BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00029171
         (448 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsi...    56   6e-06
gb|EFA07744.1| hypothetical protein TcasGA2_TC002224 [Tribolium ...    55   7e-06
ref|XP_969432.2| PREDICTED: similar to Copia protein (Gag-int-po...    55   7e-06
gb|EFA07743.1| hypothetical protein TcasGA2_TC002223 [Tribolium ...    55   7e-06

>gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 822

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/53 (49%), Positives = 37/53 (69%)
 Frame = -1

Query: 160 KCETLVQNQTSSKLITLRIDNGTELLSKEVTDYYK*KGITRELTTPYNPQQNE 2
           K + LV+N  + ++  LRID GTE LSKE +++ +  GI R+LT  Y+PQQNE
Sbjct: 269 KFKNLVENNANCRIKKLRIDRGTEYLSKEFSEFLEGNGIERQLTAAYSPQQNE 321


>gb|EFA07744.1| hypothetical protein TcasGA2_TC002224 [Tribolium castaneum]
          Length = 2378

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/48 (50%), Positives = 34/48 (70%)
 Frame = -1

Query: 148 LVQNQTSSKLITLRIDNGTELLSKEVTDYYK*KGITRELTTPYNPQQN 5
           L++NQ    +  L+ DNGTE  +KE+ +Y K +GI+R LT PYNP+QN
Sbjct: 491 LIENQIGKSVKCLQSDNGTEYTNKELDEYLKKRGISRRLTAPYNPEQN 538



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/48 (50%), Positives = 34/48 (70%)
 Frame = -1

Query: 148  LVQNQTSSKLITLRIDNGTELLSKEVTDYYK*KGITRELTTPYNPQQN 5
            L++NQ    +  L+ DNGTE  +KE+ +Y K +GI+R LT PYNP+QN
Sbjct: 1696 LIENQIGKSVKCLQSDNGTEYTNKELDEYLKKRGISRRLTAPYNPEQN 1743


>ref|XP_969432.2| PREDICTED: similar to Copia protein (Gag-int-pol protein)
           [Tribolium castaneum]
          Length = 1360

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/48 (50%), Positives = 34/48 (70%)
 Frame = -1

Query: 148 LVQNQTSSKLITLRIDNGTELLSKEVTDYYK*KGITRELTTPYNPQQN 5
           L++NQ    +  L+ DNGTE  +KE+ +Y K +GI+R LT PYNP+QN
Sbjct: 531 LIENQIGKSVKCLQSDNGTEYTNKELDEYLKKRGISRRLTAPYNPEQN 578


>gb|EFA07743.1| hypothetical protein TcasGA2_TC002223 [Tribolium castaneum]
          Length = 1384

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/48 (50%), Positives = 34/48 (70%)
 Frame = -1

Query: 148 LVQNQTSSKLITLRIDNGTELLSKEVTDYYK*KGITRELTTPYNPQQN 5
           L++NQ    +  L+ DNGTE  +KE+ +Y K +GI+R LT PYNP+QN
Sbjct: 531 LIENQIGKSVKCLQSDNGTEYTNKELDEYLKKRGISRRLTAPYNPEQN 578