BLASTX nr result

ID: Ephedra27_contig00029084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00029084
         (1152 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002991140.1| hypothetical protein SELMODRAFT_448311 [Sela...    59   5e-06

>ref|XP_002991140.1| hypothetical protein SELMODRAFT_448311 [Selaginella moellendorffii]
            gi|300141071|gb|EFJ07786.1| hypothetical protein
            SELMODRAFT_448311 [Selaginella moellendorffii]
          Length = 716

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 55/204 (26%), Positives = 84/204 (41%), Gaps = 18/204 (8%)
 Frame = +2

Query: 251  DTKMKHRYTGRSRMSHPKVIARNAQLPFKLFHERGSVFQGDWDKLHNQNLRR--RDNVNE 424
            D +    +T R R        R        FH+          +L++ + RR  R+  NE
Sbjct: 472  DDRFPREFTDRERHRDDFSRGRERDRAQNYFHQA---------RLNSSSGRRSSRERSNE 522

Query: 425  DFKITH---------SGNKKDRNQVNLSLPPKPHFRKFG----NRFGSNDSVDFAKPKTL 565
             F   H          G + DR  V  + PP    R FG     R G  +  DFA PK+L
Sbjct: 523  RFHHRHPPPDAFMYRGGGQIDRRPVKDASPPGYEARNFGLGFSRRTGGEEPSDFAAPKSL 582

Query: 566  EQIKEEKRKADFQG-SICSDSELGF--GTAKEDSNQVFITNSNKALSFEGPKPLTAILKN 736
             QI+ EKRK D +  ++ S S+  +    +K    ++     +    FEGPKPL  ILK+
Sbjct: 583  AQIRAEKRKLDGEEVAMVSSSKRSYISRESKFHGGELNGGGDDGDQHFEGPKPLHEILKD 642

Query: 737  RKKSSFFEVNGKSADIHTEEDNIE 808
            +++  F ++      +    D  E
Sbjct: 643  KRREEFSQLRRHDESVIVASDERE 666


Top