BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00028964
         (419 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21038.3| unnamed protein product [Vitis vinifera]              118   9e-25
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   118   9e-25
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   115   8e-24
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   113   3e-23
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   112   7e-23
ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago trunc...   109   3e-22
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   109   4e-22
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   109   4e-22
gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [L...   108   6e-22
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   108   6e-22
gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]       108   1e-21
ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   108   1e-21
ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   108   1e-21
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   108   1e-21
gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus pe...   107   1e-21
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   107   2e-21
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis...   107   2e-21
ref|XP_006842072.1| hypothetical protein AMTR_s00078p00055040 [A...   106   3e-21
gb|EPS62146.1| hypothetical protein M569_12646, partial [Genlise...   105   5e-21
ref|XP_003561343.1| PREDICTED: probable RNA-dependent RNA polyme...   105   5e-21

>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  118 bits (295), Expect = 9e-25
 Identities = 59/143 (41%), Positives = 89/143 (62%), Gaps = 4/143 (2%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S P +YYRTADDD++  V + LLDD+DPWIRT DFT   A GRC  YRI +  + G  ++
Sbjct: 62  SSPFVYYRTADDDIEETVPFDLLDDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKLK 121

Query: 237 DCKQYL--KRYSLFDDENEFPDFTLNVR--PEGSVPRCWWCFTVPRQESIPFKTLFLLNG 70
               YL  +R ++ +D    P + L VR  P+  +P     F +  +E I F+ +FL+N 
Sbjct: 122 KAMDYLRARRVNVLEDS---PKWQLRVRDEPDFGLPMSDPFFCIQHKEGIDFRVMFLVNA 178

Query: 69  LLHKGILNYHSLNEEFYELCSSE 1
           ++HKGI+N H L+++F++L  S+
Sbjct: 179 VMHKGIINQHQLSDKFFDLLRSQ 201


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  118 bits (295), Expect = 9e-25
 Identities = 59/143 (41%), Positives = 89/143 (62%), Gaps = 4/143 (2%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S P +YYRTADDD++  V + LLDD+DPWIRT DFT   A GRC  YRI +  + G  ++
Sbjct: 224 SSPFVYYRTADDDIEETVPFDLLDDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKLK 283

Query: 237 DCKQYL--KRYSLFDDENEFPDFTLNVR--PEGSVPRCWWCFTVPRQESIPFKTLFLLNG 70
               YL  +R ++ +D    P + L VR  P+  +P     F +  +E I F+ +FL+N 
Sbjct: 284 KAMDYLRARRVNVLEDS---PKWQLRVRDEPDFGLPMSDPFFCIQHKEGIDFRVMFLVNA 340

Query: 69  LLHKGILNYHSLNEEFYELCSSE 1
           ++HKGI+N H L+++F++L  S+
Sbjct: 341 VMHKGIINQHQLSDKFFDLLRSQ 363


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1200

 Score =  115 bits (287), Expect = 8e-24
 Identities = 55/141 (39%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S P ++YRTADDD++  V + LLDD+DPWIRT DFT   A GRC  YR+ +  + G  + 
Sbjct: 224 SAPWVWYRTADDDIEAWVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLR 283

Query: 237 DCKQYLK--RYSLFDDENEFPDFTLNVRPEGSVPRCWWCFTVPRQESIPFKTLFLLNGLL 64
              +YLK  R  +  +EN      +   P+  +P     F +  +E I F+ LFL+N ++
Sbjct: 284 KAVKYLKERRVQVLQEENHRRRIRILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVNAVM 343

Query: 63  HKGILNYHSLNEEFYELCSSE 1
           HKGI N H L+ +F++L  ++
Sbjct: 344 HKGIFNQHQLSNDFFDLLRNQ 364


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223545464|gb|EEF46969.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 1203

 Score =  113 bits (282), Expect = 3e-23
 Identities = 53/139 (38%), Positives = 83/139 (59%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S PS++YRTADDD++V V + LLDD+DPWIRT DFT   A GRC  YR+ +  + G  ++
Sbjct: 224 SAPSVWYRTADDDIEVLVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLK 283

Query: 237 DCKQYLKRYSLFDDENEFPDFTLNVRPEGSVPRCWWCFTVPRQESIPFKTLFLLNGLLHK 58
               +L+   + +D    P   +   PE  +P     F +  +E + F  +FL+N ++HK
Sbjct: 284 RALNFLRERRVQEDCLRRP-LHVTAEPEYEMPMSDPFFCIHHEEGVDFNLMFLVNAVMHK 342

Query: 57  GILNYHSLNEEFYELCSSE 1
           GI N H L++ F++L  ++
Sbjct: 343 GIFNQHQLSDSFFDLLRNQ 361


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1198

 Score =  112 bits (279), Expect = 7e-23
 Identities = 53/139 (38%), Positives = 81/139 (58%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S P ++YRTADDD++V V + LLDD+DPWIRT DFT   A GRC  YR+ +  + G  + 
Sbjct: 224 SAPRVWYRTADDDIEVSVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLR 283

Query: 237 DCKQYLKRYSLFDDENEFPDFTLNVRPEGSVPRCWWCFTVPRQESIPFKTLFLLNGLLHK 58
               +LK   + ++    P   +   P+  +P     F +  +E I F  LFL+N ++HK
Sbjct: 284 KAVDFLKERRVQEEYLRRP-IRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHK 342

Query: 57  GILNYHSLNEEFYELCSSE 1
           GI N H L+ +F++L  ++
Sbjct: 343 GIFNQHQLSNDFFDLLRNQ 361


>ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago truncatula]
           gi|355492457|gb|AES73660.1| Rna-dependent RNA polymerase
           [Medicago truncatula]
          Length = 1188

 Score =  109 bits (273), Expect = 3e-22
 Identities = 56/139 (40%), Positives = 81/139 (58%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S P ++YRTADDD+D  V   LLDD+DPWIRT DFT   A GRC  YRI +  + G  + 
Sbjct: 211 SSPLVWYRTADDDIDESVTIDLLDDDDPWIRTTDFTPSGAIGRCNYYRISIPPRHGAKLN 270

Query: 237 DCKQYLKRYSLFDDENEFPDFTLNVRPEGSVPRCWWCFTVPRQESIPFKTLFLLNGLLHK 58
              +YL+R  +     + P    N  P+  VP     F +  Q+ I F  +FL+N ++H+
Sbjct: 271 KALEYLRRQRVPRIPLKRPPKIQN-EPDFGVPMSDAFFYIDSQKDISFDIMFLINAIVHR 329

Query: 57  GILNYHSLNEEFYELCSSE 1
           GI N +SL+ +F+EL  ++
Sbjct: 330 GIFNQYSLSNKFFELLKNQ 348


>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
           sinensis]
          Length = 1025

 Score =  109 bits (272), Expect = 4e-22
 Identities = 55/135 (40%), Positives = 80/135 (59%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S P ++YRTADDD+ V V + +LDD+DPWIRT DFT   A GRC  YRI +S++    + 
Sbjct: 224 SSPRVWYRTADDDILVLVPFDMLDDDDPWIRTTDFTPSGAIGRCNSYRISISSRHRGKLS 283

Query: 237 DCKQYLKRYSLFDDENEFPDFTLNVRPEGSVPRCWWCFTVPRQESIPFKTLFLLNGLLHK 58
               YL    +  D    P  T+   P+  VP     F +  +E I F+ +FL+N ++HK
Sbjct: 284 KVITYLGERRVQVDSLSRP-ITIREEPDFEVPMSDPFFCIHYEEGISFEIMFLVNAVMHK 342

Query: 57  GILNYHSLNEEFYEL 13
           GI+N H L++ F++L
Sbjct: 343 GIINQHQLSDSFFDL 357


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
           sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
           sinensis]
          Length = 1197

 Score =  109 bits (272), Expect = 4e-22
 Identities = 55/135 (40%), Positives = 80/135 (59%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S P ++YRTADDD+ V V + +LDD+DPWIRT DFT   A GRC  YRI +S++    + 
Sbjct: 224 SSPRVWYRTADDDILVLVPFDMLDDDDPWIRTTDFTPSGAIGRCNSYRISISSRHRGKLS 283

Query: 237 DCKQYLKRYSLFDDENEFPDFTLNVRPEGSVPRCWWCFTVPRQESIPFKTLFLLNGLLHK 58
               YL    +  D    P  T+   P+  VP     F +  +E I F+ +FL+N ++HK
Sbjct: 284 KVITYLGERRVQVDSLSRP-ITIREEPDFEVPMSDPFFCIHYEEGISFEIMFLVNAVMHK 342

Query: 57  GILNYHSLNEEFYEL 13
           GI+N H L++ F++L
Sbjct: 343 GIINQHQLSDSFFDL 357


>gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [Lotus japonicus]
          Length = 1201

 Score =  108 bits (271), Expect = 6e-22
 Identities = 58/142 (40%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S P ++YRTADDD++  V + LLDD+DPWIRT DFT   A GRC  YRI +  + G  + 
Sbjct: 224 SSPLVWYRTADDDIEESVSFDLLDDDDPWIRTTDFTPSGAIGRCNFYRISIPPRHGAKLM 283

Query: 237 DCKQYLKRYSLFDDENEFP---DFTLNVRPEGSVPRCWWCFTVPRQESIPFKTLFLLNGL 67
               YL     F    EFP      +   P   VP     F +  QE I F  +FL+N +
Sbjct: 284 KAMAYLN----FQRVQEFPLKRPLRIQDEPNFGVPMSDDFFYIHCQEGITFDIMFLVNAV 339

Query: 66  LHKGILNYHSLNEEFYELCSSE 1
           +HKGILN +SL++ F+E+  ++
Sbjct: 340 IHKGILNPYSLSDRFFEVLRNQ 361


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca
           subsp. vesca]
          Length = 1197

 Score =  108 bits (271), Expect = 6e-22
 Identities = 57/139 (41%), Positives = 82/139 (58%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S P + YRTADDD+D  V + LLDD+DPWIRT DFT   A GRC  YR+L+  + G  ++
Sbjct: 224 SSPWVSYRTADDDIDQSVLFDLLDDDDPWIRTTDFTPTGAIGRCNYYRVLIPPRHGAKLK 283

Query: 237 DCKQYLKRYSLFDDENEFPDFTLNVRPEGSVPRCWWCFTVPRQESIPFKTLFLLNGLLHK 58
               YLK   + +   + P   +   P    P     F++  Q++I F  LFL+N ++HK
Sbjct: 284 KAMIYLKERRVQELFIKKPP-RIQDEPGFGNPMSDALFSIHYQKNISFDILFLVNAVMHK 342

Query: 57  GILNYHSLNEEFYELCSSE 1
           GILN H L+E F++L  ++
Sbjct: 343 GILNQHQLSESFFDLLRNQ 361


>gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
          Length = 1194

 Score =  108 bits (269), Expect = 1e-21
 Identities = 52/135 (38%), Positives = 80/135 (59%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S P ++YRTADDD++V V + LLDD+DPWIRT DFT   A GRC  YR+ +  + G  ++
Sbjct: 220 SSPRVWYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGSKLK 279

Query: 237 DCKQYLKRYSLFDDENEFPDFTLNVRPEGSVPRCWWCFTVPRQESIPFKTLFLLNGLLHK 58
               YL+   + +         +   P+ +VP     F V  +  IPF+ +FLLN ++HK
Sbjct: 280 KAMSYLRERRVQETPLR-KALRIQSEPDFAVPMSDPIFYVHGKHGIPFEIMFLLNVIVHK 338

Query: 57  GILNYHSLNEEFYEL 13
           GI N H++++  ++L
Sbjct: 339 GIFNQHNISDGLFDL 353


>ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Cicer
           arietinum] gi|502132369|ref|XP_004501326.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X3 [Cicer
           arietinum]
          Length = 1201

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/139 (41%), Positives = 81/139 (58%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S P ++YRTADDD++  V   LLDD+DPWIRT DFT   A GRC  YRI +  + G  + 
Sbjct: 224 SSPLVWYRTADDDIEESVTIDLLDDDDPWIRTTDFTPSGAIGRCNFYRISIPPRYGAKLN 283

Query: 237 DCKQYLKRYSLFDDENEFPDFTLNVRPEGSVPRCWWCFTVPRQESIPFKTLFLLNGLLHK 58
              +YL+   +     + P   LN  P+  VP     F +  Q+ I F  +FL+N ++HK
Sbjct: 284 KAMEYLRCQRVQRVPLKRPLRILN-EPDFGVPMSSAFFYIDFQKDITFDIMFLINAIVHK 342

Query: 57  GILNYHSLNEEFYELCSSE 1
           GI N +SL+ +F+EL  S+
Sbjct: 343 GIFNQYSLSYKFFELLRSQ 361


>ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Cicer
           arietinum]
          Length = 1247

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/139 (41%), Positives = 81/139 (58%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S P ++YRTADDD++  V   LLDD+DPWIRT DFT   A GRC  YRI +  + G  + 
Sbjct: 270 SSPLVWYRTADDDIEESVTIDLLDDDDPWIRTTDFTPSGAIGRCNFYRISIPPRYGAKLN 329

Query: 237 DCKQYLKRYSLFDDENEFPDFTLNVRPEGSVPRCWWCFTVPRQESIPFKTLFLLNGLLHK 58
              +YL+   +     + P   LN  P+  VP     F +  Q+ I F  +FL+N ++HK
Sbjct: 330 KAMEYLRCQRVQRVPLKRPLRILN-EPDFGVPMSSAFFYIDFQKDITFDIMFLINAIVHK 388

Query: 57  GILNYHSLNEEFYELCSSE 1
           GI N +SL+ +F+EL  S+
Sbjct: 389 GIFNQYSLSYKFFELLRSQ 407


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score =  108 bits (269), Expect = 1e-21
 Identities = 55/139 (39%), Positives = 80/139 (57%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S P I+YRTADDD+   V Y LLDD+DPWIRT DFT   A GRC  +R+ V  + G  + 
Sbjct: 223 SSPCIWYRTADDDIAKLVPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLN 282

Query: 237 DCKQYLKRYSLFDDENEFPDFTLNVRPEGSVPRCWWCFTVPRQESIPFKTLFLLNGLLHK 58
           +   YLK   +       P   LN  P+  V      F +  ++ I F+ LFL+N ++HK
Sbjct: 283 NAMNYLKEQRVHQVSLNRPPKILN-EPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHK 341

Query: 57  GILNYHSLNEEFYELCSSE 1
           GI+N H +++ F++L  ++
Sbjct: 342 GIINQHQMSDRFFDLLRNQ 360


>gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score =  107 bits (268), Expect = 1e-21
 Identities = 52/139 (37%), Positives = 82/139 (58%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S P + YRTADDD+D  V + LLDD+DPWIRT DFT   A GRC  YR+L+  + G  ++
Sbjct: 223 SSPWVSYRTADDDIDQSVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKLK 282

Query: 237 DCKQYLKRYSLFDDENEFPDFTLNVRPEGSVPRCWWCFTVPRQESIPFKTLFLLNGLLHK 58
               YL+   + +   ++P   +   P+  +      F++  +E I F+ +FL+N ++HK
Sbjct: 283 KAMNYLRERRVKEVCIKWPP-KIQDEPDFGMSNTEPFFSIQYEEGISFEIMFLVNAVMHK 341

Query: 57  GILNYHSLNEEFYELCSSE 1
           G +N H L++ F+ L  S+
Sbjct: 342 GTVNQHQLSDSFFHLLRSQ 360


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571459266|ref|XP_006581359.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score =  107 bits (266), Expect = 2e-21
 Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S P ++YRTADDD++  V + LLDD+DPWIRT DFT   A GRC  YRI +  + G  + 
Sbjct: 224 SSPWVWYRTADDDIEESVPFDLLDDDDPWIRTTDFTPSGAIGRCNFYRISIPPRHGAKLM 283

Query: 237 DCKQYLKRYSLFDDENEFPDF--TLNVRPEGSVPRCWWCFTVPRQESIPFKTLFLLNGLL 64
               YLK   +   E        TLN  P+  VP     F +  Q+ I F  +FL+N ++
Sbjct: 284 KAMLYLKGQRVQMQELALKQTLRTLN-EPDFGVPMSDAFFYIHFQKDIAFDIMFLVNAIV 342

Query: 63  HKGILNYHSLNEEFYELCSSE 1
           HKGI N H L++ F+EL  ++
Sbjct: 343 HKGIFNQHRLSDRFFELLKNQ 363


>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
           gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
           6 [Cucumis sativus]
          Length = 1197

 Score =  107 bits (266), Expect = 2e-21
 Identities = 54/137 (39%), Positives = 79/137 (57%)
 Frame = -3

Query: 411 PSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVEDC 232
           P I+YRTADDD+   V Y LLDD+DPWIRT DFT   A GRC  +R+ V  + G  + + 
Sbjct: 225 PCIWYRTADDDIAKLVPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNA 284

Query: 231 KQYLKRYSLFDDENEFPDFTLNVRPEGSVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGI 52
             YLK   +       P   LN  P+  V      F +  ++ I F+ LFL+N ++HKGI
Sbjct: 285 MNYLKEQRVHQVSLNRPPKILN-EPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGI 343

Query: 51  LNYHSLNEEFYELCSSE 1
           +N H +++ F++L  ++
Sbjct: 344 INQHQMSDRFFDLLRNQ 360


>ref|XP_006842072.1| hypothetical protein AMTR_s00078p00055040 [Amborella trichopoda]
           gi|548844121|gb|ERN03747.1| hypothetical protein
           AMTR_s00078p00055040 [Amborella trichopoda]
          Length = 1207

 Score =  106 bits (265), Expect = 3e-21
 Identities = 57/147 (38%), Positives = 82/147 (55%), Gaps = 8/147 (5%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S P IYYRT +DD  V V + LLDDEDPWIRT DFT   A GRC CY+I  S + G  +E
Sbjct: 225 SSPLIYYRTDNDDTHVTVPFLLLDDEDPWIRTTDFTGNGAVGRCRCYKISFSPRYGLKME 284

Query: 237 DCKQYLKRYSLFD--------DENEFPDFTLNVRPEGSVPRCWWCFTVPRQESIPFKTLF 82
             + Y +   + +           ++P   ++  P    P     F+V  QE + F+ ++
Sbjct: 285 KARDYFRECRILEHGVLQKVLGPQDYPP-KVSTEPGFMKPMRNHFFSVNIQEGLSFEVVY 343

Query: 81  LLNGLLHKGILNYHSLNEEFYELCSSE 1
           L+  L+HKGI+N H L +EF++L  S+
Sbjct: 344 LVTCLVHKGIINQHRLCKEFFDLLRSQ 370


>gb|EPS62146.1| hypothetical protein M569_12646, partial [Genlisea aurea]
          Length = 1195

 Score =  105 bits (263), Expect = 5e-21
 Identities = 59/143 (41%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
 Frame = -3

Query: 417 SPPSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVE 238
           S P IYYRTADDD++  V + LL+D+DPWIRT DFT   A GRC  YRI V    G  + 
Sbjct: 217 SSPLIYYRTADDDIEDAVPFDLLEDDDPWIRTTDFTSTGAIGRCNTYRISVRPLSGPQLL 276

Query: 237 DCKQY--LKRYSLFDDENEFPDFTLNVRPEGSVPRCWW--CFTVPRQESIPFKTLFLLNG 70
               Y  L+R  +FD   EF    + V  E           F +   + + FK  FL+N 
Sbjct: 277 KALDYLRLRRVKVFD---EFKGKHIRVMDEPGFGTLMSDPFFCIQNVKGLSFKITFLVNA 333

Query: 69  LLHKGILNYHSLNEEFYELCSSE 1
           +LH GI+NYH + EEF++L  ++
Sbjct: 334 VLHSGIINYHQMTEEFFDLLRTQ 356


>ref|XP_003561343.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2-like
           [Brachypodium distachyon]
          Length = 1208

 Score =  105 bits (263), Expect = 5e-21
 Identities = 61/140 (43%), Positives = 76/140 (54%), Gaps = 5/140 (3%)
 Frame = -3

Query: 411 PSIYYRTADDDVDVKVRYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKMGHAVEDC 232
           P +YYRTADDD+ V V + LLDD+DPWIRT D T   A GRC  YRI V+ +    ++  
Sbjct: 235 PRVYYRTADDDIHVSVPFDLLDDDDPWIRTTDITMSGAIGRCGMYRIKVAPRKWIMMDRA 294

Query: 231 KQYLKRYSLFDDENEF---PDFTLNVR--PEGSVPRCWWCFTVPRQESIPFKTLFLLNGL 67
             Y+K   +   E+     P   L VR  PE   P     F V   E + F  LFL+N L
Sbjct: 295 LAYMKGQRVLIVESTVWSGPRRGLKVRDEPEFEEPMQDLFFCVQHAEGLKFPVLFLVNAL 354

Query: 66  LHKGILNYHSLNEEFYELCS 7
           +HKGI+N H L  EF  L S
Sbjct: 355 VHKGIINQHQLTPEFLSLLS 374