BLASTX nr result
ID: Ephedra27_contig00029293
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00029293
(539 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa] 174 9e-42
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana] 173 3e-41
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc... 171 8e-41
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 171 8e-41
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g... 171 1e-40
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 171 1e-40
gb|ABA95797.1| retrotransposon protein, putative, unclassified [... 170 2e-40
emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera] 169 3e-40
emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera] 169 4e-40
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 169 5e-40
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-... 169 5e-40
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 169 5e-40
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc... 168 6e-40
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 168 8e-40
emb|CAN62636.1| hypothetical protein VITISV_006313 [Vitis vinifera] 167 1e-39
emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera] 167 1e-39
gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group... 166 3e-39
ref|YP_514636.1| hypothetical protein OrsaiPp07 [Oryza sativa In... 166 4e-39
gb|ABA99232.1| retrotransposon protein, putative, Ty1-copia subc... 166 4e-39
emb|CAN68682.1| hypothetical protein VITISV_024814 [Vitis vinifera] 166 4e-39
>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
Length = 1180
Score = 174 bits (442), Expect = 9e-42
Identities = 90/176 (51%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Frame = -1
Query: 521 TWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFAPTTSI 342
TWEL+ P+ K+ +GCRWVYT+KH +G +D+YK RLVAK + QK G+D ETFAP I
Sbjct: 698 TWELVSLPQGKKTVGCRWVYTVKHNSDGSVDRYKARLVAKGYTQKYGVDYDETFAPVAKI 757
Query: 341 ITIRMLLKLATNKGWNVFHLDVKNAFLHGKL-EEVYMIQPPGY--NQNEELACKLKKSLY 171
TIR+LL LA N W + DVKNAFLHG L EEVYM PPGY + E++ CKLKKSLY
Sbjct: 758 NTIRVLLSLAANLDWPLQQFDVKNAFLHGDLHEEVYMDLPPGYGTSTGEQVVCKLKKSLY 817
Query: 170 GLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIIITG 3
GLK +PR + R T F++ G++ D L+ K G+ L +VDD+++TG
Sbjct: 818 GLKQSPRAWFGRFTKFMKKIGYRQSNSDHTLFL--KHRCGKVTALIIYVDDMVVTG 871
>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
Length = 1453
Score = 173 bits (438), Expect = 3e-41
Identities = 85/176 (48%), Positives = 122/176 (69%), Gaps = 3/176 (1%)
Frame = -1
Query: 521 TWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFAPTTSI 342
TW L++P + ++GCRWV+ K P+G +DK K RLVAK F+Q++G+D ETF+P
Sbjct: 914 TWSLVQPTEDMNILGCRWVFKTKLKPDGSVDKLKARLVAKGFHQEEGLDYLETFSPVVRT 973
Query: 341 ITIRMLLKLATNKGWNVFHLDVKNAFLHGKLEE-VYMIQPPGYNQNEE--LACKLKKSLY 171
TIR++L +AT KGWN+ LDV NAFLHG+L+E VYM+QPPG+ E+ C+L K+LY
Sbjct: 974 ATIRLVLDVATAKGWNIKQLDVSNAFLHGELKEPVYMLQPPGFVDQEKPSYVCRLTKALY 1033
Query: 170 GLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIIITG 3
GLK APR + ++N+L + GF K DP+L+ K G+ ++L +VDDI++TG
Sbjct: 1034 GLKQAPRAWFDTISNYLLDFGFSCSKSDPSLFTYHK--NGKTLVLLLYVDDILLTG 1087
>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1241
Score = 171 bits (434), Expect = 8e-41
Identities = 89/179 (49%), Positives = 119/179 (66%), Gaps = 3/179 (1%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L + +TW L+ P K + VI C+WVY +K +G +D+YK RLVAK F Q+ GID ++TF+
Sbjct: 854 LIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFS 913
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKL-EEVYMIQPPGYNQNE--ELACKL 186
P TIR++L LA ++GW++ LDVKNAFLHG L EEVYM QPPGY + CKL
Sbjct: 914 PVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPPGYEKKSMPNYVCKL 973
Query: 185 KKSLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIII 9
K+LYGLK APR Y+RL+ L GF K D +L++ KKG+ + L +VDDII+
Sbjct: 974 DKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVS--IFLLIYVDDIIV 1030
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 171 bits (434), Expect = 8e-41
Identities = 89/179 (49%), Positives = 119/179 (66%), Gaps = 3/179 (1%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L + +TW L+ P K + VI C+WVY +K +G +D+YK RLVAK F Q+ GID ++TF+
Sbjct: 908 LIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFS 967
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKL-EEVYMIQPPGYNQNE--ELACKL 186
P TIR++L LA ++GW++ LDVKNAFLHG L EEVYM QPPGY + CKL
Sbjct: 968 PVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPPGYEKKSMPNYVCKL 1027
Query: 185 KKSLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIII 9
K+LYGLK APR Y+RL+ L GF K D +L++ KKG+ + L +VDDII+
Sbjct: 1028 DKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVS--IFLLIYVDDIIV 1084
>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
Japonica Group]
Length = 821
Score = 171 bits (432), Expect = 1e-40
Identities = 89/179 (49%), Positives = 119/179 (66%), Gaps = 3/179 (1%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L + +TW L+ P K + VI C+WVY +K +G +D+YK RLVAK F Q+ GID ++TF+
Sbjct: 330 LIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFS 389
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKL-EEVYMIQPPGYNQNE--ELACKL 186
P TIR++L LA ++GW++ LDVKNAFLHG L EEVYM QPPGY + CKL
Sbjct: 390 PVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMEQPPGYEKKSMPNYVCKL 449
Query: 185 KKSLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIII 9
K+LYGLK APR Y+RL+ L GF K D +L++ KKG+ + L +VDDII+
Sbjct: 450 DKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVS--IFLLIYVDDIIM 506
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 171 bits (432), Expect = 1e-40
Identities = 88/179 (49%), Positives = 121/179 (67%), Gaps = 3/179 (1%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L +TW L+ P K + VIGC+WVY IK +G +D+YK RLVAK + Q+ GID +TF+
Sbjct: 828 LMKNKTWHLVPPKKGRNVIGCKWVYKIKRKADGSLDRYKARLVAKGYKQQYGIDYDDTFS 887
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKL-EEVYMIQPPGYNQNEEL--ACKL 186
P TIR++L +A ++GW++ LDV+NAFLHG L EEVYM QPPGY + +L CKL
Sbjct: 888 PVVKHATIRIILSIAVSRGWSLCQLDVQNAFLHGVLEEEVYMQQPPGYEDSTKLNYVCKL 947
Query: 185 KKSLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIII 9
K+LYGLK APR Y+RL+N L + GF+ K D +L++ KG + + +VDDII+
Sbjct: 948 DKALYGLKQAPRAWYSRLSNKLLSLGFQASKADTSLFFYNKGSV--TIFVLVYVDDIIV 1004
>gb|ABA95797.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1588
Score = 170 bits (431), Expect = 2e-40
Identities = 88/181 (48%), Positives = 116/181 (64%), Gaps = 3/181 (1%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L +TWEL+K P K +GC+WV+T+K P G++D+YK RLVAK + Q GID ETFA
Sbjct: 1102 LEKNKTWELVKLPMGKRAVGCKWVFTVKQTPEGKVDRYKARLVAKGYSQTYGIDYDETFA 1161
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKL-EEVYMIQPPGYNQNEEL--ACKL 186
P + T+R+L+ A N GW + LDVKNAFLHG L EEVYM PPG+ ++ + C+L
Sbjct: 1162 PVAKMSTVRILISCAVNFGWPLHQLDVKNAFLHGDLQEEVYMEIPPGFGNSQTVGKVCRL 1221
Query: 185 KKSLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIIIT 6
KKSLYGLK +PR + R L N G+ D ++Y +G ILA +VDDI+IT
Sbjct: 1222 KKSLYGLKQSPRAWFDRFRRALCNMGYSQCNGDHTVFYRHRG--AHITILAVYVDDIVIT 1279
Query: 5 G 3
G
Sbjct: 1280 G 1280
>emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]
Length = 1493
Score = 169 bits (429), Expect = 3e-40
Identities = 85/181 (46%), Positives = 123/181 (67%), Gaps = 3/181 (1%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L ETWE++ P+ K+ +GC+W++T+K+ +G +++YK RLVAK F Q GID ETFA
Sbjct: 1007 LEKNETWEVMNLPRGKKPVGCKWIFTVKYKADGTVERYKARLVAKGFTQTYGIDYTETFA 1066
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKL-EEVYMIQPPGYNQNEE--LACKL 186
P + TIR+LL LA N W + D+KNAFL+G+L EEV+M+ PPG+ + EE CKL
Sbjct: 1067 PVAKLNTIRVLLSLAANLDWPLHQFDIKNAFLNGELEEEVFMMLPPGFCKEEEETRVCKL 1126
Query: 185 KKSLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIIIT 6
KKSLYGLK +PR + R ++N+G++ + D +++ K+ GR IL +VDDII+T
Sbjct: 1127 KKSLYGLKQSPRAWFDRFAKVIKNQGYQQGQSDHTMFF-KQSNDGRMTILIVYVDDIILT 1185
Query: 5 G 3
G
Sbjct: 1186 G 1186
>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
Length = 1505
Score = 169 bits (428), Expect = 4e-40
Identities = 87/180 (48%), Positives = 120/180 (66%), Gaps = 2/180 (1%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L TWE++ PK K +GC+WV+T+K+ NG +++YK RLVAK F Q GID ETFA
Sbjct: 1018 LEKNHTWEVMGLPKGKTTVGCKWVFTVKYNSNGSLERYKARLVAKGFTQTYGIDYLETFA 1077
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKL-EEVYMIQPPGYNQN-EELACKLK 183
P + T+R+LL +A N W + LDVKNAFL+G L EEVYM PPG++++ CKLK
Sbjct: 1078 PVAKLNTVRVLLSIAANLDWPLQQLDVKNAFLNGNLEEEVYMDPPPGFDEHFGSKVCKLK 1137
Query: 182 KSLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIIITG 3
KSLYGLK +PR + R T F++N+G+ + D + ++K G+ IL +VDDII+TG
Sbjct: 1138 KSLYGLKQSPRAWFERFTQFVKNQGYVQAQSDHTM-FIKHSNDGKIAILIVYVDDIILTG 1196
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 169 bits (427), Expect = 5e-40
Identities = 88/179 (49%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L +TW L+ P + + +IGC+WVY IK +G +D+YK RLVAK F Q+ GID ++TF+
Sbjct: 968 LVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFS 1027
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKL-EEVYMIQPPGYNQ--NEELACKL 186
P TIR++L LA +KGW++ LDV+NAFLHG L EEVYM+QPPG+ CKL
Sbjct: 1028 PVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKL 1087
Query: 185 KKSLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIII 9
K+LYGLK APR ++RL+ L + GFK K D +L++L KG+ V++ +VDDII+
Sbjct: 1088 DKALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTSLFFLNKGDITMFVLV--YVDDIIV 1144
>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1621
Score = 169 bits (427), Expect = 5e-40
Identities = 88/179 (49%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L +TW L+ P + + +IGC+WVY IK +G +D+YK RLVAK F Q+ GID ++TF+
Sbjct: 690 LVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFS 749
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKL-EEVYMIQPPGYNQ--NEELACKL 186
P TIR++L LA +KGW++ LDV+NAFLHG L EEVYM+QPPG+ CKL
Sbjct: 750 PVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKL 809
Query: 185 KKSLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIII 9
K+LYGLK APR ++RL+ L + GFK K D +L++L KG+ V++ +VDDII+
Sbjct: 810 DKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKGDITMFVLV--YVDDIIV 866
>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 169 bits (427), Expect = 5e-40
Identities = 88/179 (49%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L +TW L+ P + + +IGC+WVY IK +G +D+YK RLVAK F Q+ GID ++TF+
Sbjct: 961 LVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFS 1020
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKL-EEVYMIQPPGYNQ--NEELACKL 186
P TIR++L LA +KGW++ LDV+NAFLHG L EEVYM+QPPG+ CKL
Sbjct: 1021 PVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKL 1080
Query: 185 KKSLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIII 9
K+LYGLK APR ++RL+ L + GFK K D +L++L KG+ V++ +VDDII+
Sbjct: 1081 DKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKGDITMFVLV--YVDDIIV 1137
>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 168 bits (426), Expect = 6e-40
Identities = 84/177 (47%), Positives = 116/177 (65%), Gaps = 1/177 (0%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L +TW L+ K + +I C+WVY +K +G +D+YK RLVAK F Q+ GID ++TF+
Sbjct: 809 LMKNKTWHLVPSKKGQNIIDCKWVYKVKQKADGSLDRYKARLVAKGFKQRYGIDYEDTFS 868
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKLEE-VYMIQPPGYNQNEELACKLKK 180
P TIR +L +A ++GW + LDV+NAFLHG LEE V+M QPPGY Q + CKL K
Sbjct: 869 PVVKAATIRTILSIAISRGWTLRQLDVQNAFLHGVLEEDVFMRQPPGYEQKDGYVCKLDK 928
Query: 179 SLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIII 9
+LYGLK APR Y+RL+ L GFK K D +L++ KG+ + + +VDDII+
Sbjct: 929 ALYGLKQAPRAWYSRLSTKLHELGFKSSKSDTSLFFYSKGDV--TIFMLVYVDDIIV 983
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 168 bits (425), Expect = 8e-40
Identities = 88/180 (48%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L + +TW L+ P K + VI C+WVY IK +G +D+YK RLVAK F Q+ GID ++TF+
Sbjct: 762 LQNNKTWHLVPPQKGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFS 821
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKL-EEVYMIQPPGYNQNE--ELACKL 186
P TIR++L +A +KGW + LDV+NAFLHG L EEVYM QPPGY + CKL
Sbjct: 822 PVVKAATIRIILSIAVSKGWCMRQLDVQNAFLHGVLEEEVYMKQPPGYEDSSLPGYVCKL 881
Query: 185 KKSLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIIIT 6
K+LYGLK APR Y+RL+ L + GF+ K D +L++ KG+ + + +VDDII+T
Sbjct: 882 DKALYGLKQAPRAWYSRLSKKLYDMGFQGSKADTSLFFYNKGD--LIIFVLIYVDDIIVT 939
>emb|CAN62636.1| hypothetical protein VITISV_006313 [Vitis vinifera]
Length = 1246
Score = 167 bits (423), Expect = 1e-39
Identities = 86/180 (47%), Positives = 119/180 (66%), Gaps = 2/180 (1%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L TWE++ PK K +GC+WV+T+K+ NG +++YK RLVAK F Q GID ETFA
Sbjct: 799 LEKNHTWEVMGLPKGKTTVGCKWVFTVKYNSNGSLERYKARLVAKGFTQTXGIDYLETFA 858
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKL-EEVYMIQPPGYNQN-EELACKLK 183
P + T+R+LL +A N W + LDVKNAFL+G L EEVYM PPG++++ CKLK
Sbjct: 859 PVAKLNTVRVLLSIAANLDWPLQQLDVKNAFLNGNLEEEVYMDPPPGFDEHFGSKVCKLK 918
Query: 182 KSLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIIITG 3
KSLYGLK +PR + T F++N+G+ + D + ++K G+ IL +VDDII+TG
Sbjct: 919 KSLYGLKQSPRAWFEXFTQFVKNQGYVQAQSDHTM-FIKHSNDGKIAILIVYVDDIILTG 977
>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
Length = 1312
Score = 167 bits (423), Expect = 1e-39
Identities = 84/181 (46%), Positives = 119/181 (65%), Gaps = 3/181 (1%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L +TW L+ PP ++IGC+WV+ +KH PNG ID+YK RLVA+ F+Q GID ETF+
Sbjct: 822 LLKNQTWSLVPPPSNAKIIGCKWVFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFS 881
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKL-EEVYMIQPPGYNQNE--ELACKL 186
P TIR++L +A + W + LDV NAFL+G L E+V+M+QPPG+ N C+L
Sbjct: 882 PVVKPCTIRLVLSIAVSSNWPIKQLDVHNAFLNGDLQEQVFMMQPPGFEDNSCPTHVCRL 941
Query: 185 KKSLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIIIT 6
+K+LYGLK APR + +L++FL GF+ + D +L+Y +IL +VDDI+IT
Sbjct: 942 QKALYGLKQAPRAWFHKLSSFLLQIGFQCSRADASLFYFHSASD--IIILLIYVDDILIT 999
Query: 5 G 3
G
Sbjct: 1000 G 1000
>gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711651|gb|ABF99446.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1393
Score = 166 bits (420), Expect = 3e-39
Identities = 87/181 (48%), Positives = 116/181 (64%), Gaps = 3/181 (1%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L +TWEL+K P K +GC+WV+T+K P G++D+YK RLVAK + Q GID ETFA
Sbjct: 907 LVKNKTWELVKLPPEKRAVGCKWVFTVKQTPEGKVDRYKARLVAKGYSQTYGIDYDETFA 966
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKL-EEVYMIQPPGYNQNEEL--ACKL 186
P + T+R L+ A N GW + LDVKNAFLHG L EEVYM PPG+ ++ + CKL
Sbjct: 967 PVAKMGTVRALVSCAVNFGWPLHQLDVKNAFLHGDLHEEVYMEIPPGFGNSQTVGKVCKL 1026
Query: 185 KKSLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIIIT 6
KKSLYGLK +PR + R + + + G+ D ++Y +G ILA +VDDI+IT
Sbjct: 1027 KKSLYGLKQSPRAWFDRFRHAVCDMGYSQCNGDHTVFYKHRGT--HITILAVYVDDIVIT 1084
Query: 5 G 3
G
Sbjct: 1085 G 1085
>ref|YP_514636.1| hypothetical protein OrsaiPp07 [Oryza sativa Indica Group]
gi|289065044|ref|YP_003433855.1| hypothetical protein
OrrupM_p18 [Oryza rufipogon] gi|74100111|gb|AAZ99275.1|
hypothetical protein (mitochondrion) [Oryza sativa
Indica Group] gi|74100166|gb|AAZ99329.1| hypothetical
protein (mitochondrion) [Oryza sativa Japonica Group]
gi|74100220|gb|AAZ99382.1| hypothetical protein
(mitochondrion) [Oryza sativa Japonica Group]
gi|285026126|dbj|BAI67959.1| hypothetical protein [Oryza
rufipogon] gi|285026155|dbj|BAI67987.1| hypothetical
protein [Oryza sativa Indica Group]
gi|353685219|gb|AER12982.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|353685288|gb|AER13050.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|374277649|gb|AEZ03755.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|374277659|gb|AEZ03764.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|528540457|dbj|BAN67511.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
gi|528540460|dbj|BAN67513.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
Length = 490
Score = 166 bits (419), Expect = 4e-39
Identities = 88/179 (49%), Positives = 118/179 (65%), Gaps = 3/179 (1%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L TW L+ + + +I C+WVY IK +G ID+YK RLVAK F Q+ GID +ETF+
Sbjct: 8 LMRNNTWHLVPATQGRNLIDCKWVYKIKRKADGTIDRYKARLVAKGFKQRYGIDYEETFS 67
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKLEE-VYMIQPPGYNQNEEL--ACKL 186
P TIR++L LA + GW++ LDV+NAFLHG LEE VYM QPPGY +L CKL
Sbjct: 68 PVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSKLDYVCKL 127
Query: 185 KKSLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIII 9
K+LYGLK APR ++RL+ L+N GF+ K D +L++ KKG + + +VDDII+
Sbjct: 128 DKALYGLKQAPRAWFSRLSMKLQNLGFQPSKADASLFFYKKGTIS--IFVLIYVDDIIV 184
>gb|ABA99232.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 308
Score = 166 bits (419), Expect = 4e-39
Identities = 88/179 (49%), Positives = 118/179 (65%), Gaps = 3/179 (1%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L TW L+ + + +I C+WVY IK +G ID+YK RLVAK F Q+ GID +ETF+
Sbjct: 8 LMRNNTWHLVPATQGRNLIDCKWVYKIKRKADGTIDRYKARLVAKGFKQRYGIDYEETFS 67
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKLEE-VYMIQPPGYNQNEEL--ACKL 186
P TIR++L LA + GW++ LDV+NAFLHG LEE VYM QPPGY +L CKL
Sbjct: 68 PVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSKLDYVCKL 127
Query: 185 KKSLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIII 9
K+LYGLK APR ++RL+ L+N GF+ K D +L++ KKG + + +VDDII+
Sbjct: 128 DKALYGLKQAPRAWFSRLSMKLQNLGFQPSKADASLFFYKKGTIS--IFVLIYVDDIIV 184
>emb|CAN68682.1| hypothetical protein VITISV_024814 [Vitis vinifera]
Length = 1248
Score = 166 bits (419), Expect = 4e-39
Identities = 84/181 (46%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Frame = -1
Query: 536 LSDRETWELIKPPKYKEVIGCRWVYTIKHLPNGEIDKYKVRLVAKDFYQKKGID*KETFA 357
L +TWEL+K P K+ +GC+WVYT+K+ +G I++YK RLVAK + Q GID +ETFA
Sbjct: 793 LEKNKTWELVKLPTGKKPVGCKWVYTVKYRADGSIERYKARLVAKGYAQTYGIDYQETFA 852
Query: 356 PTTSIITIRMLLKLATNKGWNVFHLDVKNAFLHGKL-EEVYMIQPPGYNQN--EELACKL 186
P + T+R+LL L N W++ DVKNAFLHG+L EE+YM PPGY+ N + CKL
Sbjct: 853 PVAKMNTVRVLLSLTANYNWDLQQFDVKNAFLHGELEEEIYMEVPPGYDNNLAAHIVCKL 912
Query: 185 KKSLYGLK*APRIRYTRLTNFLRNKGFKIFK*DPNLWYLKKGEQGRPVILAFHVDDIIIT 6
KK+LYGLK +PR + R + G++ + D ++ ++K R L +VDDII+T
Sbjct: 913 KKALYGLKQSPRAWFGRFARVIITMGYRQSQGD-HMLFIKHSSSRRLTALLVYVDDIIVT 971
Query: 5 G 3
G
Sbjct: 972 G 972