BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00028821
         (497 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002520003.1| hypothetical protein EpeqC_p069 (chloroplast...   331   7e-89
ref|YP_008082239.1| hypothetical protein (chloroplast) [Gnetum m...   146   2e-33
ref|YP_002519738.1| hypothetical protein GnpaC_p010 [Gnetum parv...   146   2e-33
ref|YP_001876624.1| hypothetical chloroplast RF1 [Welwitschia mi...   114   1e-23
dbj|BAH11181.1| hypothetical protein (chloroplast) [Welwitschia ...   112   7e-23

>ref|YP_002520003.1| hypothetical protein EpeqC_p069 (chloroplast) [Ephedra equisetina]
            gi|220983604|dbj|BAH11371.1| hypothetical protein
            (chloroplast) [Ephedra equisetina]
          Length = 2018

 Score =  331 bits (848), Expect = 7e-89
 Identities = 164/165 (99%), Positives = 165/165 (100%)
 Frame = -1

Query: 497  EEEKLKETNKSKDIELNSIQNKEMNLSTPSFQKIEENEVRKELPQWESDLIQDFLYEEQT 318
            EEEKLKETNKSKDIELNSIQNKEMNLSTPSFQKIEE+EVRKELPQWESDLIQDFLYEEQT
Sbjct: 774  EEEKLKETNKSKDIELNSIQNKEMNLSTPSFQKIEESEVRKELPQWESDLIQDFLYEEQT 833

Query: 317  NKSDFRAAPLKNVGYYEDEYGDDTELFVRAKHASCNNRLYMFKGSIRSRKGRSIKPFRLN 138
            NKSDFRAAPLKNVGYYEDEYGDDTELFVRAKHASCNNRLYMFKGSIRSRKGRSIKPFRLN
Sbjct: 834  NKSDFRAAPLKNVGYYEDEYGDDTELFVRAKHASCNNRLYMFKGSIRSRKGRSIKPFRLN 893

Query: 137  FRSLKKQIHSPVVCRMKNKSYINRKIDFQIILVSILNFRIRSLCK 3
            FRSLKKQIHSPVVCRMKNKSYINRKIDFQIILVSILNFRIRSLCK
Sbjct: 894  FRSLKKQIHSPVVCRMKNKSYINRKIDFQIILVSILNFRIRSLCK 938


>ref|YP_008082239.1| hypothetical protein (chloroplast) [Gnetum montanum]
            gi|490345065|gb|AGL11085.1| hypothetical protein
            (chloroplast) [Gnetum montanum]
          Length = 2349

 Score =  146 bits (369), Expect = 2e-33
 Identities = 81/163 (49%), Positives = 106/163 (65%)
 Frame = -1

Query: 491  EKLKETNKSKDIELNSIQNKEMNLSTPSFQKIEENEVRKELPQWESDLIQDFLYEEQTNK 312
            E+L E  K K +E   I+ +  N    +F ++   ++ KELP+ E  LIQD+ YE+QTN 
Sbjct: 842  ERLIEVKKKKRMEFKCIKQRTNN----NFFRVY-GDITKELPEGEHYLIQDYEYEDQTNY 896

Query: 311  SDFRAAPLKNVGYYEDEYGDDTELFVRAKHASCNNRLYMFKGSIRSRKGRSIKPFRLNFR 132
            SDFRAAPLKN+ YYE+    D +  ++ KHASCNNRLYMFKG+ R RKG+ +KPFR   R
Sbjct: 897  SDFRAAPLKNMAYYEE---GDQQFLLKGKHASCNNRLYMFKGTTRPRKGKCVKPFRAPLR 953

Query: 131  SLKKQIHSPVVCRMKNKSYINRKIDFQIILVSILNFRIRSLCK 3
            SLK Q HSP+V +M  K +  RK DFQ +  SI  F+IR   K
Sbjct: 954  SLKNQAHSPLVLQM--KKFQKRKPDFQKVRTSIQKFQIRLFWK 994


>ref|YP_002519738.1| hypothetical protein GnpaC_p010 [Gnetum parvifolium]
            gi|220983480|dbj|BAH11248.1| hypothetical protein
            (chloroplast) [Gnetum parvifolium]
          Length = 1540

 Score =  146 bits (369), Expect = 2e-33
 Identities = 81/163 (49%), Positives = 106/163 (65%)
 Frame = -1

Query: 491  EKLKETNKSKDIELNSIQNKEMNLSTPSFQKIEENEVRKELPQWESDLIQDFLYEEQTNK 312
            E+L E  K K +E   I+ +  N    +F ++   ++ KELP+ E  LIQD+ YE+QTN 
Sbjct: 842  ERLIEVKKKKRMEFKCIKQRTNN----NFFRVY-GDITKELPEGEHYLIQDYEYEDQTNY 896

Query: 311  SDFRAAPLKNVGYYEDEYGDDTELFVRAKHASCNNRLYMFKGSIRSRKGRSIKPFRLNFR 132
            SDFRAAPLKN+ YYE+    D +  ++ KHASCNNRLYMFKG+ R RKG+ +KPFR   R
Sbjct: 897  SDFRAAPLKNMAYYEE---GDQQFLLKGKHASCNNRLYMFKGTTRPRKGKCVKPFRAPLR 953

Query: 131  SLKKQIHSPVVCRMKNKSYINRKIDFQIILVSILNFRIRSLCK 3
            SLK Q HSP+V +M  K +  RK DFQ +  SI  F+IR   K
Sbjct: 954  SLKNQAHSPLVLQM--KKFQKRKPDFQKVRTSIQKFQIRLFWK 994


>ref|YP_001876624.1| hypothetical chloroplast RF1 [Welwitschia mirabilis]
            gi|163311679|gb|ABY26837.1| hypothetical chloroplast RF1
            [Welwitschia mirabilis]
          Length = 2659

 Score =  114 bits (286), Expect = 1e-23
 Identities = 63/145 (43%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
 Frame = -1

Query: 419  STPSFQKIEENEVRKELPQWESDLIQDFLYEEQTNKSDFRAAPLKNVGYYEDEYGDDTEL 240
            S  SF K   NE++KELP+WES+L++D  YE +TN SDF  APLKNVGY ++    + + 
Sbjct: 961  SVLSFDK--SNEIQKELPEWESNLVEDIDYENKTNSSDFSPAPLKNVGYNDENPFLNEKQ 1018

Query: 239  FVRAKHASCNNRLYMFKGSIRSRKGRSIKPFRLNFRSLKKQIHSPVVCRMKNKSYINRKI 60
            F   +H  CNNR YMFK + R R+G+S +P+++NFR  KKQ ++  V RMK K   N   
Sbjct: 1019 FEVHRHVVCNNRQYMFKEAFRCRRGKSTRPWKVNFRCFKKQRYAHFVLRMKEKPKENENF 1078

Query: 59   ------DFQIILVSILNFRIRSLCK 3
                  DF  IL   ++F I+ + +
Sbjct: 1079 FRDFVRDFDKIL---MDFDIKKILR 1100


>dbj|BAH11181.1| hypothetical protein (chloroplast) [Welwitschia mirabilis]
          Length = 2575

 Score =  112 bits (279), Expect = 7e-23
 Identities = 62/145 (42%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
 Frame = -1

Query: 419  STPSFQKIEENEVRKELPQWESDLIQDFLYEEQTNKSDFRAAPLKNVGYYEDEYGDDTEL 240
            S  SF K   NE++KELP+W S+L++D  YE +TN SDF  APLKNVGY ++    + + 
Sbjct: 914  SVLSFDK--SNEIQKELPEWGSNLVEDIDYENKTNSSDFSPAPLKNVGYNDENPFLNEKQ 971

Query: 239  FVRAKHASCNNRLYMFKGSIRSRKGRSIKPFRLNFRSLKKQIHSPVVCRMKNKSYINRKI 60
            F   +H  CNNR YMFK + R R+G+S +P+++NFR  KKQ ++  V RMK K   N   
Sbjct: 972  FEVHRHVVCNNRQYMFKEAFRCRRGKSTRPWKVNFRCFKKQRYAHFVLRMKEKPKENENF 1031

Query: 59   ------DFQIILVSILNFRIRSLCK 3
                  DF  IL   ++F I+ + +
Sbjct: 1032 FRDFVRDFDKIL---MDFDIKKILR 1053