BLASTX nr result
ID: Ephedra27_contig00029271
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00029271
(417 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containi... 86 1e-16
ref|XP_006378364.1| hypothetical protein POPTR_0010s08940g [Popu... 84 4e-16
emb|CBI26347.3| unnamed protein product [Vitis vinifera] 86 5e-15
ref|XP_004496078.1| PREDICTED: pentatricopeptide repeat-containi... 86 7e-15
gb|ESW16173.1| hypothetical protein PHAVU_007G135000g [Phaseolus... 84 1e-14
ref|XP_002517032.1| pentatricopeptide repeat-containing protein,... 84 1e-14
ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 84 2e-14
ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_003535468.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
ref|XP_004297989.1| PREDICTED: pentatricopeptide repeat-containi... 83 3e-14
gb|EXB44177.1| hypothetical protein L484_010283 [Morus notabilis] 82 7e-14
ref|XP_003555488.1| PREDICTED: pentatricopeptide repeat-containi... 82 7e-14
gb|EOY05859.1| Tetratricopeptide repeat (TPR)-like superfamily p... 82 1e-13
gb|EMJ28245.1| hypothetical protein PRUPE_ppa001385mg [Prunus pe... 81 1e-13
ref|XP_006362174.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-13
ref|XP_004247685.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-13
ref|XP_006300678.1| hypothetical protein CARUB_v10019718mg [Caps... 80 4e-13
ref|XP_003591641.1| Pentatricopeptide repeat-containing protein ... 80 4e-13
ref|NP_177512.1| pentatricopeptide repeat-containing protein [Ar... 79 5e-13
ref|XP_002887500.1| pentatricopeptide repeat-containing protein ... 79 5e-13
>ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 85.5 bits (210), Expect(2) = 1e-16
Identities = 42/70 (60%), Positives = 49/70 (70%)
Frame = -2
Query: 212 SCSSYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLF 33
S +YN +ID YGKAG+LREA F ML+ G+ PNTVTFNTMIH CG G+L +A L
Sbjct: 324 SSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLM 383
Query: 32 GKMEELSCVP 3
KMEEL C P
Sbjct: 384 QKMEELRCPP 393
Score = 26.2 bits (56), Expect(2) = 1e-16
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 417 FRNSGEHEKADKIYQDW-LSQSLNHYKGIIHPCKTQNAENVSQ 292
++ +GE +KA++ +++W L ++L P T E+ SQ
Sbjct: 276 YKKAGEFKKAEQFFKNWSLGKTLKDEGKTSEPTATSAVESASQ 318
>ref|XP_006378364.1| hypothetical protein POPTR_0010s08940g [Populus trichocarpa]
gi|550329405|gb|ERP56161.1| hypothetical protein
POPTR_0010s08940g [Populus trichocarpa]
Length = 845
Score = 84.3 bits (207), Expect(2) = 4e-16
Identities = 41/70 (58%), Positives = 49/70 (70%)
Frame = -2
Query: 212 SCSSYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLF 33
S +YN +ID YGKAG+L+EA F KML+ G+ P TVTFNTMIH CG G+L +A L
Sbjct: 317 SSYTYNTLIDTYGKAGQLKEASETFAKMLREGIVPTTVTFNTMIHICGNHGQLEEAGSLM 376
Query: 32 GKMEELSCVP 3
KMEEL C P
Sbjct: 377 QKMEELRCPP 386
Score = 25.8 bits (55), Expect(2) = 4e-16
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 417 FRNSGEHEKADKIYQDW-LSQSLNHYKGIIHPCKTQNAENVS 295
++ +GE +KA++ +++W L +S+ H QN VS
Sbjct: 272 YKKAGEFQKAEEFFKNWTLGESIKHEGTSKASAGVQNGVQVS 313
>emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 85.9 bits (211), Expect = 5e-15
Identities = 48/91 (52%), Positives = 55/91 (60%)
Frame = -2
Query: 275 KMLQFF*ISS*LMIMDPLSVWSCSSYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVT 96
K QFF S P S +YN +ID YGKAG+LREA F ML+ G+ PNTVT
Sbjct: 284 KAEQFFKNWSLESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVT 343
Query: 95 FNTMIHNCGTQGKLSDAVVLFGKMEELSCVP 3
FNTMIH CG G+L +A L KMEEL C P
Sbjct: 344 FNTMIHICGNHGQLEEAASLMQKMEELRCPP 374
>ref|XP_004496078.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Cicer arietinum]
Length = 825
Score = 85.5 bits (210), Expect = 7e-15
Identities = 41/67 (61%), Positives = 47/67 (70%)
Frame = -2
Query: 203 SYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLFGKM 24
+YN +ID YGKAG+L+EA F KMLK GV P TVTFNTMIH CG G+L + L KM
Sbjct: 286 TYNTLIDTYGKAGQLKEASETFVKMLKQGVPPTTVTFNTMIHICGNHGRLEEVSSLLQKM 345
Query: 23 EELSCVP 3
EEL C P
Sbjct: 346 EELQCSP 352
>gb|ESW16173.1| hypothetical protein PHAVU_007G135000g [Phaseolus vulgaris]
Length = 823
Score = 84.3 bits (207), Expect = 1e-14
Identities = 41/71 (57%), Positives = 49/71 (69%)
Frame = -2
Query: 215 WSCSSYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVL 36
+S +YN +ID YGKAG+L+EA F +MLK GV P TVTFNTMIH CG G+L + L
Sbjct: 281 FSSHTYNTLIDTYGKAGQLKEASETFMEMLKRGVAPTTVTFNTMIHICGNHGQLEEVSSL 340
Query: 35 FGKMEELSCVP 3
KMEEL C P
Sbjct: 341 VQKMEELRCSP 351
>ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543667|gb|EEF45195.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 875
Score = 84.3 bits (207), Expect = 1e-14
Identities = 39/70 (55%), Positives = 50/70 (71%)
Frame = -2
Query: 212 SCSSYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLF 33
S +YN +ID YGKAG+++EA IF +ML+ + P TVTFNTMIH CG QG+L + +L
Sbjct: 329 SSHTYNTMIDTYGKAGQIKEASDIFAEMLRKRILPTTVTFNTMIHICGNQGQLEEVALLM 388
Query: 32 GKMEELSCVP 3
KMEEL C P
Sbjct: 389 QKMEELRCPP 398
>ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g23020-like [Cucumis sativus]
Length = 859
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/70 (58%), Positives = 47/70 (67%)
Frame = -2
Query: 212 SCSSYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLF 33
S +YN +ID YGKAG+L+EA F MLK GV P TVTFNTMIH CG G+L + L
Sbjct: 316 STYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLM 375
Query: 32 GKMEELSCVP 3
KMEEL C P
Sbjct: 376 QKMEELQCPP 385
>ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Cucumis sativus]
Length = 858
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/70 (58%), Positives = 47/70 (67%)
Frame = -2
Query: 212 SCSSYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLF 33
S +YN +ID YGKAG+L+EA F MLK GV P TVTFNTMIH CG G+L + L
Sbjct: 315 STYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLM 374
Query: 32 GKMEELSCVP 3
KMEEL C P
Sbjct: 375 QKMEELQCPP 384
>ref|XP_003535468.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 813
Score = 83.6 bits (205), Expect = 3e-14
Identities = 40/67 (59%), Positives = 48/67 (71%)
Frame = -2
Query: 203 SYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLFGKM 24
+YN +ID YGKAG+L+EA F KMLK GV P TVTFNTMI+ CG G+L + +L KM
Sbjct: 275 TYNTLIDTYGKAGQLKEASETFAKMLKQGVAPTTVTFNTMINICGNHGQLEEVSLLVRKM 334
Query: 23 EELSCVP 3
EEL C P
Sbjct: 335 EELRCSP 341
>ref|XP_004297989.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Fragaria vesca subsp. vesca]
Length = 840
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/70 (57%), Positives = 49/70 (70%)
Frame = -2
Query: 212 SCSSYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLF 33
S +YN +ID +GKAGRL+EA IF ML+ G+ P TVTFNTMIH CG G+LS+ L
Sbjct: 298 SSHTYNTLIDTHGKAGRLKEASEIFALMLREGIAPTTVTFNTMIHICGNHGQLSEVDSLM 357
Query: 32 GKMEELSCVP 3
KMEE+ C P
Sbjct: 358 QKMEEVRCPP 367
>gb|EXB44177.1| hypothetical protein L484_010283 [Morus notabilis]
Length = 857
Score = 82.0 bits (201), Expect = 7e-14
Identities = 39/70 (55%), Positives = 48/70 (68%)
Frame = -2
Query: 212 SCSSYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLF 33
S +YN +ID YGKAG+L+EA +F +ML+ G P TVTFNTMIH CG G+L + L
Sbjct: 315 SSHTYNMLIDTYGKAGQLKEASEVFAQMLREGKAPTTVTFNTMIHICGNNGQLEEVNSLM 374
Query: 32 GKMEELSCVP 3
KMEEL C P
Sbjct: 375 RKMEELRCPP 384
>ref|XP_003555488.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 821
Score = 82.0 bits (201), Expect = 7e-14
Identities = 39/67 (58%), Positives = 48/67 (71%)
Frame = -2
Query: 203 SYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLFGKM 24
+YN +ID YGKAG+L+EA F +MLK GV P TVTFNTMI+ CG G+L + +L KM
Sbjct: 283 TYNTLIDTYGKAGQLKEASQTFVEMLKQGVAPTTVTFNTMINICGNHGRLEEVSLLVRKM 342
Query: 23 EELSCVP 3
EEL C P
Sbjct: 343 EELRCSP 349
>gb|EOY05859.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 856
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/70 (55%), Positives = 48/70 (68%)
Frame = -2
Query: 212 SCSSYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLF 33
S +YN +ID YGKAG+L+EA F ML+ G+ P TVTFNTMIH CG GKL + L
Sbjct: 311 SSYTYNTLIDTYGKAGQLQEASETFEMMLREGIVPTTVTFNTMIHICGNHGKLEEVASLM 370
Query: 32 GKMEELSCVP 3
KMEE+ C+P
Sbjct: 371 KKMEEVQCLP 380
>gb|EMJ28245.1| hypothetical protein PRUPE_ppa001385mg [Prunus persica]
Length = 841
Score = 81.3 bits (199), Expect = 1e-13
Identities = 37/68 (54%), Positives = 47/68 (69%)
Frame = -2
Query: 212 SCSSYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLF 33
S +YN +ID YGKAG+L+EA IF ML+ G+ P TVTFNTM+H CG G+L + L
Sbjct: 299 SSHTYNTLIDTYGKAGQLKEASEIFATMLREGIAPTTVTFNTMMHICGNHGRLEEVASLM 358
Query: 32 GKMEELSC 9
KMEE+ C
Sbjct: 359 QKMEEIRC 366
>ref|XP_006362174.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Solanum tuberosum]
Length = 959
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/70 (51%), Positives = 48/70 (68%)
Frame = -2
Query: 212 SCSSYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLF 33
S +YN +ID YGKAG+++EA+ F +ML+ G+ P TVTFNTMIH CG G++ + L
Sbjct: 412 SSHTYNNLIDTYGKAGQVKEAYETFHQMLREGILPTTVTFNTMIHMCGNNGRMEEVASLM 471
Query: 32 GKMEELSCVP 3
KME L C P
Sbjct: 472 RKMEGLQCHP 481
>ref|XP_004247685.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Solanum lycopersicum]
Length = 966
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/70 (51%), Positives = 48/70 (68%)
Frame = -2
Query: 212 SCSSYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLF 33
S +YN +ID YGKAG+++EA+ F +ML+ G+ P TVTFNTMIH CG G++ + L
Sbjct: 419 SSHTYNNLIDTYGKAGQVKEAYETFHQMLREGILPTTVTFNTMIHMCGNNGRMEEVASLM 478
Query: 32 GKMEELSCVP 3
KME L C P
Sbjct: 479 RKMEGLQCHP 488
>ref|XP_006300678.1| hypothetical protein CARUB_v10019718mg [Capsella rubella]
gi|565486079|ref|XP_006300679.1| hypothetical protein
CARUB_v10019718mg [Capsella rubella]
gi|482569388|gb|EOA33576.1| hypothetical protein
CARUB_v10019718mg [Capsella rubella]
gi|482569389|gb|EOA33577.1| hypothetical protein
CARUB_v10019718mg [Capsella rubella]
Length = 986
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/68 (58%), Positives = 48/68 (70%)
Frame = -2
Query: 206 SSYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLFGK 27
S++N +ID YGKAGRL +A +F +MLK GV +TVTFNTMIH CGT G LS+A L K
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVAIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 26 MEELSCVP 3
MEE P
Sbjct: 366 MEEKGISP 373
>ref|XP_003591641.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|92882355|gb|ABE86686.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355480689|gb|AES61892.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 827
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/67 (56%), Positives = 45/67 (67%)
Frame = -2
Query: 203 SYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLFGKM 24
+YN +ID YGKAG+ +EA F KMLK G+ P TVTFNTMIH CG G+L + L KM
Sbjct: 287 TYNTLIDTYGKAGQHKEASETFAKMLKQGIPPTTVTFNTMIHICGNHGRLEEVSSLLRKM 346
Query: 23 EELSCVP 3
EL C P
Sbjct: 347 GELRCSP 353
>ref|NP_177512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169780|sp|Q9C9U0.1|PP118_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g73710 gi|12324197|gb|AAG52063.1|AC012679_1
hypothetical protein; 49134-52109 [Arabidopsis thaliana]
gi|332197379|gb|AEE35500.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 991
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/68 (58%), Positives = 48/68 (70%)
Frame = -2
Query: 206 SSYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLFGK 27
S++N +ID YGKAGRL +A +F +MLK GV +TVTFNTMIH CGT G LS+A L K
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 26 MEELSCVP 3
MEE P
Sbjct: 366 MEEKGISP 373
>ref|XP_002887500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297333341|gb|EFH63759.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 989
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/68 (58%), Positives = 48/68 (70%)
Frame = -2
Query: 206 SSYNKVIDRYGKAGRLREAFAIFCKMLKLGVRPNTVTFNTMIHNCGTQGKLSDAVVLFGK 27
S++N +ID YGKAGRL +A +F +MLK GV +TVTFNTMIH CGT G LS+A L K
Sbjct: 303 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 362
Query: 26 MEELSCVP 3
MEE P
Sbjct: 363 MEEKGISP 370