BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00028997
         (568 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS73675.1| hypothetical protein M569_01080 [Genlisea aurea]       145   7e-33
ref|XP_006299802.1| hypothetical protein CARUB_v10015998mg, part...   139   4e-31
gb|ESW06544.1| hypothetical protein PHAVU_010G056500g [Phaseolus...   137   2e-30
ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutr...   137   2e-30
gb|EXC35267.1| hypothetical protein L484_026589 [Morus notabilis]     136   3e-30
ref|XP_002884075.1| pentatricopeptide repeat-containing protein ...   136   3e-30
ref|NP_565422.1| pentatricopeptide repeat-containing protein [Ar...   135   6e-30
gb|AAM62704.1| unknown [Arabidopsis thaliana]                         135   6e-30
ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containi...   135   9e-30
ref|XP_003635566.1| PREDICTED: pentatricopeptide repeat-containi...   135   9e-30
gb|ADE76512.1| unknown [Picea sitchensis]                             135   9e-30
emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]   135   9e-30
ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily p...   134   1e-29
ref|XP_006425315.1| hypothetical protein CICLE_v10025555mg [Citr...   134   2e-29
gb|EMJ05384.1| hypothetical protein PRUPE_ppa015299mg [Prunus pe...   134   2e-29
ref|XP_002306437.1| pentatricopeptide repeat-containing family p...   133   4e-29
ref|XP_002521681.1| pentatricopeptide repeat-containing protein,...   132   5e-29
ref|XP_006857185.1| hypothetical protein AMTR_s00065p00182300 [A...   132   6e-29
ref|XP_003626687.1| Pentatricopeptide repeat-containing protein ...   132   8e-29

>gb|EPS73675.1| hypothetical protein M569_01080 [Genlisea aurea]
          Length = 469

 Score =  145 bits (366), Expect = 7e-33
 Identities = 75/171 (43%), Positives = 104/171 (60%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CN+   K++ +AM L   + + G  PDRYVY T+M G+  LN   E L VYK M ++  +
Sbjct: 246 CNS---KNLREAMRLLSVLSEEGYKPDRYVYNTIMKGYCTLNQGGEVLGVYKKMQDERIE 302

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PD VT NTLI   C++G+   A + +  M EKG  PDVFTYTSLMNG+CR G + EA+  
Sbjct: 303 PDNVTYNTLIFGLCKSGRWSYAKKFLGVMNEKGLSPDVFTYTSLMNGMCRGGNISEAMAL 362

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L+EM+    +PN  TYNTLL GL ++  + +AV+ F+ M    I +    Y
Sbjct: 363 LEEMESRECKPNSHTYNTLLQGLCKAGMLDKAVEVFQVMKNGSIELGTGSY 413



 Score = 68.9 bits (167), Expect = 8e-10
 Identities = 42/130 (32%), Positives = 61/130 (46%)
 Frame = -2

Query: 540 SKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTL 361
           S A      M + GLSPD + Y +LMNG  +     EA+ + + M    CKP+  T NTL
Sbjct: 322 SYAKKFLGVMNEKGLSPDVFTYTSLMNGMCRGGNISEAMALLEEMESRECKPNSHTYNTL 381

Query: 360 IMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMKRVGI 181
           +   C+ G  D+A+E  + M     +    +Y S +  LCR+G+V  A    D       
Sbjct: 382 LQGLCKAGMLDKAVEVFQVMKNGSIELGTGSYGSFLRALCRKGKVAVAYEVFDYAVDSKS 441

Query: 180 RPNEKTYNTL 151
            P    Y+TL
Sbjct: 442 FPTVSAYSTL 451



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 42/169 (24%), Positives = 77/169 (45%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           C++   + +S    +   M+D+G  P++   +  +    +    + A+E+ K +S     
Sbjct: 138 CSSADEQSVSGVHGILNLMKDSGFPPNQSSASIAVRALCESGREEHAVELVKELSTKNLP 197

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PD  T NTL+    +N         VK+M E G KP + TYT +++ +C    + EA+  
Sbjct: 198 PDEHTYNTLVKHLVKNRSLSSVNCFVKDMREFGVKPTLITYTIMIDNVCNSKNLREAMRL 257

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRD 61
           L  +   G +P+   YNT++ G    +     +  ++ M   D RI  D
Sbjct: 258 LSVLSEEGYKPDRYVYNTIMKGYCTLNQGGEVLGVYKKM--QDERIEPD 304


>ref|XP_006299802.1| hypothetical protein CARUB_v10015998mg, partial [Capsella rubella]
           gi|482568511|gb|EOA32700.1| hypothetical protein
           CARUB_v10015998mg, partial [Capsella rubella]
          Length = 408

 Score =  139 bits (351), Expect = 4e-31
 Identities = 70/171 (40%), Positives = 109/171 (63%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CN+   K + +AM L + + +AG  PD +VY T+M G+  L+   EA+ VYK M E+G +
Sbjct: 223 CNS---KDLREAMFLVDQLGNAGFKPDCFVYNTIMKGYCTLSKGSEAVGVYKKMKEEGVE 279

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PD VT NTLI    ++G+ ++A   +K M++ G +PD  TYTSLMNG+CR+G    A+  
Sbjct: 280 PDRVTYNTLIFGLSKSGRVEEARRYLKTMVDAGFEPDAATYTSLMNGMCRKGESLGALSL 339

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L+EM+  G  PN+ TYNTLL GL ++  + + ++ +E M  N +++  +GY
Sbjct: 340 LEEMEAKGCAPNDCTYNTLLHGLCKARLMDKGMELYELMKSNGVKLESNGY 390



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 21/189 (11%)
 Frame = -2

Query: 558 RLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSD--EALEVYKMMSEDGCKP 385
           +L +H+ K+   F        SP R  +  L++   +   S   +   V  +M   GC+P
Sbjct: 105 KLFQHILKSQPKF--------SPGRSTFLILLSHACRATDSSIADVHRVLNLMVNSGCEP 156

Query: 384 DLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCR----------- 238
           D VT + ++   C  G+ D+A + +K + EK   PD +TY  L+  LC+           
Sbjct: 157 DQVTTDVVVRSLCETGRIDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCRSLRVAYDFT 216

Query: 237 --------EGRVDEAVGALDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVEN 82
                      + EA+  +D++   G +P+   YNT++ G       S AV  ++ M E 
Sbjct: 217 IMIDHVCNSKDLREAMFLVDQLGNAGFKPDCFVYNTIMKGYCTLSKGSEAVGVYKKMKEE 276

Query: 81  DIRINRDGY 55
            +  +R  Y
Sbjct: 277 GVEPDRVTY 285



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 37/109 (33%), Positives = 55/109 (50%)
 Frame = -2

Query: 543 MSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNT 364
           + +A    +TM DAG  PD   Y +LMNG  +   S  AL + + M   GC P+  T NT
Sbjct: 298 VEEARRYLKTMVDAGFEPDAATYTSLMNGMCRKGESLGALSLLEEMEAKGCAPNDCTYNT 357

Query: 363 LIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEA 217
           L+   C+    D+ +E  + M   G K +   Y +L+  L + G+V EA
Sbjct: 358 LLHGLCKARLMDKGMELYELMKSNGVKLESNGYGTLVRSLVKTGKVAEA 406


>gb|ESW06544.1| hypothetical protein PHAVU_010G056500g [Phaseolus vulgaris]
          Length = 462

 Score =  137 bits (344), Expect = 2e-30
 Identities = 71/171 (41%), Positives = 106/171 (61%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CN    K++ +AM L   + + G  PD +VY T+M G+  L+   EA+EVY  M E+G +
Sbjct: 240 CNG---KNLREAMRLVSVLHEEGFKPDCFVYNTIMKGYCVLSRGSEAIEVYNKMKEEGVE 296

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PDLVT NTLI    ++G+  +A + ++ M EKG  PD  TYT+LMNG+CR+G V  A+  
Sbjct: 297 PDLVTYNTLIFGLSKSGRVVEAKKLLRVMAEKGYFPDEVTYTTLMNGMCRKGEVLAALAL 356

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L EM+  G  PNE TYNTLL GL ++  + +A++F+  + E  ++ +   Y
Sbjct: 357 LGEMEGKGCSPNECTYNTLLHGLCKARLLEKAIEFYGVIKEGGLKFDTASY 407



 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 51/157 (32%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
 Frame = -2

Query: 552 AKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSED-GCKPDLV 376
           A H+  A++L          PD Y +  L+    K        +    M E  G KPDLV
Sbjct: 171 AGHLDHAIELVNEFASKHCLPDTYTFNFLVKHLCKARALSSVYDFIDEMREKFGVKPDLV 230

Query: 375 TCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEM 196
           T   LI   C      +A+  V  + E+G KPD F Y ++M G C   R  EA+   ++M
Sbjct: 231 TYTILIDNVCNGKNLREAMRLVSVLHEEGFKPDCFVYNTIMKGYCVLSRGSEAIEVYNKM 290

Query: 195 KRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVE 85
           K  G+ P+  TYNTL+ GL++S  +  A      M E
Sbjct: 291 KEEGVEPDLVTYNTLIFGLSKSGRVVEAKKLLRVMAE 327



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
 Frame = -2

Query: 516 TMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNG 337
           +M  AG++PD       +         D A+E+    +   C PD  T N L+   C+  
Sbjct: 148 SMHAAGVTPDAATADVAIRALCSAGHLDHAIELVNEFASKHCLPDTYTFNFLVKHLCKAR 207

Query: 336 QTDQALEQVKNMLEK-GPKPDVFTYTSLMNGLCREGRVDEAVGALDEMKRVGIRPNEKTY 160
                 + +  M EK G KPD+ TYT L++ +C    + EA+  +  +   G +P+   Y
Sbjct: 208 ALSSVYDFIDEMREKFGVKPDLVTYTILIDNVCNGKNLREAMRLVSVLHEEGFKPDCFVY 267

Query: 159 NTLLVGLARSDNISRAVDFFEDMVENDI 76
           NT++ G       S A++ +  M E  +
Sbjct: 268 NTIMKGYCVLSRGSEAIEVYNKMKEEGV 295


>ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutrema salsugineum]
           gi|557110430|gb|ESQ50721.1| hypothetical protein
           EUTSA_v10022683mg [Eutrema salsugineum]
          Length = 462

 Score =  137 bits (344), Expect = 2e-30
 Identities = 68/171 (39%), Positives = 106/171 (61%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CN+   K++ +AM L   + DAG  PD ++Y T+M GF  L+   EA+ VYK M E+G +
Sbjct: 240 CNS---KNLREAMRLVSALGDAGFKPDCFLYNTIMKGFCTLSKGSEAIIVYKKMKEEGVE 296

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PD +T NTLI    ++G+ ++A + ++ M+E G +PD  TYTSLMNG+CR+G    A+  
Sbjct: 297 PDRITYNTLIFGLSKSGRVEEARKYLQTMVEAGYEPDAVTYTSLMNGMCRKGASLGALSL 356

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L+EM+  G  PN  TYNTLL GL ++  + + ++ +  M  N +++    Y
Sbjct: 357 LEEMEARGCAPNACTYNTLLYGLCKARLMDKGIELYGLMKSNGVKLESSAY 407



 Score = 89.0 bits (219), Expect = 8e-16
 Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
 Frame = -2

Query: 543 MSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSED-GCKPDLVTCN 367
           +S+AMDL + +      PD Y Y  L+    K    D   E    M E    KPDLV+  
Sbjct: 174 ISEAMDLIKELSKNHSPPDTYTYNFLLKHLCKCGSLDVVYEFIDEMKETFEVKPDLVSYT 233

Query: 366 TLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMKRV 187
            LI   C +    +A+  V  + + G KPD F Y ++M G C   +  EA+    +MK  
Sbjct: 234 ILIDNVCNSKNLREAMRLVSALGDAGFKPDCFLYNTIMKGFCTLSKGSEAIIVYKKMKEE 293

Query: 186 GIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVE 85
           G+ P+  TYNTL+ GL++S  +  A  + + MVE
Sbjct: 294 GVEPDRITYNTLIFGLSKSGRVEEARKYLQTMVE 327



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 7/162 (4%)
 Frame = -2

Query: 555 LAKHMSKAMDL------FETMRDA-GLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSED 397
           L KH+ K   L       + M++   + PD   Y  L++         EA+ +   + + 
Sbjct: 199 LLKHLCKCGSLDVVYEFIDEMKETFEVKPDLVSYTILIDNVCNSKNLREAMRLVSALGDA 258

Query: 396 GCKPDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEA 217
           G KPD    NT++   C   +  +A+   K M E+G +PD  TY +L+ GL + GRV+EA
Sbjct: 259 GFKPDCFLYNTIMKGFCTLSKGSEAIIVYKKMKEEGVEPDRITYNTLIFGLSKSGRVEEA 318

Query: 216 VGALDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDM 91
              L  M   G  P+  TY +L+ G+ R      A+   E+M
Sbjct: 319 RKYLQTMVEAGYEPDAVTYTSLMNGMCRKGASLGALSLLEEM 360



 Score = 68.9 bits (167), Expect = 8e-10
 Identities = 39/114 (34%), Positives = 56/114 (49%)
 Frame = -2

Query: 543 MSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNT 364
           + +A    +TM +AG  PD   Y +LMNG  +   S  AL + + M   GC P+  T NT
Sbjct: 315 VEEARKYLQTMVEAGYEPDAVTYTSLMNGMCRKGASLGALSLLEEMEARGCAPNACTYNT 374

Query: 363 LIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALD 202
           L+   C+    D+ +E    M   G K +   Y +L+ GL R G+V EA    D
Sbjct: 375 LLYGLCKARLMDKGIELYGLMKSNGVKLESSAYATLVRGLVRSGKVAEAYEVFD 428



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 1/172 (0%)
 Frame = -2

Query: 513 MRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQ 334
           M + G++P++      +    +     EA+++ K +S++   PD  T N L+   C+ G 
Sbjct: 149 MVNNGVAPNQVTTDIAVRSLCESGRISEAMDLIKELSKNHSPPDTYTYNFLLKHLCKCGS 208

Query: 333 TDQALEQVKNMLEKGP-KPDVFTYTSLMNGLCREGRVDEAVGALDEMKRVGIRPNEKTYN 157
            D   E +  M E    KPD+ +YT L++ +C    + EA+  +  +   G +P+   YN
Sbjct: 209 LDVVYEFIDEMKETFEVKPDLVSYTILIDNVCNSKNLREAMRLVSALGDAGFKPDCFLYN 268

Query: 156 TLLVGLARSDNISRAVDFFEDMVENDIRINRDGYIXXXXXXXXXXXLEEASK 1
           T++ G       S A+  ++ M E  +  +R  Y            +EEA K
Sbjct: 269 TIMKGFCTLSKGSEAIIVYKKMKEEGVEPDRITYNTLIFGLSKSGRVEEARK 320



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
 Frame = -2

Query: 501 GLSPDRYVYATLMNGFAKL---NLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQT 331
           G SP+   +  L++   +    +LS+  L V  +M  +G  P+ VT +  +   C +G+ 
Sbjct: 116 GFSPEHSTFHILLSHACRAPDSSLSNVHL-VLNLMVNNGVAPNQVTTDIAVRSLCESGRI 174

Query: 330 DQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMKRV-GIRPNEKTYNT 154
            +A++ +K + +    PD +TY  L+  LC+ G +D     +DEMK    ++P+  +Y  
Sbjct: 175 SEAMDLIKELSKNHSPPDTYTYNFLLKHLCKCGSLDVVYEFIDEMKETFEVKPDLVSYTI 234

Query: 153 LLVGLARSDNISRAV 109
           L+  +  S N+  A+
Sbjct: 235 LIDNVCNSKNLREAM 249


>gb|EXC35267.1| hypothetical protein L484_026589 [Morus notabilis]
          Length = 444

 Score =  136 bits (343), Expect = 3e-30
 Identities = 71/171 (41%), Positives = 102/171 (59%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CN++  + +++   L   + + G  PD ++Y T+M G+  L+   EA+EVY  M E+G +
Sbjct: 222 CNSKNLREITR---LVAVLGEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNKMKENGVE 278

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PD VT NTLI    ++G+  +A + +K M EKG  PDV TYTSLMNGLCRE  V  A   
Sbjct: 279 PDTVTYNTLIFGLAKSGRAKEARKYLKIMAEKGHSPDVVTYTSLMNGLCRERDVLGAYAL 338

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L+EMK  G  PNE TYNTLL G  ++  + R V+ +  M E  + ++   Y
Sbjct: 339 LEEMKERGCEPNECTYNTLLHGFCKAKMVERGVELYRVMKERGMELDTAAY 389



 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 40/129 (31%), Positives = 60/129 (46%)
 Frame = -2

Query: 537 KAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLI 358
           +A    + M + G SPD   Y +LMNG  +      A  + + M E GC+P+  T NTL+
Sbjct: 299 EARKYLKIMAEKGHSPDVVTYTSLMNGLCRERDVLGAYALLEEMKERGCEPNECTYNTLL 358

Query: 357 MIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMKRVGIR 178
              C+    ++ +E  + M E+G + D   Y +L+   CR G V EA    D        
Sbjct: 359 HGFCKAKMVERGVELYRVMKERGMELDTAAYATLVRVFCRRGEVAEAYEVFDYAVESKSL 418

Query: 177 PNEKTYNTL 151
            N   Y+TL
Sbjct: 419 TNVAAYSTL 427



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 30/97 (30%), Positives = 51/97 (52%)
 Frame = -2

Query: 534 AMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIM 355
           A  L E M++ G  P+   Y TL++GF K  + +  +E+Y++M E G + D     TL+ 
Sbjct: 335 AYALLEEMKERGCEPNECTYNTLLHGFCKAKMVERGVELYRVMKERGMELDTAAYATLVR 394

Query: 354 IHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGL 244
           + CR G+  +A E     +E     +V  Y++L + L
Sbjct: 395 VFCRRGEVAEAYEVFDYAVESKSLTNVAAYSTLESAL 431


>ref|XP_002884075.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329915|gb|EFH60334.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 462

 Score =  136 bits (343), Expect = 3e-30
 Identities = 68/171 (39%), Positives = 109/171 (63%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CN+   K++ +AM L   + +AG  PD ++Y T+M GF  L+   EA+ VYK M E+G +
Sbjct: 240 CNS---KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAIGVYKKMKEEGVE 296

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PD +T NTLI    ++G+ ++A   +K M++ G +PD  TYTSLMNG+CR+G    A+  
Sbjct: 297 PDQITYNTLIYGLSKSGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSL 356

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L+EM+  G  PN+ TYNTLL GL ++  + + ++ +E M  + +++  +GY
Sbjct: 357 LEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYELMKSSGVKLETNGY 407



 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
 Frame = -2

Query: 543 MSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSED-GCKPDLVTCN 367
           + +A DL + + +    PD Y Y  L+    K        E    M +D   KPDLV+  
Sbjct: 174 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 233

Query: 366 TLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMKRV 187
            LI   C +    +A+  V  +   G KPD F Y ++M G C   +  EA+G   +MK  
Sbjct: 234 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAIGVYKKMKEE 293

Query: 186 GIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVE 85
           G+ P++ TYNTL+ GL++S  +  A  + + MV+
Sbjct: 294 GVEPDQITYNTLIYGLSKSGRVEEARMYLKTMVD 327



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 41/131 (31%), Positives = 61/131 (46%)
 Frame = -2

Query: 543 MSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNT 364
           + +A    +TM DAG  PD   Y +LMNG  +   S  AL + + M   GC P+  T NT
Sbjct: 315 VEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNT 374

Query: 363 LIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMKRVG 184
           L+   C+    D+ +E  + M   G K +   Y +L+  L + G+V EA    D      
Sbjct: 375 LLHGLCKARLMDKGMELYELMKSSGVKLETNGYATLVRSLVKSGKVAEAYEVFDYAVDSK 434

Query: 183 IRPNEKTYNTL 151
              +   Y+TL
Sbjct: 435 SLTDASAYSTL 445



 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
 Frame = -2

Query: 420 VYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLC 241
           V  +M  +G +PD VT +  +   C  G+ D+A + +K + EK   PD +TY  L+  LC
Sbjct: 145 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 204

Query: 240 REGRVDEAVGALDEMK-RVGIRPNEKTYNTLLVGLARSDNISRAV 109
           +   +      +DEM+    ++P+  ++  L+  +  S N+  A+
Sbjct: 205 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM 249


>ref|NP_565422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75146596|sp|Q84J71.1|PP161_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g17670 gi|28393395|gb|AAO42121.1| unknown protein
           [Arabidopsis thaliana] gi|28973597|gb|AAO64123.1|
           unknown protein [Arabidopsis thaliana]
           gi|330251570|gb|AEC06664.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 463

 Score =  135 bits (341), Expect = 6e-30
 Identities = 68/171 (39%), Positives = 108/171 (63%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CN+   K++ +AM L   + +AG  PD ++Y T+M GF  L+   EA+ VYK M E+G +
Sbjct: 241 CNS---KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PD +T NTLI    + G+ ++A   +K M++ G +PD  TYTSLMNG+CR+G    A+  
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSL 357

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L+EM+  G  PN+ TYNTLL GL ++  + + ++ +E M  + +++  +GY
Sbjct: 358 LEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGY 408



 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
 Frame = -2

Query: 543 MSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSED-GCKPDLVTCN 367
           + +A DL + + +    PD Y Y  L+    K        E    M +D   KPDLV+  
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234

Query: 366 TLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMKRV 187
            LI   C +    +A+  V  +   G KPD F Y ++M G C   +  EAVG   +MK  
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294

Query: 186 GIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVE 85
           G+ P++ TYNTL+ GL+++  +  A  + + MV+
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 42/134 (31%), Positives = 62/134 (46%)
 Frame = -2

Query: 552 AKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVT 373
           A  + +A    +TM DAG  PD   Y +LMNG  +   S  AL + + M   GC P+  T
Sbjct: 313 AGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCT 372

Query: 372 CNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMK 193
            NTL+   C+    D+ +E  + M   G K +   Y +L+  L + G+V EA    D   
Sbjct: 373 YNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAV 432

Query: 192 RVGIRPNEKTYNTL 151
                 +   Y+TL
Sbjct: 433 DSKSLSDASAYSTL 446



 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
 Frame = -2

Query: 420 VYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLC 241
           V  +M  +G +PD VT +  +   C  G+ D+A + +K + EK   PD +TY  L+  LC
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205

Query: 240 REGRVDEAVGALDEMK-RVGIRPNEKTYNTLLVGLARSDNISRAV 109
           +   +      +DEM+    ++P+  ++  L+  +  S N+  A+
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM 250


>gb|AAM62704.1| unknown [Arabidopsis thaliana]
          Length = 463

 Score =  135 bits (341), Expect = 6e-30
 Identities = 68/171 (39%), Positives = 108/171 (63%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CN+   K++ +AM L   + +AG  PD ++Y T+M GF  L+   EA+ VYK M E+G +
Sbjct: 241 CNS---KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PD +T NTLI    + G+ ++A   +K M++ G +PD  TYTSLMNG+CR+G    A+  
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSL 357

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L+EM+  G  PN+ TYNTLL GL ++  + + ++ +E M  + +++  +GY
Sbjct: 358 LEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGY 408



 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
 Frame = -2

Query: 543 MSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSED-GCKPDLVTCN 367
           + +A DL + + +    PD Y Y  L+    K        E    M +D   KPDLV+  
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234

Query: 366 TLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMKRV 187
            LI   C +    +A+  V  +   G KPD F Y ++M G C   +  EAVG   +MK  
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294

Query: 186 GIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVE 85
           G+ P++ TYNTL+ GL+++  +  A  + + MV+
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 42/134 (31%), Positives = 62/134 (46%)
 Frame = -2

Query: 552 AKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVT 373
           A  + +A    +TM DAG  PD   Y +LMNG  +   S  AL + + M   GC P+  T
Sbjct: 313 AGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCT 372

Query: 372 CNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMK 193
            NTL+   C+    D+ +E  + M   G K +   Y +L+  L + G+V EA    D   
Sbjct: 373 YNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAV 432

Query: 192 RVGIRPNEKTYNTL 151
                 +   Y+TL
Sbjct: 433 DSKSLSDASAYSTL 446



 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
 Frame = -2

Query: 420 VYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLC 241
           V  +M  +G +PD VT +  +   C  G+ D+A + +K + EK   PD +TY  L+  LC
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205

Query: 240 REGRVDEAVGALDEMK-RVGIRPNEKTYNTLLVGLARSDNISRAV 109
           +   +      +DEM+    ++P+  ++  L+  +  S N+  A+
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM 250


>ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like isoform X1 [Cicer arietinum]
           gi|502155526|ref|XP_004510106.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g17670-like isoform X2 [Cicer arietinum]
          Length = 468

 Score =  135 bits (339), Expect = 9e-30
 Identities = 68/171 (39%), Positives = 103/171 (60%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CNA   K++ + + L   + + G   D Y Y T+M G+ K+   +EA+EVY  M E G +
Sbjct: 242 CNA---KNLRETLSLMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNEAIEVYNKMKEAGVE 298

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PDL+T NTLI    ++G+  +A + ++ M EKG  PD  TYTSLMNGLCR+G +  A+  
Sbjct: 299 PDLITYNTLIYGLSKSGRVMEAKKLLRVMAEKGHFPDEVTYTSLMNGLCRKGEILSAIAL 358

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L+EM+ +G  PN  TYNTLL GL +S    +A++ + +M    +++    Y
Sbjct: 359 LEEMEAIGCSPNSCTYNTLLHGLCKSRLFDKAMELYGEMKSGCLKLEMASY 409



 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 53/157 (33%), Positives = 81/157 (51%), Gaps = 1/157 (0%)
 Frame = -2

Query: 552 AKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAK-LNLSDEALEVYKMMSEDGCKPDLV 376
           A  M +A++L + +     SPD Y +  L+    K L LS     + +M S+ G KPDLV
Sbjct: 173 AGRMDEAVELIKELSSKHCSPDIYTFNFLVKHLCKCLTLSTLYSFIIEMRSKFGVKPDLV 232

Query: 375 TCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEM 196
           T   LI   C      + L  +  + E+G K D + Y ++M G C+ GR +EA+   ++M
Sbjct: 233 TFTILIDNVCNAKNLRETLSLMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNEAIEVYNKM 292

Query: 195 KRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVE 85
           K  G+ P+  TYNTL+ GL++S  +  A      M E
Sbjct: 293 KEAGVEPDLITYNTLIYGLSKSGRVMEAKKLLRVMAE 329



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 3/168 (1%)
 Frame = -2

Query: 549 KHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLS--DEALEVYKMMSEDGCKPDLV 376
           +HM+K    F        +PD+  Y  L+    K   +   +  +   +M  DG  PD V
Sbjct: 110 RHMTKTHPSF--------TPDKSTYHILLTQSCKSTDTTLSQIHQTLNLMVSDGVSPDKV 161

Query: 375 TCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEM 196
           T +  +   C  G+ D+A+E +K +  K   PD++T+  L+  LC+   +      + EM
Sbjct: 162 TVDLAVRSLCSAGRMDEAVELIKELSSKHCSPDIYTFNFLVKHLCKCLTLSTLYSFIIEM 221

Query: 195 K-RVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           + + G++P+  T+  L+  +  + N+   +     + E   +++   Y
Sbjct: 222 RSKFGVKPDLVTFTILIDNVCNAKNLRETLSLMSVLDEEGFKLDCYAY 269


>ref|XP_003635566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like, partial [Vitis vinifera]
          Length = 253

 Score =  135 bits (339), Expect = 9e-30
 Identities = 72/171 (42%), Positives = 101/171 (59%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CN    K++ +A  L E + +AG  PD YVY T+M G+  L+   EA+ VYK M E+G +
Sbjct: 31  CNG---KNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKMKEEGVE 87

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PDLVT NTLI    ++G+  +A + +  M E G  PD  TYTSLMNGLCREG    A+  
Sbjct: 88  PDLVTYNTLIFGLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGLCREGNALGALAL 147

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L+EM+  G  PN  TYNTLL GL +   + R ++ +  M    +++ +  Y
Sbjct: 148 LEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASY 198



 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 38/102 (37%), Positives = 55/102 (53%)
 Frame = -2

Query: 390 KPDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVG 211
           KPDLVT   LI   C      +A   ++ + E G KPD + Y ++M G C   +  EA+G
Sbjct: 17  KPDLVTYTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIG 76

Query: 210 ALDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVE 85
              +MK  G+ P+  TYNTL+ GL++S  +  A  F + M E
Sbjct: 77  VYKKMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMAE 118



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/97 (30%), Positives = 49/97 (50%)
 Frame = -2

Query: 534 AMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIM 355
           A+ L E M   G SP+   Y TL++G  KL + +  +E+Y +M   G K +  +  T + 
Sbjct: 144 ALALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYATFVR 203

Query: 354 IHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGL 244
             C+ G+  +A E    ++E     DV  Y++L N L
Sbjct: 204 ALCKEGRVAEAYEAFDYVVESKSFDDVTAYSTLENSL 240


>gb|ADE76512.1| unknown [Picea sitchensis]
          Length = 224

 Score =  135 bits (339), Expect = 9e-30
 Identities = 68/171 (39%), Positives = 107/171 (62%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CN    K+M +A +L + M ++G  PD ++Y TLM G+ K+N ++EALE+YK M  +GC 
Sbjct: 5   CNG---KNMREARNLLDGMLESGCKPDGFLYNTLMKGYCKINKANEALEIYKKMDAEGCA 61

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PD+VT NTLI    +  + D+A + +K M+  G  PDV TYTSLMNG+CR+G    A+  
Sbjct: 62  PDVVTFNTLIFGLSKVAKVDEAKKFLKLMVRAGHPPDVITYTSLMNGMCRKGDAMGALAL 121

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L+EM++   +P+  TYNTL+ GL    ++ +A+  +E +   ++ +    Y
Sbjct: 122 LEEMQQSVCQPDGCTYNTLMHGLCMCQHLHQALKLYEVLKSKEVDLESGTY 172



 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 41/137 (29%), Positives = 65/137 (47%)
 Frame = -2

Query: 561 ARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPD 382
           +++AK + +A    + M  AG  PD   Y +LMNG  +   +  AL + + M +  C+PD
Sbjct: 75  SKVAK-VDEAKKFLKLMVRAGHPPDVITYTSLMNGMCRKGDAMGALALLEEMQQSVCQPD 133

Query: 381 LVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALD 202
             T NTL+   C      QAL+  + +  K    +  TY + +  LCR G+V EA    D
Sbjct: 134 GCTYNTLMHGLCMCQHLHQALKLYEVLKSKEVDLESGTYAAFLKALCRAGKVAEAYEVFD 193

Query: 201 EMKRVGIRPNEKTYNTL 151
            +      P+   Y+ L
Sbjct: 194 YVLNRKSLPDVVAYSVL 210


>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
          Length = 472

 Score =  135 bits (339), Expect = 9e-30
 Identities = 72/171 (42%), Positives = 101/171 (59%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CN    K++ +A  L E + +AG  PD YVY T+M G+  L+   EA+ VYK M E+G +
Sbjct: 250 CNG---KNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKMKEEGVE 306

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PDLVT NTLI    ++G+  +A + +  M E G  PD  TYTSLMNGLCREG    A+  
Sbjct: 307 PDLVTYNTLIFGLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGLCREGNALGALAL 366

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L+EM+  G  PN  TYNTLL GL +   + R ++ +  M    +++ +  Y
Sbjct: 367 LEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASY 417



 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 1/162 (0%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLN-LSDEALEVYKMMSEDGC 391
           C+A   +H   A++L + +      PD + Y  ++    K   LS     + ++ +    
Sbjct: 179 CSAGREEH---AIELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSFQL 235

Query: 390 KPDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVG 211
           KPDLVT   LI   C      +A   ++ + E G KPD + Y ++M G C   +  EA+G
Sbjct: 236 KPDLVTYTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIG 295

Query: 210 ALDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVE 85
              +MK  G+ P+  TYNTL+ GL++S  +  A  F + M E
Sbjct: 296 VYKKMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMAE 337



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
 Frame = -2

Query: 501 GLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQA 322
           G  PDR      +         + A+E+ K +S     PD  T N +I   C+     +A
Sbjct: 163 GFPPDRVTTDIAVRSLCSAGREEHAIELVKELSLKHSPPDSFTYNFIIRHLCKT----RA 218

Query: 321 LEQVKNMLEKGP-----KPDVFTYTSLMNGLCREGRVDEAVGALDEMKRVGIRPNEKTYN 157
           L  V N +++       KPD+ TYT L++ +C    + EA   L+ +   G +P+   YN
Sbjct: 219 LSTVYNFIDELQNSFQLKPDLVTYTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYVYN 278

Query: 156 TLLVGLARSDNISRAVDFFEDMVENDI 76
           T++ G    D  S A+  ++ M E  +
Sbjct: 279 TIMKGYCILDKGSEAIGVYKKMKEEGV 305



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 3/158 (1%)
 Frame = -2

Query: 549 KHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEAL--EVYKMMSEDGCKPDLV 376
           +HM K+   F        SP+R  Y  L++   K   SD +   +   +M   G  PD V
Sbjct: 118 RHMIKSQPSF--------SPERSTYHILLSQSCKSPNSDLSAVHQTLNLMVTHGFPPDRV 169

Query: 375 TCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEM 196
           T +  +   C  G+ + A+E VK +  K   PD FTY  ++  LC+   +      +DE+
Sbjct: 170 TTDIAVRSLCSAGREEHAIELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDEL 229

Query: 195 KR-VGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVE 85
           +    ++P+  TY  L+  +    N+  A    E + E
Sbjct: 230 QNSFQLKPDLVTYTILIDNVCNGKNLREATRLLEVLGE 267



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/97 (30%), Positives = 49/97 (50%)
 Frame = -2

Query: 534 AMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIM 355
           A+ L E M   G SP+   Y TL++G  KL + +  +E+Y +M   G K +  +  T + 
Sbjct: 363 ALALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYATFVR 422

Query: 354 IHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGL 244
             C+ G+  +A E    ++E     DV  Y++L N L
Sbjct: 423 ALCKEGRVAEAYEAFDYVVESKSFDDVTAYSTLENSL 459


>ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like isoform X1 [Citrus sinensis]
           gi|568825365|ref|XP_006467050.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g17670-like isoform X2 [Citrus sinensis]
           gi|568825367|ref|XP_006467051.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g17670-like isoform X3 [Citrus sinensis]
          Length = 465

 Score =  134 bits (338), Expect = 1e-29
 Identities = 70/171 (40%), Positives = 101/171 (59%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CN    K++ +AM L   + D+G  PD +VY T+M G+  L+   E + VY  M E+G +
Sbjct: 243 CNT---KNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKMKEEGVE 299

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PDLVT NTLI    + G+  +A + +K M+E G  PD  TYTSLMNG+CREG    A+  
Sbjct: 300 PDLVTYNTLIFGLSKCGRVGEAKKFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGALAL 359

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L+EM+  G  PN  TYNTLL GL +S  + + ++ +  M E  +++    Y
Sbjct: 360 LEEMEGKGCSPNSCTYNTLLYGLCKSRLMEKGIELYRAMKEGGVKLETAAY 410



 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
 Frame = -2

Query: 543 MSKAMDLFETMRDAGLSPDRYVYATLMNGFAKL-NLSDEALEVYKMMSEDGCKPDLVTCN 367
           +  A++L + +      PD + Y  L+    K  +L+     V +M +  G KP+LVT  
Sbjct: 177 LDDAIELVKGLSLNSFPPDIFTYNFLVKCLCKCRSLTTVYNFVDQMRASLGIKPNLVTYT 236

Query: 366 TLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMKRV 187
            LI   C      +A+  V  + + G KPD F Y ++M G C   R  E +G  ++MK  
Sbjct: 237 ILIDNVCNTKNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKMKEE 296

Query: 186 GIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVE 85
           G+ P+  TYNTL+ GL++   +  A  F + MVE
Sbjct: 297 GVEPDLVTYNTLIFGLSKCGRVGEAKKFLKIMVE 330



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 37/114 (32%), Positives = 58/114 (50%)
 Frame = -2

Query: 543 MSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNT 364
           + +A    + M +AG  PD   Y +LMNG  +   +  AL + + M   GC P+  T NT
Sbjct: 318 VGEAKKFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGALALLEEMEGKGCSPNSCTYNT 377

Query: 363 LIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALD 202
           L+   C++   ++ +E  + M E G K +   Y +L+  LCR G+V EA    D
Sbjct: 378 LLYGLCKSRLMEKGIELYRAMKEGGVKLETAAYATLVRALCRHGKVAEAYEVFD 431



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 33/97 (34%), Positives = 49/97 (50%)
 Frame = -2

Query: 534 AMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIM 355
           A+ L E M   G SP+   Y TL+ G  K  L ++ +E+Y+ M E G K +     TL+ 
Sbjct: 356 ALALLEEMEGKGCSPNSCTYNTLLYGLCKSRLMEKGIELYRAMKEGGVKLETAAYATLVR 415

Query: 354 IHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGL 244
             CR+G+  +A E     +E     DV  YT+L + L
Sbjct: 416 ALCRHGKVAEAYEVFDYAVESKSLTDVAAYTTLESTL 452



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 3/152 (1%)
 Frame = -2

Query: 555 LAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKL--NLSDEALEVYKMMSEDGCKPD 382
           L  HM KA   F        +PDR  Y  L+    +   N      +   +M+ +G  P+
Sbjct: 109 LLNHMIKANPSF--------NPDRSTYHILLAQSCQAPDNSFSSIRKTLSLMTTNGYPPN 160

Query: 381 LVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALD 202
             T +  +   C   + D A+E VK +      PD+FTY  L+  LC+   +      +D
Sbjct: 161 QGTTDIAVRSLCSVNRLDDAIELVKGLSLNSFPPDIFTYNFLVKCLCKCRSLTTVYNFVD 220

Query: 201 EMK-RVGIRPNEKTYNTLLVGLARSDNISRAV 109
           +M+  +GI+PN  TY  L+  +  + N+  A+
Sbjct: 221 QMRASLGIKPNLVTYTILIDNVCNTKNLREAM 252


>gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 464

 Score =  134 bits (338), Expect = 1e-29
 Identities = 70/171 (40%), Positives = 103/171 (60%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CN+   K++ +AM L   + ++G  PD +VY T+M G+  L+   E +EVYK M E+G +
Sbjct: 242 CNS---KNLREAMRLVGVLNESGFKPDCFVYNTIMKGYCMLSKGSEIIEVYKKMKEEGVE 298

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PDLVT NTLI    ++G+  +A + +  M+E G  PD  TYTSLMNG+CREG    AV  
Sbjct: 299 PDLVTYNTLIFGLSKSGRVKEARKYLDIMVESGHFPDAVTYTSLMNGMCREGNALGAVLL 358

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L+EM+R G  PN  TYNTLL GL +   + + ++ +  M    + + +  Y
Sbjct: 359 LEEMERKGCSPNSCTYNTLLHGLCKGRLMEKGMELYRAMKSAGMMLEKASY 409



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 1/158 (0%)
 Frame = -2

Query: 552 AKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLN-LSDEALEVYKMMSEDGCKPDLV 376
           A  +  A++L + +      PD + +  L+    K   LS     +  M S  G KPDLV
Sbjct: 173 AGRIDHAVELVKELSLKHSPPDNFTFNFLVKNLCKCRTLSTVYGFIDDMKSSFGIKPDLV 232

Query: 375 TCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEM 196
           T   LI   C +    +A+  V  + E G KPD F Y ++M G C   +  E +    +M
Sbjct: 233 TYTILIDNVCNSKNLREAMRLVGVLNESGFKPDCFVYNTIMKGYCMLSKGSEIIEVYKKM 292

Query: 195 KRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVEN 82
           K  G+ P+  TYNTL+ GL++S  +  A  + + MVE+
Sbjct: 293 KEEGVEPDLVTYNTLIFGLSKSGRVKEARKYLDIMVES 330



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
 Frame = -2

Query: 546 HMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSD--EALEVYKMMSEDGCKPDLVT 373
           HM KA   F        SPDR  Y  L++   K   S      +   +M  +G KP+ VT
Sbjct: 111 HMVKAHPSF--------SPDRSTYHILLSQSCKAPDSSLSPVRQTLNLMVTNGLKPNQVT 162

Query: 372 CNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMK 193
            +  I   C  G+ D A+E VK +  K   PD FT+  L+  LC+   +    G +D+MK
Sbjct: 163 TDVAIRSLCEAGRIDHAVELVKELSLKHSPPDNFTFNFLVKNLCKCRTLSTVYGFIDDMK 222

Query: 192 -RVGIRPNEKTYNTLLVGLARSDNISRAV 109
              GI+P+  TY  L+  +  S N+  A+
Sbjct: 223 SSFGIKPDLVTYTILIDNVCNSKNLREAM 251


>ref|XP_006425315.1| hypothetical protein CICLE_v10025555mg [Citrus clementina]
           gi|557527305|gb|ESR38555.1| hypothetical protein
           CICLE_v10025555mg [Citrus clementina]
          Length = 465

 Score =  134 bits (336), Expect = 2e-29
 Identities = 69/171 (40%), Positives = 101/171 (59%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CN    K++ +AM L   + D+G  PD +VY T+M G+  L+   E + VY  M E+G +
Sbjct: 243 CNT---KNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKMKEEGVE 299

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PDLVT NT+I    + G+  +A + +K M+E G  PD  TYTSLMNG+CREG    A+  
Sbjct: 300 PDLVTYNTMIFGLSKCGRVGEAKKFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGALAL 359

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L+EM+  G  PN  TYNTLL GL +S  + + ++ +  M E  +++    Y
Sbjct: 360 LEEMEGKGCSPNSCTYNTLLYGLCKSRLMEKGIELYRAMKEGGVKLETAAY 410



 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
 Frame = -2

Query: 543 MSKAMDLFETMRDAGLSPDRYVYATLMNGFAKL-NLSDEALEVYKMMSEDGCKPDLVTCN 367
           +  A++L + +      PD + Y  L+    K  +L+     V ++ +  G KP+LVT  
Sbjct: 177 LDDAIELVKGLSLNSFPPDIFTYNFLVKCLCKCRSLTTVYNFVDQVRASFGIKPNLVTYT 236

Query: 366 TLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMKRV 187
            LI   C      +A+  V  + + G KPD F Y ++M G C   R  E +G  ++MK  
Sbjct: 237 ILIDNVCNTKNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKMKEE 296

Query: 186 GIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVE 85
           G+ P+  TYNT++ GL++   +  A  F + MVE
Sbjct: 297 GVEPDLVTYNTMIFGLSKCGRVGEAKKFLKIMVE 330



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 37/114 (32%), Positives = 58/114 (50%)
 Frame = -2

Query: 543 MSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNT 364
           + +A    + M +AG  PD   Y +LMNG  +   +  AL + + M   GC P+  T NT
Sbjct: 318 VGEAKKFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGALALLEEMEGKGCSPNSCTYNT 377

Query: 363 LIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALD 202
           L+   C++   ++ +E  + M E G K +   Y +L+  LCR G+V EA    D
Sbjct: 378 LLYGLCKSRLMEKGIELYRAMKEGGVKLETAAYATLVRALCRHGKVAEAYEVFD 431



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 33/97 (34%), Positives = 49/97 (50%)
 Frame = -2

Query: 534 AMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIM 355
           A+ L E M   G SP+   Y TL+ G  K  L ++ +E+Y+ M E G K +     TL+ 
Sbjct: 356 ALALLEEMEGKGCSPNSCTYNTLLYGLCKSRLMEKGIELYRAMKEGGVKLETAAYATLVR 415

Query: 354 IHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGL 244
             CR+G+  +A E     +E     DV  YT+L + L
Sbjct: 416 ALCRHGKVAEAYEVFDYAVESKSLTDVAAYTTLESTL 452


>gb|EMJ05384.1| hypothetical protein PRUPE_ppa015299mg [Prunus persica]
          Length = 464

 Score =  134 bits (336), Expect = 2e-29
 Identities = 72/170 (42%), Positives = 104/170 (61%)
 Frame = -2

Query: 564 NARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKP 385
           N    +++ +A  L + +   G+ PD Y+Y T+M G   LNL +EALEV K M E+G +P
Sbjct: 240 NVTNRENLREATRLVDVLAKEGIRPDCYIYNTIMKGCCTLNLGNEALEVLKKMKENGVEP 299

Query: 384 DLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGAL 205
           DLVT NTLI    + G+  +A + +  M+E G  PD  TYTSLMNGLCR+G V  A+G L
Sbjct: 300 DLVTYNTLIFGLSKCGRVVEAKKYLGVMVEMGHFPDAVTYTSLMNGLCRKGDVLGALGLL 359

Query: 204 DEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           +EM+  G  PN  TYNTLL GL ++  + + +D +  M E  ++++   Y
Sbjct: 360 EEMQEKGCEPNVCTYNTLLHGLCKAKLLEKGLDLYGVMKECGMKLDTASY 409



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 5/166 (3%)
 Frame = -2

Query: 555 LAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEAL----EVYKMMSEDGCK 388
           L  HM K    F        SPDR  Y  L++   K    D+ L    +V   M  +G  
Sbjct: 108 LFNHMIKTHPTF--------SPDRSTYHVLLSQSCKA--PDQTLKPVHQVLNFMLTNGFS 157

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           P+ VT +  +   C +     A+E +K M  K   PD +TY  L+  LC+   V      
Sbjct: 158 PNKVTTDIAVRSLCSSNNVGLAVELIKEMSLKNAAPDSYTYNFLVKCLCKSSAVSTVYDF 217

Query: 207 LDEMK-RVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIR 73
           ++E K   G++P+  TY  L+  +   +N+  A    + + +  IR
Sbjct: 218 IEEFKTSFGLKPDIITYTILIDNVTNRENLREATRLVDVLAKEGIR 263



 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 32/93 (34%), Positives = 48/93 (51%)
 Frame = -2

Query: 534 AMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIM 355
           A+ L E M++ G  P+   Y TL++G  K  L ++ L++Y +M E G K D  +  TL+ 
Sbjct: 355 ALGLLEEMQEKGCEPNVCTYNTLLHGLCKAKLLEKGLDLYGVMKECGMKLDTASYATLVR 414

Query: 354 IHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSL 256
             CR G+   A E     +E     DV  YT+L
Sbjct: 415 ALCREGRVADAYEVFDYAVESKSVTDVAAYTTL 447


>ref|XP_002306437.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222855886|gb|EEE93433.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 462

 Score =  133 bits (334), Expect = 4e-29
 Identities = 69/171 (40%), Positives = 103/171 (60%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CNA   K++ +A  L   +++ GL PD ++Y T+M G+  LN   EA+ +YK M E+G +
Sbjct: 240 CNA---KNIREADRLVAVLKECGLKPDAFLYNTIMKGYCLLNKGIEAVRIYKQMKEEGVE 296

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PDLVT NTLI    + G+  +A + +K M+E G  PD  TYTSLMNG+CREG V  A   
Sbjct: 297 PDLVTYNTLIFGLSKCGRVSEAKKLLKIMVESGHFPDAVTYTSLMNGMCREGDVLGAAAL 356

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L+EM+  G  PN  TYNTLL G  +   +++ V+ +  + +  +++    Y
Sbjct: 357 LEEMELKGCSPNSCTYNTLLHGFCKGRRLNKGVELYGVIKKGGMKLETASY 407



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 47/138 (34%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
 Frame = -2

Query: 492 PDRYVYATLMNGFAKLNLSDEALE-VYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQALE 316
           PD + Y  L+    K  + +     + +M S    KPDLVT   LI   C      +A  
Sbjct: 191 PDTFTYNFLVKCLCKSRIFNSVYSFIDEMKSSFDIKPDLVTYTILIDNVCNAKNIREADR 250

Query: 315 QVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMKRVGIRPNEKTYNTLLVGLA 136
            V  + E G KPD F Y ++M G C   +  EAV    +MK  G+ P+  TYNTL+ GL+
Sbjct: 251 LVAVLKECGLKPDAFLYNTIMKGYCLLNKGIEAVRIYKQMKEEGVEPDLVTYNTLIFGLS 310

Query: 135 RSDNISRAVDFFEDMVEN 82
           +   +S A    + MVE+
Sbjct: 311 KCGRVSEAKKLLKIMVES 328



 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
 Frame = -2

Query: 498 LSPDRYVYATLMNGFAKLNLSD--EALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQ 325
           LSPDR  Y  L++   +   S    A +V  +M   G KP+  T +  I   C  G+ D 
Sbjct: 117 LSPDRSTYHVLLSQSCREPDSSLSSAQKVLNLMINKGFKPNQFTVDVAIRSLCSAGRVDD 176

Query: 324 ALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMK-RVGIRPNEKTYNTLL 148
           A+  VK    K  KPD FTY  L+  LC+    +     +DEMK    I+P+  TY  L+
Sbjct: 177 AILLVKEFSSKHSKPDTFTYNFLVKCLCKSRIFNSVYSFIDEMKSSFDIKPDLVTYTILI 236

Query: 147 VGLARSDNISRA 112
             +  + NI  A
Sbjct: 237 DNVCNAKNIREA 248



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 1/157 (0%)
 Frame = -2

Query: 543 MSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNT 364
           +S A  +   M + G  P+++     +         D+A+ + K  S    KPD  T N 
Sbjct: 139 LSSAQKVLNLMINKGFKPNQFTVDVAIRSLCSAGRVDDAILLVKEFSSKHSKPDTFTYNF 198

Query: 363 LIMIHCRNGQTDQALEQVKNMLEKGP-KPDVFTYTSLMNGLCREGRVDEAVGALDEMKRV 187
           L+   C++   +     +  M      KPD+ TYT L++ +C    + EA   +  +K  
Sbjct: 199 LVKCLCKSRIFNSVYSFIDEMKSSFDIKPDLVTYTILIDNVCNAKNIREADRLVAVLKEC 258

Query: 186 GIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDI 76
           G++P+   YNT++ G    +    AV  ++ M E  +
Sbjct: 259 GLKPDAFLYNTIMKGYCLLNKGIEAVRIYKQMKEEGV 295


>ref|XP_002521681.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539072|gb|EEF40668.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 458

 Score =  132 bits (333), Expect = 5e-29
 Identities = 66/171 (38%), Positives = 103/171 (60%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CN+   K++ +AM L   +R+ G  PD +VY T+M G+  L+   +A++V+K M E+G +
Sbjct: 236 CNS---KNLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDAIQVFKKMKEEGIE 292

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PDL+T NTLI    + G+  +A   +K M+E G  PD  TYTSLMNGLCR+G    A+  
Sbjct: 293 PDLITYNTLIFGLSKGGRVSEAKRYLKIMVESGHFPDAVTYTSLMNGLCRKGDALGALAL 352

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L++M+  G  PN  TYNTLL GL +   + + ++ +  + E  + ++   Y
Sbjct: 353 LEDMEMKGCSPNSCTYNTLLYGLCKERLLEKGIELYNVIKEGGMLLDTASY 403



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
 Frame = -2

Query: 492 PDRYVYATLMNGFAKLN-LSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQALE 316
           PD + Y  L+    K   LS+    + +M S    +P+LVT   LI   C +    +A+ 
Sbjct: 187 PDSFTYNFLVKCLCKCRALSNVYSFIDEMRSSFDLEPNLVTYTILIDNVCNSKNLREAMR 246

Query: 315 QVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMKRVGIRPNEKTYNTLLVGLA 136
            +  + E G KPD F Y ++M G C   +  +A+    +MK  GI P+  TYNTL+ GL+
Sbjct: 247 LLGILRECGFKPDCFVYNTIMKGYCMLSKGSDAIQVFKKMKEEGIEPDLITYNTLIFGLS 306

Query: 135 RSDNISRAVDFFEDMVEN 82
           +   +S A  + + MVE+
Sbjct: 307 KGGRVSEAKRYLKIMVES 324



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
 Frame = -2

Query: 543 MSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNT 364
           +S    +   M + G  P +      +         D+A+++ K +S    KPD  T N 
Sbjct: 135 LSPVHQILNLMVNNGFMPTQVTVDIAVRALCSAGKEDDAVKLVKELSLKHSKPDSFTYNF 194

Query: 363 LIMIHCRNGQTDQALEQVKNMLEK-----GPKPDVFTYTSLMNGLCREGRVDEAVGALDE 199
           L+   C+     +AL  V + +++       +P++ TYT L++ +C    + EA+  L  
Sbjct: 195 LVKCLCKC----RALSNVYSFIDEMRSSFDLEPNLVTYTILIDNVCNSKNLREAMRLLGI 250

Query: 198 MKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDI 76
           ++  G +P+   YNT++ G       S A+  F+ M E  I
Sbjct: 251 LRECGFKPDCFVYNTIMKGYCMLSKGSDAIQVFKKMKEEGI 291


>ref|XP_006857185.1| hypothetical protein AMTR_s00065p00182300 [Amborella trichopoda]
           gi|548861268|gb|ERN18652.1| hypothetical protein
           AMTR_s00065p00182300 [Amborella trichopoda]
          Length = 470

 Score =  132 bits (332), Expect = 6e-29
 Identities = 67/166 (40%), Positives = 103/166 (62%)
 Frame = -2

Query: 552 AKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVT 373
           +K++ +A  L   + +AG  PD ++Y T+M G+  L+   EA+ VYK M E+GC+PDLVT
Sbjct: 255 SKNLREATRLLGVLGEAGYKPDCFLYNTIMKGYCLLDRGAEAITVYKKMREEGCEPDLVT 314

Query: 372 CNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMK 193
            NTLI      G+ D A++ ++ M+E+G  PD  TYTSLMNG+CR+G    A+  L EM+
Sbjct: 315 YNTLIYGLSNAGKEDIAMKYLRVMVEEGHLPDTVTYTSLMNGMCRKGNATGALELLKEME 374

Query: 192 RVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
             G  PN  TY+TLL GL ++ N+ + ++ +  M E  +++    Y
Sbjct: 375 DRGCEPNSCTYSTLLQGLFKAGNLDKGLEVYGVMKEGSMKMEAACY 420



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 6/157 (3%)
 Frame = -2

Query: 537 KAMDLFETMRDAGLS------PDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLV 376
           +A +LF+ +  + L       PD + +  L+    K        +        G +PDLV
Sbjct: 184 EACELFKDIASSNLKSRSSSPPDMFTFNFLVRHLCKTRAMSAVYQFIDEARALGLEPDLV 243

Query: 375 TCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEM 196
           T   LI   CR+    +A   +  + E G KPD F Y ++M G C   R  EA+    +M
Sbjct: 244 TYTILIDAVCRSKNLREATRLLGVLGEAGYKPDCFLYNTIMKGYCLLDRGAEAITVYKKM 303

Query: 195 KRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVE 85
           +  G  P+  TYNTL+ GL+ +     A+ +   MVE
Sbjct: 304 REEGCEPDLVTYNTLIYGLSNAGKEDIAMKYLRVMVE 340



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 6/149 (4%)
 Frame = -2

Query: 513 MRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYK------MMSEDGCKPDLVTCNTLIMI 352
           M  +G  PD      ++       L DEA E++K      + S     PD+ T N L+  
Sbjct: 157 MTASGFPPDNVSCDLIVRALCSSALEDEACELFKDIASSNLKSRSSSPPDMFTFNFLVRH 216

Query: 351 HCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMKRVGIRPN 172
            C+        + +      G +PD+ TYT L++ +CR   + EA   L  +   G +P+
Sbjct: 217 LCKTRAMSAVYQFIDEARALGLEPDLVTYTILIDAVCRSKNLREATRLLGVLGEAGYKPD 276

Query: 171 EKTYNTLLVGLARSDNISRAVDFFEDMVE 85
              YNT++ G    D  + A+  ++ M E
Sbjct: 277 CFLYNTIMKGYCLLDRGAEAITVYKKMRE 305


>ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355520709|gb|AET01163.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 501

 Score =  132 bits (331), Expect = 8e-29
 Identities = 66/171 (38%), Positives = 103/171 (60%)
 Frame = -2

Query: 567 CNARLAKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCK 388
           CN +  +  ++ +D+ E   + G  PD ++Y T+M G+  L+   EA+EVY  M E G +
Sbjct: 245 CNTKNLREATRLVDILE---EEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVE 301

Query: 387 PDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGA 208
           PDL+T NTLI    ++G+  +A + ++ M EKG  PD  TYTSLMNG+CR+G    A+  
Sbjct: 302 PDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALAL 361

Query: 207 LDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVENDIRINRDGY 55
           L+EM+  G  PN  TYNTLL GL +S    +A++ +  M  + ++++   Y
Sbjct: 362 LEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASY 412



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 1/157 (0%)
 Frame = -2

Query: 552 AKHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLN-LSDEALEVYKMMSEDGCKPDLV 376
           A  +  A++L + +     SPD Y Y  L+    K   LS     + +M ++   KP+LV
Sbjct: 176 ADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLV 235

Query: 375 TCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEM 196
           T   LI   C      +A   V  + E+G KPD F Y ++M G C   R  EA+   + M
Sbjct: 236 TYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRM 295

Query: 195 KRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMVE 85
           K  G+ P+  TYNTL+ GL++S  +S A      M E
Sbjct: 296 KEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAE 332



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 41/131 (31%), Positives = 62/131 (47%)
 Frame = -2

Query: 543 MSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNT 364
           +S+A  L   M + G  PD   Y +LMNG  +   +  AL + + M   GC P+  T NT
Sbjct: 320 VSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNT 379

Query: 363 LIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGALDEMKRVG 184
           L+   C++   D+A+E    M   G K D+ +Y + +  LC  GRV +A    D      
Sbjct: 380 LLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYEVFDYAVESK 439

Query: 183 IRPNEKTYNTL 151
              +   Y+TL
Sbjct: 440 SLSDVAAYSTL 450



 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
 Frame = -2

Query: 501 GLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQA 322
           G+SPD+      +      +  D+A+E+ K +S   C PD+ + N L+   C++      
Sbjct: 158 GISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLV 217

Query: 321 LEQVKNMLEK-GPKPDVFTYTSLMNGLCREGRVDEAVGALDEMKRVGIRPNEKTYNTLLV 145
              +  M  K   KP++ TYT L++ +C    + EA   +D ++  G +P+   YNT++ 
Sbjct: 218 YAFIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMK 277

Query: 144 GLARSDNISRAVDFFEDMVENDI 76
           G       S A++ +  M E  +
Sbjct: 278 GYCMLSRGSEAIEVYNRMKEKGV 300



 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 9/161 (5%)
 Frame = -2

Query: 549 KHMSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEAL-----EVYKMMSEDGCKP 385
           +HM+K    F        SPD+  Y  L+    K   S  +      +   +M  DG  P
Sbjct: 110 RHMTKTHPSF--------SPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISP 161

Query: 384 DLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDEAVGAL 205
           D  T +  +   C   + D A+E +K +  K   PD+++Y  L+  LC+   +      +
Sbjct: 162 DKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFI 221

Query: 204 DEMK-RVGIRPNEKTYNTLLVGLARSDNI---SRAVDFFED 94
           DEM+ +  ++PN  TY  L+  +  + N+   +R VD  E+
Sbjct: 222 DEMRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEE 262



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 32/97 (32%), Positives = 48/97 (49%)
 Frame = -2

Query: 534 AMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIM 355
           A+ L E M   G SP+   Y TL++G  K  + D+A+E+Y  M  DG K D+ +  T + 
Sbjct: 358 ALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVR 417

Query: 354 IHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGL 244
             C  G+   A E     +E     DV  Y++L + L
Sbjct: 418 ALCSVGRVADAYEVFDYAVESKSLSDVAAYSTLESTL 454