 [Sorghum bicolor]
            gi|241942867|gb|EES16012.1| hypothetical protein
            SORBIDRAFT_08g015513 [Sorghum bicolor]
          Length = 757

 Score =  113 bits (282), Expect = 3e-23
 Identities = 58/140 (41%), Positives = 90/140 (64%)
 Frame = +3

Query: 9    ANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQL 188
            A++AG + + ++T G+ + L ENL+SW   KQ T+ +S TEAEY+A+ + T ++MW  +L
Sbjct: 617  ADWAGDVDDRRSTGGFAVFLGENLISWTAQKQATVSRSSTEAEYKALANATAEVMWVQKL 676

Query: 189  LKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKITT 368
            L    V   +   +  DN GA  L  NP++H + K+I+I  +F+RE+   +L DI+ I++
Sbjct: 677  LAELCVPHARVARLWCDNLGAKYLSANPVFHARTKHIEIDFHFVRERVAQKLLDIRFISS 736

Query: 369  ENQLGDGFTKPLGKNKFTKF 428
            E+QL DGFTK L   KF KF
Sbjct: 737  EDQLADGFTKSLPVTKFHKF 756


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score =  111 bits (278), Expect = 9e-23
 Identities = 58/148 (39%), Positives = 91/148 (61%)
 Frame = +3

Query: 6    DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
            DA++AG I + ++T G+ + L  NL+SW   KQ T+ +S TEAEY+AV + T ++MW   
Sbjct: 1925 DADWAGSIDDRRSTGGFAVFLGSNLVSWSARKQATVSRSSTEAEYKAVANATAEVMWVQA 1984

Query: 186  LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
            LLK   +   +   +  DN GA  L  NP++H + K+I+I  +F+RE+   +  +IK I+
Sbjct: 1985 LLKELGINSPETACMWCDNLGATYLAVNPVFHARTKHIEIDYHFVRERVARKQLEIKFIS 2044

Query: 366  TENQLGDGFTKPLGKNKFTKFISTLVLE 449
            + +Q+ DGFTKPLG  +   F   L L+
Sbjct: 2045 SGDQVADGFTKPLGAPQLRNFRYNLNLD 2072


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  109 bits (273), Expect = 3e-22
 Identities = 57/147 (38%), Positives = 89/147 (60%)
 Frame = +3

Query: 6    DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
            DA++AG + + ++T G+ I L  NL+SW   KQ T+ +S TE+EY+A+ + T +IMW   
Sbjct: 1304 DADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQT 1363

Query: 186  LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
            LL    ++  K   I  DN GA  L  NP++H + K+I++  +F+RE+   +L +I  ++
Sbjct: 1364 LLAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVS 1423

Query: 366  TENQLGDGFTKPLGKNKFTKFISTLVL 446
            T +Q+ DGFTKPL       F S L L
Sbjct: 1424 TNDQVADGFTKPLSVRLLENFKSNLNL 1450


>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|31433472|gb|AAP54977.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1031

 Score =  109 bits (272), Expect = 4e-22
 Identities = 53/149 (35%), Positives = 92/149 (61%)
 Frame = +3

Query: 6    DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
            DA++AG + + ++T G+ + +  NL+SW   KQ T+ +S TEAEY+A+ + T +IMW   
Sbjct: 881  DADWAGCLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWIQT 940

Query: 186  LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
            LL    +++ K   +  DN GA  +  NP++H + K+I++  +F+RE+   +L  ++ I+
Sbjct: 941  LLHELGIQVPKIAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKLLQVEYIS 1000

Query: 366  TENQLGDGFTKPLGKNKFTKFISTLVLEG 452
            T++Q+ DGFTK L   +   F + L L G
Sbjct: 1001 TKDQVADGFTKTLSVRQLEMFRNNLNLTG 1029


>gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1762

 Score =  108 bits (269), Expect = 1e-21
 Identities = 54/147 (36%), Positives = 93/147 (63%)
 Frame = +3

Query: 6    DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
            DA++AG + + ++T G++I    NL+SW   KQRT+ +S TEAEY+A+ + T +++W   
Sbjct: 1613 DADWAGSLDDRRSTGGFVIYFGPNLVSWSARKQRTVSRSSTEAEYKAMANATAELIWVRS 1672

Query: 186  LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
            +L+   V+I++   +  DN GA  L  NP++H + K+I+I  +F++E+   ++ DI+ I 
Sbjct: 1673 VLEELGVKIDQSPVLWCDNLGATYLSSNPVFHARTKHIEIDYHFVQERVANKMLDIRFIG 1732

Query: 366  TENQLGDGFTKPLGKNKFTKFISTLVL 446
            T++Q+ DGFTK L       F+  L L
Sbjct: 1733 TKDQIADGFTKALSTQNLRHFMYNLNL 1759


>gb|EOY00074.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
          Length = 1494

 Score =  107 bits (268), Expect = 1e-21
 Identities = 53/145 (36%), Positives = 92/145 (63%)
 Frame = +3

Query: 6    DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
            DA++ G     ++T GY+I L  + +SW + KQ  + +S  EAEYRA+   + KI+W I+
Sbjct: 1207 DADWVGCPTTRRSTTGYIIFLGSSPISWQSKKQTVVSRSSAEAEYRAMATTSSKIIWLIR 1266

Query: 186  LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
            LL++ +V  +  V +  DN+ AI +  NP++HE+ K+I+I  +F+R+  + +    + IT
Sbjct: 1267 LLRDLQVPCSNPVPLFCDNQAAIHIAANPVFHERTKHIEIDCHFVRQHIQSQTLIPRPIT 1326

Query: 366  TENQLGDGFTKPLGKNKFTKFISTL 440
            ++ QL D FTK LG+++F + +S L
Sbjct: 1327 SKFQLADIFTKALGRDRFHELLSKL 1351


>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
            gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
            Japonica Group]
          Length = 821

 Score =  107 bits (267), Expect = 2e-21
 Identities = 57/150 (38%), Positives = 92/150 (61%)
 Frame = +3

Query: 6    DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
            DA++AG   + ++T G+ + L  NL+SW   KQ T+ +S TEAEY+A+ + T +IMW   
Sbjct: 666  DADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWVQT 725

Query: 186  LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
            LL+   VE  +   +  DN GA  L  NPI+H + K+I++  +F+RE+   +L +I  I+
Sbjct: 726  LLQELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYIS 785

Query: 366  TENQLGDGFTKPLGKNKFTKFISTLVLEGI 455
            T++Q+ DGFTK +   +   F + L LE +
Sbjct: 786  TKDQVADGFTKAIPVRQMEMFKNNLNLERV 815


>gb|EOY12080.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
           cacao]
          Length = 523

 Score =  106 bits (265), Expect = 3e-21
 Identities = 52/151 (34%), Positives = 92/151 (60%)
 Frame = +3

Query: 6   DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
           D ++AG     ++T GY+I L  + +SW   KQ  + +S  EAEYRA+   + KI+W I+
Sbjct: 370 DGDWAGCPTTRRSTTGYIIFLGSSPISWRLKKQTVVSRSSAEAEYRAMATTSTKIIWLIR 429

Query: 186 LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
           LL++ +V  +  V +  DN+ AI +  NP++HE+ K+++I  +F+ +  + +    + IT
Sbjct: 430 LLRDLQVPCSNPVPLFCDNQAAIHIAANPVFHERTKHVEIDCHFVHQHIQSQTLIPRPIT 489

Query: 366 TENQLGDGFTKPLGKNKFTKFISTLVLEGIH 458
           ++ QL D FTK LG+ +F + +S L +  +H
Sbjct: 490 SKFQLADIFTKALGRERFHELLSKLGVSTLH 520


>gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]
          Length = 1012

 Score =  106 bits (265), Expect = 3e-21
 Identities = 57/148 (38%), Positives = 90/148 (60%)
 Frame = +3

Query: 6    DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
            DA++AG + + ++T G+ + L  NL+SW   KQ T+ +S TEAEY+A+ + T +++W  +
Sbjct: 863  DADWAGCVDDRRSTGGFAVFLGNNLISWTAKKQPTVSRSSTEAEYKALANATAEMIWVQK 922

Query: 186  LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
            LL    V       +  DN GA  L  NPI+H + K+I+I  +F+RE+   +L +++ I+
Sbjct: 923  LLNELGVRHPPRARLWCDNLGATYLSANPIFHARTKHIEIDFHFVRERVAQKLLEVRFIS 982

Query: 366  TENQLGDGFTKPLGKNKFTKFISTLVLE 449
            T +QL DGFTK L   K  KF   L L+
Sbjct: 983  TGDQLADGFTKALPVIKLKKFRDNLNLQ 1010


>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
          Length = 1279

 Score =  106 bits (264), Expect = 4e-21
 Identities = 54/151 (35%), Positives = 89/151 (58%)
 Frame = +3

Query: 6    DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
            D+++AG   + ++T GY + L  +L+SW T +Q+T+  S  EAEYRA+     ++ W   
Sbjct: 1126 DSDWAGCPISRRSTTGYCVFLGSSLISWRTKRQKTVSLSSAEAEYRAMAGTCCELSWLRS 1185

Query: 186  LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
            LLK+ R+   K   +  DN  A+ +  NP++HE+ ++I++  +FIR++ +      K I 
Sbjct: 1186 LLKDLRILHPKPALLYCDNTAALHIAANPVFHERTRHIEMDCHFIRDKIQDGSVVTKHIA 1245

Query: 366  TENQLGDGFTKPLGKNKFTKFISTLVLEGIH 458
            + +QL D FTKPLGK  F+  I  L +  IH
Sbjct: 1246 STBQLADVFTKPLGKETFSTMIHKLGVLDIH 1276


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  105 bits (263), Expect = 5e-21
 Identities = 54/133 (40%), Positives = 84/133 (63%)
 Frame = +3

Query: 6    DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
            DA++AG I + K+T G+ + L  NL+SW   KQ T+ +S TEAEY+AV + T +++W   
Sbjct: 1296 DADWAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQT 1355

Query: 186  LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
            LLK   +E  K   I  DN GA  L  NP++H + K+I++  +F+RE+   +L +I  + 
Sbjct: 1356 LLKELGIESPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVP 1415

Query: 366  TENQLGDGFTKPL 404
            + +Q+ DGFTK L
Sbjct: 1416 SGDQVADGFTKAL 1428


>emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]
          Length = 1322

 Score =  105 bits (263), Expect = 5e-21
 Identities = 56/151 (37%), Positives = 89/151 (58%)
 Frame = +3

Query: 6    DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
            D+++AG   + ++T GY + L  +L+SW T +Q+T+  S  EAEYRA+     ++ W   
Sbjct: 1169 DSDWAGCPISRRSTTGYCVFLGSSLISWRTKRQKTVSLSSAEAEYRAMTGTCCELSWLRS 1228

Query: 186  LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
            LLK+ R+   K   +  DN  A+ +  NP++HE+ ++I++  +FIRE+ +      K I 
Sbjct: 1229 LLKDLRILHPKPALLYCDNTTALHIAANPVFHERTRHIEMDCHFIREKIQDGSFVTKHIA 1288

Query: 366  TENQLGDGFTKPLGKNKFTKFISTLVLEGIH 458
            + NQL D FTKPLGK  F+  I  L +  IH
Sbjct: 1289 STNQLADVFTKPLGKETFSTMIHKLGVLDIH 1319


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score =  105 bits (263), Expect = 5e-21
 Identities = 52/149 (34%), Positives = 90/149 (60%)
 Frame = +3

Query: 6    DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
            DA++AG + +  +T G+ + +  NL+SW   KQ T+ +S TEAEY+A+ ++T +IMW   
Sbjct: 1281 DADWAGCLDDRHSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANVTAEIMWIQT 1340

Query: 186  LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
            LL    ++  K   +  DN GA  +  NP++H + K+I++  +F+RE+   +   ++ I+
Sbjct: 1341 LLHELGIQAPKIAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKFLQVEYIS 1400

Query: 366  TENQLGDGFTKPLGKNKFTKFISTLVLEG 452
            T++Q+ DGFTK L   +   F + L L G
Sbjct: 1401 TKDQVADGFTKTLSVRQLEMFRNNLNLTG 1429


>gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1096

 Score =  105 bits (262), Expect = 6e-21
 Identities = 52/149 (34%), Positives = 92/149 (61%)
 Frame = +3

Query: 6    DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
            DA++AG + + ++T G+ + +  NL+SW   KQ T+ +S TEAEY+A+ + T +IMW   
Sbjct: 948  DADWAGCLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALENATAEIMWIQT 1007

Query: 186  LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
            LL    +++ K   +  DN GA  ++ NP+++ + K+I++  +F+RE+   +L  ++ I+
Sbjct: 1008 LLHELGIQVPKTAKVWCDNIGATYMIANPVFYARTKHIEVDYHFVRERVAQKLLQVEYIS 1067

Query: 366  TENQLGDGFTKPLGKNKFTKFISTLVLEG 452
            T +Q+ DGFTK L   +   F + L L G
Sbjct: 1068 TNDQVVDGFTKTLTVKQVEMFRNNLNLTG 1096


>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  105 bits (262), Expect = 6e-21
 Identities = 53/145 (36%), Positives = 85/145 (58%)
 Frame = +3

Query: 6    DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
            DA++AG I N  +T  Y++ L  N +SW + KQ+ + +S TEAEYRAV + T +I W   
Sbjct: 1299 DADWAGDIDNYNSTNAYILYLGSNPISWSSKKQKGVARSSTEAEYRAVANATSEIRWVCS 1358

Query: 186  LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
            LL    + ++    +  DN GA  L  NP++H ++K+I +  +F+RE  +     +  ++
Sbjct: 1359 LLTELGITLSSPPVVYCDNVGATYLSANPVFHSRMKHIALDFHFVRESVQAGALRVTHVS 1418

Query: 366  TENQLGDGFTKPLGKNKFTKFISTL 440
            T++QL D  TKPL +  FT  IS +
Sbjct: 1419 TKDQLADALTKPLPRQPFTTLISKI 1443


>gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indica Group]
          Length = 391

 Score =  105 bits (261), Expect = 8e-21
 Identities = 56/150 (37%), Positives = 91/150 (60%)
 Frame = +3

Query: 6   DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
           DA++AG   + ++T G+ + L  NL+SW   KQ T+ +S  EAEY+A+ + T +IMW   
Sbjct: 236 DADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSIEAEYKALANATAEIMWVQT 295

Query: 186 LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
           LL+   VE  +   +  DN GA  L  NPI+H + K+I++  +F+RE+   +L +I  I+
Sbjct: 296 LLQELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYIS 355

Query: 366 TENQLGDGFTKPLGKNKFTKFISTLVLEGI 455
           T++Q+ DGFTK +   +   F + L LE +
Sbjct: 356 TKDQVADGFTKAIPVRQMEMFKNNLNLERV 385


>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
            Group]
          Length = 1399

 Score =  105 bits (261), Expect = 8e-21
 Identities = 56/150 (37%), Positives = 91/150 (60%)
 Frame = +3

Query: 6    DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
            DA++AG   + ++T G+ + L  NL+SW   KQ T+ +S  EAEY+A+ + T +IMW   
Sbjct: 1244 DADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSIEAEYKALANATAEIMWVQT 1303

Query: 186  LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
            LL+   VE  +   +  DN GA  L  NPI+H + K+I++  +F+RE+   +L +I  I+
Sbjct: 1304 LLQELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYIS 1363

Query: 366  TENQLGDGFTKPLGKNKFTKFISTLVLEGI 455
            T++Q+ DGFTK +   +   F + L LE +
Sbjct: 1364 TKDQVADGFTKAIPVRQMEMFKNNLNLERV 1393


>gb|ABA95366.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 552

 Score =  104 bits (260), Expect = 1e-20
 Identities = 55/148 (37%), Positives = 89/148 (60%)
 Frame = +3

Query: 6   DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
           DA++AG + + ++T G+ + L  NL+SW   KQ T+ +S TEAEY+A+ D   +IMW   
Sbjct: 402 DADWAGCLDDRRSTGGFAVFLGSNLVSWSARKQTTVSRSSTEAEYKALADTKAEIMWLQT 461

Query: 186 LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
           LL    +E  K   +  DN GA  L  NP++H + K+I++  Y +RE+   +L +I+ I+
Sbjct: 462 LLYEIGIETPKAAKVWCDNVGAKYLSVNPMFHARTKHIEVDYYIVRERVSRKLLEIEYIS 521

Query: 366 TENQLGDGFTKPLGKNKFTKFISTLVLE 449
           +++Q+  GFTK L    F  F S L ++
Sbjct: 522 SKDQIAYGFTKSLTVRPFEVFKSNLNID 549


>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
          Length = 1087

 Score =  104 bits (260), Expect = 1e-20
 Identities = 58/147 (39%), Positives = 89/147 (60%)
 Frame = +3

Query: 6    DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
            DA++AG   + ++T G+ I L  NL+SW   KQ T+ +S TEAEY+A+ + T +++W   
Sbjct: 932  DADWAGCSDDRRSTGGFAIFLGFNLISWSARKQATVSRSSTEAEYKALANATAEVIWIQT 991

Query: 186  LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
            LLK   V   K   +  DN GA  L  NP++H + K+I++  +F+RE+   RL DI+ I+
Sbjct: 992  LLKELGVSQPKAAVLWCDNIGATYLSANPVFHARTKHIEVDYHFVRERVVQRLLDIRFIS 1051

Query: 366  TENQLGDGFTKPLGKNKFTKFISTLVL 446
            + +QL DGFTK    +K   F + L L
Sbjct: 1052 SGDQLADGFTKAQSLSKLQIFRNNLNL 1078


>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
          Length = 1131

 Score =  104 bits (260), Expect = 1e-20
 Identities = 58/147 (39%), Positives = 89/147 (60%)
 Frame = +3

Query: 6    DANYAGKIANGKATIGYMITLKENLLSWVT*KQRTILKSITEAEYRAVGDLTLKIMWFIQ 185
            DA++AG   + ++T G+ I L  NL+SW   KQ T+ +S TEAEY+A+ + T +++W   
Sbjct: 766  DADWAGCSDDRRSTGGFAIFLGFNLISWSARKQATVSRSSTEAEYKALANATAEVIWIQT 825

Query: 186  LLKNCRVEINK*VSISSDNEGAIKLVKNPIYHEKIKYIKIQAYFIREQYK*RLTDIKKIT 365
            LLK   V   K   +  DN GA  L  NP++H + K+I++  +F+RE+   RL DI+ I+
Sbjct: 826  LLKELGVSQPKAAVLWCDNIGATYLSANPVFHARTKHIEVDYHFVRERVVQRLLDIRFIS 885

Query: 366  TENQLGDGFTKPLGKNKFTKFISTLVL 446
            + +QL DGFTK    +K   F + L L
Sbjct: 886  SGDQLADGFTKAQSLSKLRIFRNNLNL 912