BLASTX nr result
ID: Ephedra27_contig00028813
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00028813
(1100 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521681.1| pentatricopeptide repeat-containing protein,... 157 9e-36
ref|XP_006857185.1| hypothetical protein AMTR_s00065p00182300 [A... 153 1e-34
gb|AAM62704.1| unknown [Arabidopsis thaliana] 151 4e-34
gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily p... 150 9e-34
ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutr... 150 1e-33
ref|NP_973481.1| pentatricopeptide repeat-containing protein [Ar... 149 1e-33
ref|NP_565422.1| pentatricopeptide repeat-containing protein [Ar... 149 1e-33
ref|XP_002884075.1| pentatricopeptide repeat-containing protein ... 149 1e-33
ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containi... 149 2e-33
ref|XP_004232547.1| PREDICTED: pentatricopeptide repeat-containi... 149 2e-33
emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera] 149 2e-33
ref|XP_003626687.1| Pentatricopeptide repeat-containing protein ... 147 6e-33
ref|XP_006340813.1| PREDICTED: pentatricopeptide repeat-containi... 147 7e-33
ref|XP_004163411.1| PREDICTED: pentatricopeptide repeat-containi... 144 6e-32
ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containi... 144 8e-32
ref|XP_006405989.1| hypothetical protein EUTSA_v10028308mg [Eutr... 143 1e-31
ref|XP_004287745.1| PREDICTED: pentatricopeptide repeat-containi... 143 1e-31
ref|XP_004293246.1| PREDICTED: pentatricopeptide repeat-containi... 141 5e-31
ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containi... 140 1e-30
ref|XP_002306437.1| pentatricopeptide repeat-containing family p... 140 1e-30
>ref|XP_002521681.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539072|gb|EEF40668.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 458
Score = 157 bits (396), Expect = 9e-36
Identities = 89/263 (33%), Positives = 154/263 (58%), Gaps = 6/263 (2%)
Frame = +3
Query: 330 QQLLKSKTLSEAKDLYETIITTRRRP-NFNTHHVLLRKFAKNTMKEDALKLFLFM-KERG 503
++L KS L+EAK+++ ++I+T R P + HH L+ ++ + +D++ L M K
Sbjct: 52 KRLFKSPELNEAKEIFNSLISTTRVPLDLRFHHSFLQSYSSISTIDDSISLLRHMIKTLP 111
Query: 504 AFKPNIITFNVLLADCSKTGE--LDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHE 677
+F P I T+++LL+ K + L V +IL LM ++ MP +VT D+ VRA CSAG+ +
Sbjct: 112 SFTPTISTYHILLSQSCKAPDPTLSPVHQILNLMVNNGFMPTQVTVDIAVRALCSAGKED 171
Query: 678 RACEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR--VKLQPDKFTYSIL 851
A ++ E++ + PD ++N L++ LCK + D+MR L+P+ TY+IL
Sbjct: 172 DAVKLVKELSLKHSKPDSFTYNFLVKCLCKCRALSNVYSFIDEMRSSFDLEPNLVTYTIL 231
Query: 852 MEGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLE 1031
++ + NS K++ AM L +++ D FVYNT++ G+ + + + V+++M E
Sbjct: 232 IDNVCNS---KNLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDAIQVFKKMKE 288
Query: 1032 QKCEPDVVTYNTLIIHYSKVGNM 1100
+ EPD++TYNTLI SK G +
Sbjct: 289 EGIEPDLITYNTLIFGLSKGGRV 311
Score = 85.5 bits (210), Expect = 3e-14
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 2/240 (0%)
Frame = +3
Query: 360 EAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFNVL 539
+A L + + +P+ T++ L++ K + M+ +PN++T+ +L
Sbjct: 172 DAVKLVKELSLKHSKPDSFTYNFLVKCLCKCRALSNVYSFIDEMRSSFDLEPNLVTYTIL 231
Query: 540 LADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQEI 719
+ + + L R+L ++ + PD Y+ +++ +C + A ++F +M + I
Sbjct: 232 IDNVCNSKNLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDAIQVFKKMKEEGI 291
Query: 720 GPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVKLQ--PDKFTYSILMEGLSNSKSKKHMN 893
PDL+++N L+ L K V A + K+ V+ PD TY+ LM GL K
Sbjct: 292 EPDLITYNTLIFGLSKGGRVSEA-KRYLKIMVESGHFPDAVTYTSLMNGLCR---KGDAL 347
Query: 894 SAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEPDVVTYNTLI 1073
A+ L + M+ C + YNTL+ G K R +++Y + E D +Y T +
Sbjct: 348 GALALLEDMEMKGCSPNSCTYNTLLYGLCKERLLEKGIELYNVIKEGGMLLDTASYATFV 407
Score = 84.3 bits (207), Expect = 8e-14
Identities = 52/217 (23%), Positives = 108/217 (49%), Gaps = 1/217 (0%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
L + SK L EA L + +P+ ++ +++ + + DA+++F MKE G
Sbjct: 231 LIDNVCNSKNLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDAIQVFKKMKEEG 290
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
+P++IT+N L+ SK G + +R L++M + PD VTY ++ C G+ A
Sbjct: 291 -IEPDLITYNTLIFGLSKGGRVSEAKRYLKIMVESGHFPDAVTYTSLMNGLCRKGDALGA 349
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRV-KLQPDKFTYSILMEG 860
+ +M + P+ ++N LL LCK L+++ +++++ ++ + D +Y+ +
Sbjct: 350 LALLEDMEMKGCSPNSCTYNTLLYGLCKERLLEKGIELYNVIKEGGMLLDTASYATFVRA 409
Query: 861 LSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLIS 971
L + + A +++ +S+ + + Y TL S
Sbjct: 410 LCR---EGKVAEAYEVFDYAVESKSLTNAAAYTTLES 443
>ref|XP_006857185.1| hypothetical protein AMTR_s00065p00182300 [Amborella trichopoda]
gi|548861268|gb|ERN18652.1| hypothetical protein
AMTR_s00065p00182300 [Amborella trichopoda]
Length = 470
Score = 153 bits (387), Expect = 1e-34
Identities = 91/267 (34%), Positives = 142/267 (53%), Gaps = 9/267 (3%)
Frame = +3
Query: 321 ELTQQLLKSKTLSEAKDLYETIITTRRRPNFNT-HHVLLRKFAK-NTMKEDALKLFLFMK 494
+L L K+ ++SEAK Y+ + R H+ LL+ F ++L L MK
Sbjct: 63 KLPLNLFKTPSISEAKATYDAALAARGHTRSTPFHNALLKDFCLLRPNLPNSLSLVHHMK 122
Query: 495 ERGAFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEH 674
E+ F P+ TFN++L C ++ V + L LMT PD V+ DL+VRA CS+
Sbjct: 123 EKSGFAPDHATFNIILGLCCSNADMAAVHQTLALMTASGFPPDNVSCDLIVRALCSSALE 182
Query: 675 ERACEIFTEMTSQEI------GPDLVSFNILLRSLCKNNLVDRAMDMFDKMR-VKLQPDK 833
+ ACE+F ++ S + PD+ +FN L+R LCK + D+ R + L+PD
Sbjct: 183 DEACELFKDIASSNLKSRSSSPPDMFTFNFLVRHLCKTRAMSAVYQFIDEARALGLEPDL 242
Query: 834 FTYSILMEGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDV 1013
TY+IL++ + S K++ A L + ++ D F+YNT++ G+ + A + V
Sbjct: 243 VTYTILIDAVCRS---KNLREATRLLGVLGEAGYKPDCFLYNTIMKGYCLLDRGAEAITV 299
Query: 1014 YEEMLEQKCEPDVVTYNTLIIHYSKVG 1094
Y++M E+ CEPD+VTYNTLI S G
Sbjct: 300 YKKMREEGCEPDLVTYNTLIYGLSNAG 326
Score = 83.2 bits (204), Expect = 2e-13
Identities = 64/263 (24%), Positives = 122/263 (46%), Gaps = 11/263 (4%)
Frame = +3
Query: 318 CELTQQLLKSKTLS-EAKDLYETIITTRRR------PNFNTHHVLLRKFAKNTMKEDALK 476
C+L + L S L EA +L++ I ++ + P+ T + L+R K T A+
Sbjct: 169 CDLIVRALCSSALEDEACELFKDIASSNLKSRSSSPPDMFTFNFLVRHLCK-TRAMSAVY 227
Query: 477 LFLFMKERGAFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAF 656
F+ +P+++T+ +L+ ++ L R+L ++ + PD Y+ +++ +
Sbjct: 228 QFIDEARALGLEPDLVTYTILIDAVCRSKNLREATRLLGVLGEAGYKPDCFLYNTIMKGY 287
Query: 657 CSAGEHERACEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVKLQ---- 824
C A ++ +M + PDLV++N L+ L D AM +RV ++
Sbjct: 288 CLLDRGAEAITVYKKMREEGCEPDLVTYNTLIYGLSNAGKEDIAMKY---LRVMVEEGHL 344
Query: 825 PDKFTYSILMEGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGV 1004
PD TY+ LM G+ K + A++L ++M+D C + Y+TL+ G K
Sbjct: 345 PDTVTYTSLMNGMCR---KGNATGALELLKEMEDRGCEPNSCTYSTLLQGLFKAGNLDKG 401
Query: 1005 VDVYEEMLEQKCEPDVVTYNTLI 1073
++VY M E + + Y ++
Sbjct: 402 LEVYGVMKEGSMKMEAACYAVIL 424
Score = 76.6 bits (187), Expect = 2e-11
Identities = 47/217 (21%), Positives = 106/217 (48%), Gaps = 1/217 (0%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
L + +SK L EA L + +P+ ++ +++ + +A+ ++ M+E G
Sbjct: 248 LIDAVCRSKNLREATRLLGVLGEAGYKPDCFLYNTIMKGYCLLDRGAEAITVYKKMREEG 307
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
+P+++T+N L+ S G+ D+ + L +M + +PD VTY ++ C G A
Sbjct: 308 C-EPDLVTYNTLIYGLSNAGKEDIAMKYLRVMVEEGHLPDTVTYTSLMNGMCRKGNATGA 366
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRV-KLQPDKFTYSILMEG 860
E+ EM + P+ +++ LL+ L K +D+ ++++ M+ ++ + Y++++
Sbjct: 367 LELLKEMEDRGCEPNSCTYSTLLQGLFKAGNLDKGLEVYGVMKEGSMKMEAACYAVILRA 426
Query: 861 LSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLIS 971
L + + A +++ S+ + D Y+ L S
Sbjct: 427 LCRG---ERVADAYEVFDYAVASKSLTDVAAYSALES 460
>gb|AAM62704.1| unknown [Arabidopsis thaliana]
Length = 463
Score = 151 bits (382), Expect = 4e-34
Identities = 89/259 (34%), Positives = 147/259 (56%), Gaps = 6/259 (2%)
Frame = +3
Query: 342 KSKTLSEAKDLYETIITTRRRP-NFNTHHVLLRKFAKNTMKEDALKLFL-FMKERGAFKP 515
KS LS+AK L+ +I T R P + H+ +L+ +A + +D +K F MK + F+P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYASIAVVDDTVKFFQHIMKSQPNFRP 120
Query: 516 NIITFNVLLADCSKTGE--LDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 689
TF +LL+ + + + V R+L LM ++ L PD+VT D+ VR+ C G + A +
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 690 IFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR--VKLQPDKFTYSILMEGL 863
+ E+T + PD ++N LL+ LCK + + D+MR ++PD +++IL++ +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 864 SNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCE 1043
NS K++ AM L K+ ++ D F+YNT++ GF + + V VY++M E+ E
Sbjct: 241 CNS---KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 1044 PDVVTYNTLIIHYSKVGNM 1100
PD +TYNTLI SK G +
Sbjct: 298 PDQITYNTLIFGLSKAGRV 316
Score = 92.4 bits (228), Expect = 3e-16
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 3/217 (1%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
L + SK L EA L + +P+ ++ +++ F + +A+ ++ MKE G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
+P+ IT+N L+ SK G ++ L+ M D PD TY ++ C GE A
Sbjct: 296 V-EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGA 354
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR---VKLQPDKFTYSILM 854
+ EM ++ P+ ++N LL LCK L+D+ M++++ M+ VKL+ + Y+ L+
Sbjct: 355 LSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESN--GYATLV 412
Query: 855 EGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTL 965
L S + A +++ DS+ ++D Y+TL
Sbjct: 413 RSLVKSGK---VAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 89.0 bits (219), Expect = 3e-15
Identities = 60/258 (23%), Positives = 119/258 (46%), Gaps = 1/258 (0%)
Frame = +3
Query: 330 QQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAF 509
+ L ++ + EAKDL + + P+ T++ LL+ K + M++
Sbjct: 167 RSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDV 226
Query: 510 KPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 689
KP++++F +L+ + + L ++ + + PD Y+ +++ FC+ + A
Sbjct: 227 KPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG 286
Query: 690 IFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRA-MDMFDKMRVKLQPDKFTYSILMEGLS 866
++ +M + + PD +++N L+ L K V+ A M + + +PD TY+ LM G+
Sbjct: 287 VYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Query: 867 NSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEP 1046
K A+ L ++M+ C + YNTL+ G K R +++YE M +
Sbjct: 347 R---KGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKL 403
Query: 1047 DVVTYNTLIIHYSKVGNM 1100
+ Y TL+ K G +
Sbjct: 404 ESNGYATLVRSLVKSGKV 421
>gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 464
Score = 150 bits (379), Expect = 9e-34
Identities = 87/263 (33%), Positives = 148/263 (56%), Gaps = 6/263 (2%)
Frame = +3
Query: 330 QQLLKSKTLSEAKDLYETIITTRRRP-NFNTHHVLLRKFAKNTMKEDALKLFLFM-KERG 503
+ L KS LS AK ++ +I+ T + P + H+ LL+ +A + D++ M K
Sbjct: 58 EPLFKSPDLSSAKKVFNSIVVTTKAPIDLRFHNTLLQSYASVSTVNDSISFLHHMVKAHP 117
Query: 504 AFKPNIITFNVLLADCSKTGE--LDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHE 677
+F P+ T+++LL+ K + L V + L LM + L P++VT D+ +R+ C AG +
Sbjct: 118 SFSPDRSTYHILLSQSCKAPDSSLSPVRQTLNLMVTNGLKPNQVTTDVAIRSLCEAGRID 177
Query: 678 RACEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVK--LQPDKFTYSIL 851
A E+ E++ + PD +FN L+++LCK + D M+ ++PD TY+IL
Sbjct: 178 HAVELVKELSLKHSPPDNFTFNFLVKNLCKCRTLSTVYGFIDDMKSSFGIKPDLVTYTIL 237
Query: 852 MEGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLE 1031
++ + NSK+ + AM L + +S D FVYNT++ G+ + + +++VY++M E
Sbjct: 238 IDNVCNSKN---LREAMRLVGVLNESGFKPDCFVYNTIMKGYCMLSKGSEIIEVYKKMKE 294
Query: 1032 QKCEPDVVTYNTLIIHYSKVGNM 1100
+ EPD+VTYNTLI SK G +
Sbjct: 295 EGVEPDLVTYNTLIFGLSKSGRV 317
Score = 88.2 bits (217), Expect = 5e-15
Identities = 51/215 (23%), Positives = 108/215 (50%), Gaps = 1/215 (0%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
L + SK L EA L + + +P+ ++ +++ + + + ++++ MKE G
Sbjct: 237 LIDNVCNSKNLREAMRLVGVLNESGFKPDCFVYNTIMKGYCMLSKGSEIIEVYKKMKEEG 296
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
+P+++T+N L+ SK+G + + L++M + PD VTY ++ C G A
Sbjct: 297 V-EPDLVTYNTLIFGLSKSGRVKEARKYLDIMVESGHFPDAVTYTSLMNGMCREGNALGA 355
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR-VKLQPDKFTYSILMEG 860
+ EM + P+ ++N LL LCK L+++ M+++ M+ + +K +Y+ L+
Sbjct: 356 VLLLEEMERKGCSPNSCTYNTLLHGLCKGRLMEKGMELYRAMKSAGMMLEKASYATLVRA 415
Query: 861 LSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTL 965
L + + A +++ +S+ + D Y+TL
Sbjct: 416 LCR---EGRVAEAYEVFDYAVESKSLTDVAAYSTL 447
Score = 85.9 bits (211), Expect = 3e-14
Identities = 58/251 (23%), Positives = 116/251 (46%), Gaps = 2/251 (0%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRR-RPNFNTHHVLLRKFAKNTMKEDALKLFLFMKER 500
L + L K +TLS + + ++ +P+ T+ +L+ + +A++L + E
Sbjct: 201 LVKNLCKCRTLSTVYGFIDDMKSSFGIKPDLVTYTILIDNVCNSKNLREAMRLVGVLNES 260
Query: 501 GAFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHER 680
G FKP+ +N ++ + + + + M + + PD VTY+ ++ +G +
Sbjct: 261 G-FKPDCFVYNTIMKGYCMLSKGSEIIEVYKKMKEEGVEPDLVTYNTLIFGLSKSGRVKE 319
Query: 681 ACEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVK-LQPDKFTYSILME 857
A + M PD V++ L+ +C+ A+ + ++M K P+ TY+ L+
Sbjct: 320 ARKYLDIMVESGHFPDAVTYTSLMNGMCREGNALGAVLLLEEMERKGCSPNSCTYNTLLH 379
Query: 858 GLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQK 1037
GL + M M+LY+ MK + + ++ Y TL+ + A +V++ +E K
Sbjct: 380 GLCKGRL---MEKGMELYRAMKSAGMMLEKASYATLVRALCREGRVAEAYEVFDYAVESK 436
Query: 1038 CEPDVVTYNTL 1070
DV Y+TL
Sbjct: 437 SLTDVAAYSTL 447
Score = 84.3 bits (207), Expect = 8e-14
Identities = 56/249 (22%), Positives = 111/249 (44%), Gaps = 1/249 (0%)
Frame = +3
Query: 330 QQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAF 509
+ L ++ + A +L + + P+ T + L++ K MK
Sbjct: 168 RSLCEAGRIDHAVELVKELSLKHSPPDNFTFNFLVKNLCKCRTLSTVYGFIDDMKSSFGI 227
Query: 510 KPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 689
KP+++T+ +L+ + + L R++ ++ + PD Y+ +++ +C + E
Sbjct: 228 KPDLVTYTILIDNVCNSKNLREAMRLVGVLNESGFKPDCFVYNTIMKGYCMLSKGSEIIE 287
Query: 690 IFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVKLQ-PDKFTYSILMEGLS 866
++ +M + + PDLV++N L+ L K+ V A D M PD TY+ LM G+
Sbjct: 288 VYKKMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKYLDIMVESGHFPDAVTYTSLMNGMC 347
Query: 867 NSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEP 1046
+ + A+ L ++M+ C + YNTL+ G K R +++Y M
Sbjct: 348 R---EGNALGAVLLLEEMERKGCSPNSCTYNTLLHGLCKGRLMEKGMELYRAMKSAGMML 404
Query: 1047 DVVTYNTLI 1073
+ +Y TL+
Sbjct: 405 EKASYATLV 413
>ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutrema salsugineum]
gi|557110430|gb|ESQ50721.1| hypothetical protein
EUTSA_v10022683mg [Eutrema salsugineum]
Length = 462
Score = 150 bits (378), Expect = 1e-33
Identities = 86/259 (33%), Positives = 147/259 (56%), Gaps = 6/259 (2%)
Frame = +3
Query: 342 KSKTLSEAKDLYETIITTRRRP-NFNTHHVLLRKFAKNTMKEDALKLFL-FMKERGAFKP 515
K+ LS+AK L+ +I T R P + H+ +L+ +A +D +KLFL +K + F P
Sbjct: 60 KTPDLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYASIAAVDDTVKLFLHILKSQPGFSP 119
Query: 516 NIITFNVLLADCSKTGE--LDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 689
TF++LL+ + + L V +L LM ++ + P++VT D+ VR+ C +G A +
Sbjct: 120 EHSTFHILLSHACRAPDSSLSNVHLVLNLMVNNGVAPNQVTTDIAVRSLCESGRISEAMD 179
Query: 690 IFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR--VKLQPDKFTYSILMEGL 863
+ E++ PD ++N LL+ LCK +D + D+M+ +++PD +Y+IL++ +
Sbjct: 180 LIKELSKNHSPPDTYTYNFLLKHLCKCGSLDVVYEFIDEMKETFEVKPDLVSYTILIDNV 239
Query: 864 SNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCE 1043
NS K++ AM L + D+ D F+YNT++ GF + + + VY++M E+ E
Sbjct: 240 CNS---KNLREAMRLVSALGDAGFKPDCFLYNTIMKGFCTLSKGSEAIIVYKKMKEEGVE 296
Query: 1044 PDVVTYNTLIIHYSKVGNM 1100
PD +TYNTLI SK G +
Sbjct: 297 PDRITYNTLIFGLSKSGRV 315
Score = 97.4 bits (241), Expect = 9e-18
Identities = 61/249 (24%), Positives = 116/249 (46%), Gaps = 1/249 (0%)
Frame = +3
Query: 330 QQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAF 509
+ L +S +SEA DL + + P+ T++ LL+ K + + MKE
Sbjct: 166 RSLCESGRISEAMDLIKELSKNHSPPDTYTYNFLLKHLCKCGSLDVVYEFIDEMKETFEV 225
Query: 510 KPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 689
KP+++++ +L+ + + L R++ + D PD Y+ +++ FC+ + A
Sbjct: 226 KPDLVSYTILIDNVCNSKNLREAMRLVSALGDAGFKPDCFLYNTIMKGFCTLSKGSEAII 285
Query: 690 IFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKM-RVKLQPDKFTYSILMEGLS 866
++ +M + + PD +++N L+ L K+ V+ A M +PD TY+ LM G+
Sbjct: 286 VYKKMKEEGVEPDRITYNTLIFGLSKSGRVEEARKYLQTMVEAGYEPDAVTYTSLMNGMC 345
Query: 867 NSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEP 1046
K A+ L ++M+ C + YNTL+ G K R +++Y M +
Sbjct: 346 R---KGASLGALSLLEEMEARGCAPNACTYNTLLYGLCKARLMDKGIELYGLMKSNGVKL 402
Query: 1047 DVVTYNTLI 1073
+ Y TL+
Sbjct: 403 ESSAYATLV 411
Score = 90.9 bits (224), Expect = 8e-16
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 3/217 (1%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
L + SK L EA L + +P+ ++ +++ F + +A+ ++ MKE G
Sbjct: 235 LIDNVCNSKNLREAMRLVSALGDAGFKPDCFLYNTIMKGFCTLSKGSEAIIVYKKMKEEG 294
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
+P+ IT+N L+ SK+G ++ + L+ M + PD VTY ++ C G A
Sbjct: 295 V-EPDRITYNTLIFGLSKSGRVEEARKYLQTMVEAGYEPDAVTYTSLMNGMCRKGASLGA 353
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR---VKLQPDKFTYSILM 854
+ EM ++ P+ ++N LL LCK L+D+ ++++ M+ VKL+ Y+ L+
Sbjct: 354 LSLLEEMEARGCAPNACTYNTLLYGLCKARLMDKGIELYGLMKSNGVKLESS--AYATLV 411
Query: 855 EGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTL 965
GL S + A +++ DS+ + D Y TL
Sbjct: 412 RGLVRSGK---VAEAYEVFDYAVDSKSLTDVSAYTTL 445
>ref|NP_973481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251569|gb|AEC06663.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 349
Score = 149 bits (377), Expect = 1e-33
Identities = 88/259 (33%), Positives = 146/259 (56%), Gaps = 6/259 (2%)
Frame = +3
Query: 342 KSKTLSEAKDLYETIITTRRRP-NFNTHHVLLRKFAKNTMKEDALKLFL-FMKERGAFKP 515
KS LS+AK L+ +I T R P + H+ +L+ + + D +KLF +K + F+P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 516 NIITFNVLLADCSKTGE--LDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 689
TF +LL+ + + + V R+L LM ++ L PD+VT D+ VR+ C G + A +
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 690 IFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR--VKLQPDKFTYSILMEGL 863
+ E+T + PD ++N LL+ LCK + + D+MR ++PD +++IL++ +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 864 SNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCE 1043
NS K++ AM L K+ ++ D F+YNT++ GF + + V VY++M E+ E
Sbjct: 241 CNS---KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 1044 PDVVTYNTLIIHYSKVGNM 1100
PD +TYNTLI SK G +
Sbjct: 298 PDQITYNTLIFGLSKAGRV 316
Score = 66.6 bits (161), Expect = 2e-08
Identities = 40/179 (22%), Positives = 86/179 (48%), Gaps = 1/179 (0%)
Frame = +3
Query: 330 QQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAF 509
+ L ++ + EAKDL + + P+ T++ LL+ K + M++
Sbjct: 167 RSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDV 226
Query: 510 KPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 689
KP++++F +L+ + + L ++ + + PD Y+ +++ FC+ + A
Sbjct: 227 KPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG 286
Query: 690 IFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRA-MDMFDKMRVKLQPDKFTYSILMEGL 863
++ +M + + PD +++N L+ L K V+ A M + + +PD TY+ LM G+
Sbjct: 287 VYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
>ref|NP_565422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146596|sp|Q84J71.1|PP161_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g17670 gi|28393395|gb|AAO42121.1| unknown protein
[Arabidopsis thaliana] gi|28973597|gb|AAO64123.1| unknown
protein [Arabidopsis thaliana]
gi|330251570|gb|AEC06664.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 463
Score = 149 bits (377), Expect = 1e-33
Identities = 88/259 (33%), Positives = 146/259 (56%), Gaps = 6/259 (2%)
Frame = +3
Query: 342 KSKTLSEAKDLYETIITTRRRP-NFNTHHVLLRKFAKNTMKEDALKLFL-FMKERGAFKP 515
KS LS+AK L+ +I T R P + H+ +L+ + + D +KLF +K + F+P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 516 NIITFNVLLADCSKTGE--LDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 689
TF +LL+ + + + V R+L LM ++ L PD+VT D+ VR+ C G + A +
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 690 IFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR--VKLQPDKFTYSILMEGL 863
+ E+T + PD ++N LL+ LCK + + D+MR ++PD +++IL++ +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 864 SNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCE 1043
NS K++ AM L K+ ++ D F+YNT++ GF + + V VY++M E+ E
Sbjct: 241 CNS---KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 1044 PDVVTYNTLIIHYSKVGNM 1100
PD +TYNTLI SK G +
Sbjct: 298 PDQITYNTLIFGLSKAGRV 316
Score = 92.4 bits (228), Expect = 3e-16
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 3/217 (1%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
L + SK L EA L + +P+ ++ +++ F + +A+ ++ MKE G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
+P+ IT+N L+ SK G ++ L+ M D PD TY ++ C GE A
Sbjct: 296 V-EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGA 354
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR---VKLQPDKFTYSILM 854
+ EM ++ P+ ++N LL LCK L+D+ M++++ M+ VKL+ + Y+ L+
Sbjct: 355 LSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESN--GYATLV 412
Query: 855 EGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTL 965
L S + A +++ DS+ ++D Y+TL
Sbjct: 413 RSLVKSGK---VAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 89.0 bits (219), Expect = 3e-15
Identities = 60/258 (23%), Positives = 119/258 (46%), Gaps = 1/258 (0%)
Frame = +3
Query: 330 QQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAF 509
+ L ++ + EAKDL + + P+ T++ LL+ K + M++
Sbjct: 167 RSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDV 226
Query: 510 KPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 689
KP++++F +L+ + + L ++ + + PD Y+ +++ FC+ + A
Sbjct: 227 KPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG 286
Query: 690 IFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRA-MDMFDKMRVKLQPDKFTYSILMEGLS 866
++ +M + + PD +++N L+ L K V+ A M + + +PD TY+ LM G+
Sbjct: 287 VYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Query: 867 NSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEP 1046
K A+ L ++M+ C + YNTL+ G K R +++YE M +
Sbjct: 347 R---KGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKL 403
Query: 1047 DVVTYNTLIIHYSKVGNM 1100
+ Y TL+ K G +
Sbjct: 404 ESNGYATLVRSLVKSGKV 421
>ref|XP_002884075.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297329915|gb|EFH60334.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 462
Score = 149 bits (377), Expect = 1e-33
Identities = 88/259 (33%), Positives = 147/259 (56%), Gaps = 6/259 (2%)
Frame = +3
Query: 342 KSKTLSEAKDLYETIITTRRRP-NFNTHHVLLRKFAKNTMKEDALKLFL-FMKERGAFKP 515
KS LS+AK L+ +I T R P + H+ +L+ +A +D +KLF +K + F+P
Sbjct: 60 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYASIAAVDDTVKLFQHILKSQPNFRP 119
Query: 516 NIITFNVLLADCSKTGE--LDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 689
TF +LL+ + + + V R+L LM ++ L PD+VT D+ VR+ C G + A +
Sbjct: 120 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 179
Query: 690 IFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR--VKLQPDKFTYSILMEGL 863
+ E+T + PD ++N LL+ LCK + + D+MR ++PD +++IL++ +
Sbjct: 180 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 239
Query: 864 SNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCE 1043
NS K++ AM L K+ ++ D F+YNT++ GF + + + VY++M E+ E
Sbjct: 240 CNS---KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAIGVYKKMKEEGVE 296
Query: 1044 PDVVTYNTLIIHYSKVGNM 1100
PD +TYNTLI SK G +
Sbjct: 297 PDQITYNTLIYGLSKSGRV 315
Score = 92.4 bits (228), Expect = 3e-16
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 3/217 (1%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
L + SK L EA L + +P+ ++ +++ F + +A+ ++ MKE G
Sbjct: 235 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAIGVYKKMKEEG 294
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
+P+ IT+N L+ SK+G ++ L+ M D PD TY ++ C GE A
Sbjct: 295 V-EPDQITYNTLIYGLSKSGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGA 353
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR---VKLQPDKFTYSILM 854
+ EM ++ P+ ++N LL LCK L+D+ M++++ M+ VKL+ + Y+ L+
Sbjct: 354 LSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYELMKSSGVKLETN--GYATLV 411
Query: 855 EGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTL 965
L S + A +++ DS+ + D Y+TL
Sbjct: 412 RSLVKSGK---VAEAYEVFDYAVDSKSLTDASAYSTL 445
Score = 90.9 bits (224), Expect = 8e-16
Identities = 60/258 (23%), Positives = 120/258 (46%), Gaps = 1/258 (0%)
Frame = +3
Query: 330 QQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAF 509
+ L ++ + EAKDL + + P+ T++ LL+ K + M++
Sbjct: 166 RSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDV 225
Query: 510 KPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 689
KP++++F +L+ + + L ++ + + PD Y+ +++ FC+ + A
Sbjct: 226 KPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAIG 285
Query: 690 IFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRA-MDMFDKMRVKLQPDKFTYSILMEGLS 866
++ +M + + PD +++N L+ L K+ V+ A M + + +PD TY+ LM G+
Sbjct: 286 VYKKMKEEGVEPDQITYNTLIYGLSKSGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 345
Query: 867 NSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEP 1046
K A+ L ++M+ C + YNTL+ G K R +++YE M +
Sbjct: 346 R---KGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYELMKSSGVKL 402
Query: 1047 DVVTYNTLIIHYSKVGNM 1100
+ Y TL+ K G +
Sbjct: 403 ETNGYATLVRSLVKSGKV 420
>ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
isoform X1 [Cicer arietinum]
gi|502155526|ref|XP_004510106.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X2 [Cicer arietinum]
Length = 468
Score = 149 bits (376), Expect = 2e-33
Identities = 86/261 (32%), Positives = 143/261 (54%), Gaps = 6/261 (2%)
Frame = +3
Query: 336 LLKSKTLSEAKDLYETIITTRRRPN-FNTHHVLLRKFAKNTMKEDALKLFLFM-KERGAF 509
L KS L EAK ++ +I+ + PN F H+ LL+ +A + D++ M K +F
Sbjct: 60 LFKSPCLQEAKSIFNSIVKSSNVPNDFRFHNSLLQSYASVSTINDSIAFLRHMTKTHPSF 119
Query: 510 KPNIITFNVLLADCSKTGE--LDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
P+ T+++LL K+ + L + + L LM + PD+VT DL VR+ CSAG + A
Sbjct: 120 TPDKSTYHILLTQSCKSTDTTLSQIHQTLNLMVSDGVSPDKVTVDLAVRSLCSAGRMDEA 179
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVK--LQPDKFTYSILME 857
E+ E++S+ PD+ +FN L++ LCK + +MR K ++PD T++IL++
Sbjct: 180 VELIKELSSKHCSPDIYTFNFLVKHLCKCLTLSTLYSFIIEMRSKFGVKPDLVTFTILID 239
Query: 858 GLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQK 1037
+ N+ K++ + L + + D + YNT++ G+ KM ++VY +M E
Sbjct: 240 NVCNA---KNLRETLSLMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNEAIEVYNKMKEAG 296
Query: 1038 CEPDVVTYNTLIIHYSKVGNM 1100
EPD++TYNTLI SK G +
Sbjct: 297 VEPDLITYNTLIYGLSKSGRV 317
Score = 97.4 bits (241), Expect = 9e-18
Identities = 60/258 (23%), Positives = 119/258 (46%), Gaps = 1/258 (0%)
Frame = +3
Query: 330 QQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAF 509
+ L + + EA +L + + + P+ T + L++ K + M+ +
Sbjct: 168 RSLCSAGRMDEAVELIKELSSKHCSPDIYTFNFLVKHLCKCLTLSTLYSFIIEMRSKFGV 227
Query: 510 KPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 689
KP+++TF +L+ + L ++ ++ + D Y+ +++ +C G A E
Sbjct: 228 KPDLVTFTILIDNVCNAKNLRETLSLMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNEAIE 287
Query: 690 IFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVKLQ-PDKFTYSILMEGLS 866
++ +M + PDL+++N L+ L K+ V A + M K PD+ TY+ LM GL
Sbjct: 288 VYNKMKEAGVEPDLITYNTLIYGLSKSGRVMEAKKLLRVMAEKGHFPDEVTYTSLMNGLC 347
Query: 867 NSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEP 1046
K + SA+ L ++M+ C + YNTL+ G K R +++Y EM +
Sbjct: 348 R---KGEILSAIALLEEMEAIGCSPNSCTYNTLLHGLCKSRLFDKAMELYGEMKSGCLKL 404
Query: 1047 DVVTYNTLIIHYSKVGNM 1100
++ +Y T + + G +
Sbjct: 405 EMASYATFVRALCRAGRI 422
Score = 88.2 bits (217), Expect = 5e-15
Identities = 54/217 (24%), Positives = 110/217 (50%), Gaps = 1/217 (0%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
L + +K L E L + + + ++ +++ + K +A++++ MKE G
Sbjct: 237 LIDNVCNAKNLRETLSLMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNEAIEVYNKMKEAG 296
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
+P++IT+N L+ SK+G + +++L +M + PD VTY ++ C GE A
Sbjct: 297 V-EPDLITYNTLIYGLSKSGRVMEAKKLLRVMAEKGHFPDEVTYTSLMNGLCRKGEILSA 355
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVK-LQPDKFTYSILMEG 860
+ EM + P+ ++N LL LCK+ L D+AM+++ +M+ L+ + +Y+ +
Sbjct: 356 IALLEEMEAIGCSPNSCTYNTLLHGLCKSRLFDKAMELYGEMKSGCLKLEMASYATFVRA 415
Query: 861 LSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLIS 971
L + + A +++ +S+ + D Y+TL S
Sbjct: 416 LCRA---GRIADAYEVFDYAVESKSLTDVAAYSTLES 449
>ref|XP_004232547.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
[Solanum lycopersicum]
Length = 469
Score = 149 bits (376), Expect = 2e-33
Identities = 84/259 (32%), Positives = 152/259 (58%), Gaps = 7/259 (2%)
Frame = +3
Query: 345 SKTLSEAKDLYETIITTRRRPNFNT--HHVLLRKFAKNTMKEDALKLFLFM-KERGAFKP 515
S +LS+AK L+ ++I++ R P+ + ++ +L+ F+ N+ +D++ M K F P
Sbjct: 67 STSLSDAKTLFNSLISSTRNPSTDNKFYNAVLQSFSSNSTLQDSIFFLNHMIKVHPPFSP 126
Query: 516 NIITFNVLLADCSKTGELDM--VERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 689
+ T++VLL K+ +L + V ++L LMT + P++V+ D+ VR CS+G E+A E
Sbjct: 127 DRFTYHVLLVQSCKSVDLSLSPVHQVLNLMTTNGFPPNKVSTDIAVRTLCSSGHEEQAIE 186
Query: 690 IFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR--VKLQPDKFTYSILMEGL 863
+ E++S++ PD ++N ++R LCKN + + +MR ++PD TY+I+++ +
Sbjct: 187 LVKELSSKDSPPDTYTYNFIIRHLCKNRPLSTMNNFIKEMREGFDIKPDLVTYTIMIDNV 246
Query: 864 SNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCE 1043
NS K++ A L + + D +VYNT++ G+ + V+ VY++M E+ +
Sbjct: 247 CNS---KNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGEVLGVYKKMQEEGVK 303
Query: 1044 PDVVTYNTLIIHYSKVGNM 1100
PD+VTYNTLI SK G +
Sbjct: 304 PDLVTYNTLIYGLSKSGRV 322
Score = 88.6 bits (218), Expect = 4e-15
Identities = 54/239 (22%), Positives = 111/239 (46%), Gaps = 1/239 (0%)
Frame = +3
Query: 360 EAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFNVL 539
+A +L + + + P+ T++ ++R KN M+E KP+++T+ ++
Sbjct: 183 QAIELVKELSSKDSPPDTYTYNFIIRHLCKNRPLSTMNNFIKEMREGFDIKPDLVTYTIM 242
Query: 540 LADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQEI 719
+ + + L R+L ++++ PD Y+ +++ +C + ++ +M + +
Sbjct: 243 IDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGEVLGVYKKMQEEGV 302
Query: 720 GPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVKLQ-PDKFTYSILMEGLSNSKSKKHMNS 896
PDLV++N L+ L K+ V A + M + PD TY+ LM G+
Sbjct: 303 KPDLVTYNTLIYGLSKSGRVKDAKKFLNVMMEEGHVPDAVTYTSLMNGMCREADPL---G 359
Query: 897 AMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEPDVVTYNTLI 1073
A+ L +KM+ C + YNTL+ G K R + +Y+ M + + + +Y T +
Sbjct: 360 AVALLEKMEARGCAPNSCTYNTLLHGLCKGRLLDKGMKLYDVMKQNGTKLETGSYGTFL 418
Score = 83.6 bits (205), Expect = 1e-13
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 3/219 (1%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
+ + SK L EA L + +P+ ++ +++ + + + L ++ M+E G
Sbjct: 242 MIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGEVLGVYKKMQEEG 301
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
KP+++T+N L+ SK+G + ++ L +M + +PD VTY ++ C + A
Sbjct: 302 V-KPDLVTYNTLIYGLSKSGRVKDAKKFLNVMMEEGHVPDAVTYTSLMNGMCREADPLGA 360
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR---VKLQPDKFTYSILM 854
+ +M ++ P+ ++N LL LCK L+D+ M ++D M+ KL+ +Y +
Sbjct: 361 VALLEKMEARGCAPNSCTYNTLLHGLCKGRLLDKGMKLYDVMKQNGTKLETG--SYGTFL 418
Query: 855 EGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLIS 971
L + + A +++ +S+ + D Y TL S
Sbjct: 419 RALCRN---GRVADAYEVFDYAIESKSLTDVAAYTTLES 454
>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
Length = 472
Score = 149 bits (376), Expect = 2e-33
Identities = 85/261 (32%), Positives = 145/261 (55%), Gaps = 6/261 (2%)
Frame = +3
Query: 336 LLKSKTLSEAKDLYETIITTRRRP-NFNTHHVLLRKFAKNTMKEDALKLFLFM-KERGAF 509
+ S L +AK L+ +I TT P + H+ LL+ ++ + D++ M K + +F
Sbjct: 68 IFNSPNLLDAKKLFASITTTSTTPLDLRFHNALLQSYSSISTVNDSISFLRHMIKSQPSF 127
Query: 510 KPNIITFNVLLADCSKT--GELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
P T+++LL+ K+ +L V + L LM H PDRVT D+ VR+ CSAG E A
Sbjct: 128 SPERSTYHILLSQSCKSPNSDLSAVHQTLNLMVTHGFPPDRVTTDIAVRSLCSAGREEHA 187
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR--VKLQPDKFTYSILME 857
E+ E++ + PD ++N ++R LCK + + D+++ +L+PD TY+IL++
Sbjct: 188 IELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSFQLKPDLVTYTILID 247
Query: 858 GLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQK 1037
+ N K++ A L + + ++ D +VYNT++ G+ + + + VY++M E+
Sbjct: 248 NVCNG---KNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKMKEEG 304
Query: 1038 CEPDVVTYNTLIIHYSKVGNM 1100
EPD+VTYNTLI SK G +
Sbjct: 305 VEPDLVTYNTLIFGLSKSGRV 325
Score = 88.2 bits (217), Expect = 5e-15
Identities = 57/247 (23%), Positives = 112/247 (45%), Gaps = 1/247 (0%)
Frame = +3
Query: 363 AKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFNVLL 542
A +L + + P+ T++ ++R K ++ KP+++T+ +L+
Sbjct: 187 AIELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSFQLKPDLVTYTILI 246
Query: 543 ADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQEIG 722
+ L R+LE++ + PD Y+ +++ +C + A ++ +M + +
Sbjct: 247 DNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKMKEEGVE 306
Query: 723 PDLVSFNILLRSLCKNNLVDRAMDMFDKM-RVKLQPDKFTYSILMEGLSNSKSKKHMNSA 899
PDLV++N L+ L K+ V A D M + PD TY+ LM GL + + A
Sbjct: 307 PDLVTYNTLIFGLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGLCR---EGNALGA 363
Query: 900 MDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEPDVVTYNTLIIH 1079
+ L ++M+ C + YNTL+ G K+R +++Y M + + +Y T +
Sbjct: 364 LALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYATFVRA 423
Query: 1080 YSKVGNM 1100
K G +
Sbjct: 424 LCKEGRV 430
Score = 84.3 bits (207), Expect = 8e-14
Identities = 51/223 (22%), Positives = 109/223 (48%), Gaps = 1/223 (0%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
L + K L EA L E + +P+ ++ +++ + +A+ ++ MKE G
Sbjct: 245 LIDNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKMKEEG 304
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
+P+++T+N L+ SK+G + + L++M + PD VTY ++ C G A
Sbjct: 305 V-EPDLVTYNTLIFGLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGLCREGNALGA 363
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRV-KLQPDKFTYSILMEG 860
+ EM ++ P+ ++N LL LCK +++R ++++ M+ ++ +K +Y+ +
Sbjct: 364 LALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYATFVRA 423
Query: 861 LSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMR 989
L + + A + + + +S+ D Y+TL + +R
Sbjct: 424 LC---KEGRVAEAYEAFDYVVESKSFDDVTAYSTLENSLKWLR 463
>ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520709|gb|AET01163.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 501
Score = 147 bits (372), Expect = 6e-33
Identities = 81/264 (30%), Positives = 146/264 (55%), Gaps = 9/264 (3%)
Frame = +3
Query: 336 LLKSKTLSEAKDLYETIITTRRRP-NFNTHHVLLRKFAKNTMKEDALKLFLFM-KERGAF 509
+ KS L EAK ++ + + + P + H+ LL+ +A + D++ M K +F
Sbjct: 60 VFKSPNLQEAKSIFNSFVNSSNAPIDSRFHNSLLQSYASISTINDSIAFLRHMTKTHPSF 119
Query: 510 KPNIITFNVLLADC-----SKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEH 674
P+ T+++LL C SK L ++ + L LM + PD+ T DL VR+ C+A
Sbjct: 120 SPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRSLCTADRV 179
Query: 675 ERACEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVK--LQPDKFTYSI 848
+ A E+ E++S+ PD+ S+N L+++LCK+ + D+MR K ++P+ TY+I
Sbjct: 180 DDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTYTI 239
Query: 849 LMEGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEML 1028
L++ + N+K+ + +D+ +++ D F+YNT++ G+ + + ++VY M
Sbjct: 240 LIDNVCNTKNLREATRLVDI---LEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMK 296
Query: 1029 EQKCEPDVVTYNTLIIHYSKVGNM 1100
E+ EPD++TYNTLI SK G +
Sbjct: 297 EKGVEPDLITYNTLIFGLSKSGRV 320
Score = 100 bits (249), Expect = 1e-18
Identities = 59/258 (22%), Positives = 121/258 (46%), Gaps = 1/258 (0%)
Frame = +3
Query: 330 QQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAF 509
+ L + + +A +L + + + P+ +++ L++ K+ M+ +
Sbjct: 171 RSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDV 230
Query: 510 KPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 689
KPN++T+ +L+ + T L R+++++ + PD Y+ +++ +C A E
Sbjct: 231 KPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIE 290
Query: 690 IFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVKLQ-PDKFTYSILMEGLS 866
++ M + + PDL+++N L+ L K+ V A + M K PD+ TY+ LM G+
Sbjct: 291 VYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMC 350
Query: 867 NSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEP 1046
K +A+ L ++M+ C + YNTL+ G K R +++Y M +
Sbjct: 351 R---KGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKL 407
Query: 1047 DVVTYNTLIIHYSKVGNM 1100
D+ +Y T + VG +
Sbjct: 408 DMASYATFVRALCSVGRV 425
Score = 96.3 bits (238), Expect = 2e-17
Identities = 56/217 (25%), Positives = 114/217 (52%), Gaps = 1/217 (0%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
L + +K L EA L + + +P+ ++ +++ + + +A++++ MKE+G
Sbjct: 240 LIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKG 299
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
+P++IT+N L+ SK+G + +++L +M + PD VTY ++ C GE A
Sbjct: 300 V-EPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAA 358
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVK-LQPDKFTYSILMEG 860
+ EM + P+ ++N LL LCK+ + D+AM+++ M+ L+ D +Y+ +
Sbjct: 359 LALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRA 418
Query: 861 LSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLIS 971
L S + A +++ +S+ ++D Y+TL S
Sbjct: 419 LC---SVGRVADAYEVFDYAVESKSLSDVAAYSTLES 452
>ref|XP_006340813.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
[Solanum tuberosum]
Length = 467
Score = 147 bits (371), Expect = 7e-33
Identities = 85/260 (32%), Positives = 152/260 (58%), Gaps = 8/260 (3%)
Frame = +3
Query: 345 SKTLSEAKDLYETIITTRRRPNFNT--HHVLLRKFAKNTMKEDALKLFL--FMKERGAFK 512
S +LS+AK L+ ++I+ R P + ++ +L+ F+ N+ +D++ FL +K F
Sbjct: 65 STSLSDAKTLFNSLISNSRNPTSDNKFYNAVLQSFSSNSTLQDSI-FFLNHVIKVHPPFS 123
Query: 513 PNIITFNVLLADCSKTGELDM--VERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERAC 686
P+ T++VLL K+ +L + V ++L LMT + P++V+ D+ VR CS+G E+A
Sbjct: 124 PDRFTYHVLLIQSCKSVDLSLSPVHQVLNLMTTNGFPPNKVSTDIAVRTLCSSGHEEQAI 183
Query: 687 EIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR--VKLQPDKFTYSILMEG 860
E+ E++S++ PD ++N ++R LCKN + + +MR ++PD TY+I+++
Sbjct: 184 ELVKELSSKDSPPDTYTYNFIVRHLCKNRPLSTMNNFIKEMREGFDIKPDLVTYTIMIDN 243
Query: 861 LSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKC 1040
+ NS K++ A L + + D +VYNT++ G+ + V+ VY++M E+
Sbjct: 244 VCNS---KNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGEVLGVYKKMQEEGV 300
Query: 1041 EPDVVTYNTLIIHYSKVGNM 1100
+PD+VTYNTLI SK G +
Sbjct: 301 KPDLVTYNTLIYGLSKSGRV 320
Score = 89.0 bits (219), Expect = 3e-15
Identities = 54/239 (22%), Positives = 111/239 (46%), Gaps = 1/239 (0%)
Frame = +3
Query: 360 EAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFNVL 539
+A +L + + + P+ T++ ++R KN M+E KP+++T+ ++
Sbjct: 181 QAIELVKELSSKDSPPDTYTYNFIVRHLCKNRPLSTMNNFIKEMREGFDIKPDLVTYTIM 240
Query: 540 LADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQEI 719
+ + + L R+L ++++ PD Y+ +++ +C + ++ +M + +
Sbjct: 241 IDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGEVLGVYKKMQEEGV 300
Query: 720 GPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVKLQ-PDKFTYSILMEGLSNSKSKKHMNS 896
PDLV++N L+ L K+ V A + M + PD TY+ LM G+
Sbjct: 301 KPDLVTYNTLIYGLSKSGRVKDAKKFLNVMMEEGHVPDAVTYTSLMNGMCREADPL---G 357
Query: 897 AMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEPDVVTYNTLI 1073
A+ L +KM+ C + YNTL+ G K R + +Y+ M + + + +Y T +
Sbjct: 358 AVALLEKMEARGCAPNSCTYNTLLHGLCKGRLLDKGMKLYDVMKQNSTKLETGSYGTFL 416
Score = 85.1 bits (209), Expect = 4e-14
Identities = 53/219 (24%), Positives = 106/219 (48%), Gaps = 3/219 (1%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
+ + SK L EA L + +P+ ++ +++ + + + L ++ M+E G
Sbjct: 240 MIDNVCNSKNLREATRLLGVLSEEGYKPDCYVYNTIMKGYCMLSQGGEVLGVYKKMQEEG 299
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
KP+++T+N L+ SK+G + ++ L +M + +PD VTY ++ C + A
Sbjct: 300 V-KPDLVTYNTLIYGLSKSGRVKDAKKFLNVMMEEGHVPDAVTYTSLMNGMCREADPLGA 358
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR---VKLQPDKFTYSILM 854
+ +M ++ P+ ++N LL LCK L+D+ M ++D M+ KL+ +Y +
Sbjct: 359 VALLEKMEARGCAPNSCTYNTLLHGLCKGRLLDKGMKLYDVMKQNSTKLETG--SYGTFL 416
Query: 855 EGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLIS 971
L + + A D++ +S+ + D Y TL S
Sbjct: 417 RALCRN---GRVAEAYDVFDYAIESKSLTDVAAYTTLES 452
>ref|XP_004163411.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
[Cucumis sativus]
Length = 464
Score = 144 bits (363), Expect = 6e-32
Identities = 89/269 (33%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Frame = +3
Query: 312 PECELTQQLLKSKTLSEAKDLYETIITTRRRP-NFNTHHVLLRKFAKNTMKEDALKLFLF 488
PE + KS +L++AK LY + I+ + P N H+ LL+ +A D++
Sbjct: 52 PEKPKLPTVFKSASLADAKKLYSSFISATKAPFNLRVHNSLLQSYASIATLNDSISFLRH 111
Query: 489 M-KERGAFKPNIITFNVLLADCSKTGE--LDMVERILELMTDHDLMPDRVTYDLMVRAFC 659
M K + +F P+ TF++LL+ + L V++IL M + PD+VT DL VR+ C
Sbjct: 112 MSKVQPSFSPDQSTFHILLSTSGNRPDSTLASVQQILNFMVTNGFNPDKVTADLAVRSLC 171
Query: 660 SAGEHERACEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVK--LQPDK 833
S G + A E+ E++ + PD+ ++N L++ LCK+ + + +MR +PD
Sbjct: 172 SVGLVDEAVELVKELSQKHTPPDIYTYNHLVKQLCKSRALSTVYNFIVEMRSSCGAKPDL 231
Query: 834 FTYSILMEGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDV 1013
TY+IL++ + NS ++ AM L + D FVYNT++ G+ + A + V
Sbjct: 232 VTYTILIDNVCNS---NNLREAMRLVSLLYKEGFKPDCFVYNTIMKGYCMVGRGAEAIGV 288
Query: 1014 YEEMLEQKCEPDVVTYNTLIIHYSKVGNM 1100
Y++M E EPDVVT+NTLI SK G +
Sbjct: 289 YKKMKEVGLEPDVVTFNTLIFGLSKSGRV 317
Score = 94.0 bits (232), Expect = 1e-16
Identities = 56/241 (23%), Positives = 114/241 (47%), Gaps = 1/241 (0%)
Frame = +3
Query: 354 LSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFN 533
+ EA +L + + P+ T++ L+++ K+ + M+ KP+++T+
Sbjct: 176 VDEAVELVKELSQKHTPPDIYTYNHLVKQLCKSRALSTVYNFIVEMRSSCGAKPDLVTYT 235
Query: 534 VLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQ 713
+L+ + + L R++ L+ PD Y+ +++ +C G A ++ +M
Sbjct: 236 ILIDNVCNSNNLREAMRLVSLLYKEGFKPDCFVYNTIMKGYCMVGRGAEAIGVYKKMKEV 295
Query: 714 EIGPDLVSFNILLRSLCKNNLVDRAMDMFDKM-RVKLQPDKFTYSILMEGLSNSKSKKHM 890
+ PD+V+FN L+ L K+ V A + D M + PD TY+ LM G+ + +
Sbjct: 296 GLEPDVVTFNTLIFGLSKSGRVKEARNFLDIMAEMGHFPDAVTYTSLMNGMCR---EGNA 352
Query: 891 NSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEPDVVTYNTL 1070
A+ L ++M+ C + YNTL+ G +K R +++Y M + + +Y+T
Sbjct: 353 LGALSLLKEMEAKGCNPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSCDMKLETASYSTF 412
Query: 1071 I 1073
+
Sbjct: 413 V 413
Score = 80.5 bits (197), Expect = 1e-12
Identities = 59/254 (23%), Positives = 112/254 (44%), Gaps = 5/254 (1%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRR----RPNFNTHHVLLRKFAKNTMKEDALKLFLFM 491
L +QL KS+ LS +Y I+ R +P+ T+ +L+ + +A++L +
Sbjct: 201 LVKQLCKSRALST---VYNFIVEMRSSCGAKPDLVTYTILIDNVCNSNNLREAMRLVSLL 257
Query: 492 KERGAFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGE 671
+ G FKP+ +N ++ G + + M + L PD VT++ ++ +G
Sbjct: 258 YKEG-FKPDCFVYNTIMKGYCMVGRGAEAIGVYKKMKEVGLEPDVVTFNTLIFGLSKSGR 316
Query: 672 HERACEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVK-LQPDKFTYSI 848
+ A M PD V++ L+ +C+ A+ + +M K P+ TY+
Sbjct: 317 VKEARNFLDIMAEMGHFPDAVTYTSLMNGMCREGNALGALSLLKEMEAKGCNPNSCTYNT 376
Query: 849 LMEGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEML 1028
L+ GLS S+ ++ ++LY MK + Y+T + + A + ++ +
Sbjct: 377 LLHGLSKSRL---LDRGIELYGLMKSCDMKLETASYSTFVRALCRSGRIAEAYEAFDYAV 433
Query: 1029 EQKCEPDVVTYNTL 1070
E K DV Y +L
Sbjct: 434 ESKSLTDVSAYLSL 447
>ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
[Cucumis sativus]
Length = 464
Score = 144 bits (362), Expect = 8e-32
Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Frame = +3
Query: 312 PECELTQQLLKSKTLSEAKDLYETIITTRRRP-NFNTHHVLLRKFAKNTMKEDALKLFLF 488
PE + KS +L++AK LY + ++ + P N H+ LL+ +A D++
Sbjct: 52 PEKPKLPTVFKSASLADAKKLYSSFVSATKAPFNLRVHNSLLQSYASIATLNDSISFLRH 111
Query: 489 M-KERGAFKPNIITFNVLLADCSKTGE--LDMVERILELMTDHDLMPDRVTYDLMVRAFC 659
M K + +F P+ TF++LL+ + L V++IL M + PD+VT DL VR+ C
Sbjct: 112 MSKVQPSFSPDQSTFHILLSTSGNRPDSTLASVQQILNFMVTNGFNPDKVTADLAVRSLC 171
Query: 660 SAGEHERACEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVK--LQPDK 833
S G + A E+ E++ + PD+ ++N L++ LCK+ + + +MR +PD
Sbjct: 172 SVGLVDEAVELVKELSQKHTPPDIYTYNHLVKQLCKSRALSTVYNFIVEMRSSCGAKPDL 231
Query: 834 FTYSILMEGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDV 1013
TY+IL++ + NS ++ AM L + D FVYNT++ G+ + A + V
Sbjct: 232 VTYTILIDNVCNS---NNLREAMRLVSLLYKEGFKPDCFVYNTIMKGYCMVGRGAEAIGV 288
Query: 1014 YEEMLEQKCEPDVVTYNTLIIHYSKVGNM 1100
Y++M E EPDVVT+NTLI SK G +
Sbjct: 289 YKKMKEVGLEPDVVTFNTLIFGLSKSGRV 317
Score = 94.0 bits (232), Expect = 1e-16
Identities = 56/241 (23%), Positives = 114/241 (47%), Gaps = 1/241 (0%)
Frame = +3
Query: 354 LSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFN 533
+ EA +L + + P+ T++ L+++ K+ + M+ KP+++T+
Sbjct: 176 VDEAVELVKELSQKHTPPDIYTYNHLVKQLCKSRALSTVYNFIVEMRSSCGAKPDLVTYT 235
Query: 534 VLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQ 713
+L+ + + L R++ L+ PD Y+ +++ +C G A ++ +M
Sbjct: 236 ILIDNVCNSNNLREAMRLVSLLYKEGFKPDCFVYNTIMKGYCMVGRGAEAIGVYKKMKEV 295
Query: 714 EIGPDLVSFNILLRSLCKNNLVDRAMDMFDKM-RVKLQPDKFTYSILMEGLSNSKSKKHM 890
+ PD+V+FN L+ L K+ V A + D M + PD TY+ LM G+ + +
Sbjct: 296 GLEPDVVTFNTLIFGLSKSGRVKEARNFLDIMAEMGHFPDAVTYTSLMNGMCR---EGNA 352
Query: 891 NSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEPDVVTYNTL 1070
A+ L ++M+ C + YNTL+ G +K R +++Y M + + +Y+T
Sbjct: 353 LGALSLLKEMEAKGCNPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSCDMKLETASYSTF 412
Query: 1071 I 1073
+
Sbjct: 413 V 413
Score = 82.0 bits (201), Expect = 4e-13
Identities = 60/254 (23%), Positives = 113/254 (44%), Gaps = 5/254 (1%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRR----RPNFNTHHVLLRKFAKNTMKEDALKLFLFM 491
L +QL KS+ LS +Y I+ R +P+ T+ +L+ + +A++L +
Sbjct: 201 LVKQLCKSRALST---VYNFIVEMRSSCGAKPDLVTYTILIDNVCNSNNLREAMRLVSLL 257
Query: 492 KERGAFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGE 671
+ G FKP+ +N ++ G + + M + L PD VT++ ++ +G
Sbjct: 258 YKEG-FKPDCFVYNTIMKGYCMVGRGAEAIGVYKKMKEVGLEPDVVTFNTLIFGLSKSGR 316
Query: 672 HERACEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVK-LQPDKFTYSI 848
+ A M PD V++ L+ +C+ A+ + +M K P+ TY+
Sbjct: 317 VKEARNFLDIMAEMGHFPDAVTYTSLMNGMCREGNALGALSLLKEMEAKGCNPNSCTYNT 376
Query: 849 LMEGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEML 1028
L+ GLS S+ ++ ++LY MK + Y+T + + A +V++ +
Sbjct: 377 LLHGLSKSRL---LDRGIELYGLMKSCDMKLETASYSTFVRALCRSGRIAEAYEVFDYAV 433
Query: 1029 EQKCEPDVVTYNTL 1070
E K DV Y +L
Sbjct: 434 ESKSLTDVSAYLSL 447
>ref|XP_006405989.1| hypothetical protein EUTSA_v10028308mg [Eutrema salsugineum]
gi|557107127|gb|ESQ47442.1| hypothetical protein
EUTSA_v10028308mg [Eutrema salsugineum]
Length = 823
Score = 143 bits (361), Expect = 1e-31
Identities = 83/262 (31%), Positives = 138/262 (52%), Gaps = 12/262 (4%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
L +K SEA+DLYE ++ PN T++ ++ F K ++A ++F M +G
Sbjct: 339 LISAFVKEVKFSEAEDLYEEMLHRGIVPNAITYNSMIDGFCKKNRLDEAKQMFDSMASKG 398
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
P+++TFN L+ C +T +D +L MT ++ D VT++ ++ F G+
Sbjct: 399 C-SPDVVTFNTLIDGCCRTKRIDDGMDLLHEMTRRRIVADTVTFNTLIHGFFQVGDLNGV 457
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR------------VKLQP 827
+IF EMTS ++ P++V+ N LL LC N +++A+ +F+ M+ ++P
Sbjct: 458 LDIFQEMTSTDVRPNIVTLNTLLDGLCNNGKLEKALTIFEVMQKSKMDLDTSHAFTGVEP 517
Query: 828 DKFTYSILMEGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVV 1007
D TYSIL +S ++ + A +LY+KM V D YN++I+GF K
Sbjct: 518 DVQTYSIL---ISAFVKERKFSEAEELYEKMLHRGIVPDTITYNSMINGFCKQNRLDEAK 574
Query: 1008 DVYEEMLEQKCEPDVVTYNTLI 1073
+++ M+ C DVVTYNTLI
Sbjct: 575 QMFDLMVSNGCSSDVVTYNTLI 596
Score = 122 bits (305), Expect = 3e-25
Identities = 70/251 (27%), Positives = 130/251 (51%), Gaps = 1/251 (0%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
L +K + SEA++LYE ++ P+ T++ ++ F K ++A ++F M G
Sbjct: 525 LISAFVKERKFSEAEELYEKMLHRGIVPDTITYNSMINGFCKQNRLDEAKQMFDLMVSNG 584
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
+++T+N L+ C +T +D +L M+ ++ + VTY+ ++ C G+ A
Sbjct: 585 C-SSDVVTYNTLIDGCCRTKRVDDGMDLLHEMSRRQIVANTVTYNTLIHGLCQVGDLNAA 643
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKM-RVKLQPDKFTYSILMEG 860
++F M S + PD++++NILL LC N + +A++MF+ M + K+ D +YSI++ G
Sbjct: 644 QDLFLNMNSHGVCPDILTYNILLDGLCDNGKLKKALEMFEVMLKNKIDVDIVSYSIIIHG 703
Query: 861 LSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKC 1040
+ ++ A DL+ + D YN +I GF + ++++M +
Sbjct: 704 MCKGSK---VDEAWDLFCSLPVDGVEPDVQTYNIMIHGFCGKGAISEANALFQKMKDDDY 760
Query: 1041 EPDVVTYNTLI 1073
PD TYNTLI
Sbjct: 761 VPDGCTYNTLI 771
Score = 119 bits (297), Expect = 3e-24
Identities = 67/229 (29%), Positives = 121/229 (52%), Gaps = 1/229 (0%)
Frame = +3
Query: 342 KSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNI 521
K L EAK +++ +++ + T++ L+ + +D + L M R N
Sbjct: 566 KQNRLDEAKQMFDLMVSNGCSSDVVTYNTLIDGCCRTKRVDDGMDLLHEMSRR-QIVANT 624
Query: 522 ITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTE 701
+T+N L+ + G+L+ + + M H + PD +TY++++ C G+ ++A E+F
Sbjct: 625 VTYNTLIHGLCQVGDLNAAQDLFLNMNSHGVCPDILTYNILLDGLCDNGKLKKALEMFEV 684
Query: 702 MTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVK-LQPDKFTYSILMEGLSNSKS 878
M +I D+VS++I++ +CK + VD A D+F + V ++PD TY+I++ G
Sbjct: 685 MLKNKIDVDIVSYSIIIHGMCKGSKVDEAWDLFCSLPVDGVEPDVQTYNIMIHGFC---G 741
Query: 879 KKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEM 1025
K ++ A L+QKMKD V D YNTLI G + + T ++ +EM
Sbjct: 742 KGAISEANALFQKMKDDDYVPDGCTYNTLIRGHLRAKETEASAELIKEM 790
Score = 110 bits (275), Expect = 1e-21
Identities = 69/253 (27%), Positives = 123/253 (48%), Gaps = 11/253 (4%)
Frame = +3
Query: 354 LSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG---------- 503
L+ D+++ + +T RPN T + LL N E AL +F M++
Sbjct: 454 LNGVLDIFQEMTSTDVRPNIVTLNTLLDGLCNNGKLEKALTIFEVMQKSKMDLDTSHAFT 513
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
+P++ T+++L++ K + E + E M ++PD +TY+ M+ FC + A
Sbjct: 514 GVEPDVQTYSILISAFVKERKFSEAEELYEKMLHRGIVPDTITYNSMINGFCKQNRLDEA 573
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKM-RVKLQPDKFTYSILMEG 860
++F M S D+V++N L+ C+ VD MD+ +M R ++ + TY+ L+ G
Sbjct: 574 KQMFDLMVSNGCSSDVVTYNTLIDGCCRTKRVDDGMDLLHEMSRRQIVANTVTYNTLIHG 633
Query: 861 LSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKC 1040
L +N+A DL+ M D YN L+ G ++++E ML+ K
Sbjct: 634 LCQVGD---LNAAQDLFLNMNSHGVCPDILTYNILLDGLCDNGKLKKALEMFEVMLKNKI 690
Query: 1041 EPDVVTYNTLIIH 1079
+ D+V+Y ++IIH
Sbjct: 691 DVDIVSY-SIIIH 702
Score = 105 bits (263), Expect = 2e-20
Identities = 70/267 (26%), Positives = 126/267 (47%), Gaps = 12/267 (4%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
+ +L K L +A++L+ + PN T++ ++ F N DA +L M +R
Sbjct: 269 IIDRLCKDGRLVDAQNLFIEMREKGIYPNVVTYNCMIDAFCNNGRWIDAERLLRDMIKR- 327
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
P+++TFN L++ K + E + E M ++P+ +TY+ M+ FC + A
Sbjct: 328 EISPDVVTFNSLISAFVKEVKFSEAEDLYEEMLHRGIVPNAITYNSMIDGFCKKNRLDEA 387
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKM-RVKLQPDKFTYSILMEG 860
++F M S+ PD+V+FN L+ C+ +D MD+ +M R ++ D T++ L+ G
Sbjct: 388 KQMFDSMASKGCSPDVVTFNTLIDGCCRTKRIDDGMDLLHEMTRRRIVADTVTFNTLIHG 447
Query: 861 LSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQK- 1037
+N +D++Q+M + + NTL+ G + ++E M + K
Sbjct: 448 FFQVGD---LNGVLDIFQEMTSTDVRPNIVTLNTLLDGLCNNGKLEKALTIFEVMQKSKM 504
Query: 1038 ----------CEPDVVTYNTLIIHYSK 1088
EPDV TY+ LI + K
Sbjct: 505 DLDTSHAFTGVEPDVQTYSILISAFVK 531
Score = 102 bits (253), Expect = 4e-19
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 36/229 (15%)
Frame = +3
Query: 495 ERGAFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEH 674
E+ + + +N ++ K G L + + M + + P+ VTY+ M+ AFC+ G
Sbjct: 255 EKSHIEAHAAIYNAIIDRLCKDGRLVDAQNLFIEMREKGIYPNVVTYNCMIDAFCNNGRW 314
Query: 675 ERACEIFTEMTSQEIGPDLVSFNILLRS-------------------------------- 758
A + +M +EI PD+V+FN L+ +
Sbjct: 315 IDAERLLRDMIKREISPDVVTFNSLISAFVKEVKFSEAEDLYEEMLHRGIVPNAITYNSM 374
Query: 759 ---LCKNNLVDRAMDMFDKMRVK-LQPDKFTYSILMEGLSNSKSKKHMNSAMDLYQKMKD 926
CK N +D A MFD M K PD T++ L++G + K ++ MDL +M
Sbjct: 375 IDGFCKKNRLDEAKQMFDSMASKGCSPDVVTFNTLIDGCCRT---KRIDDGMDLLHEMTR 431
Query: 927 SQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEPDVVTYNTLI 1073
+ VAD +NTLI GF ++ GV+D+++EM P++VT NTL+
Sbjct: 432 RRIVADTVTFNTLIHGFFQVGDLNGVLDIFQEMTSTDVRPNIVTLNTLL 480
Score = 93.2 bits (230), Expect = 2e-16
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Frame = +3
Query: 354 LSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFN 533
+SEA L++ ++ T PN T + ++ ++ +A+ L M +P + +
Sbjct: 173 ISEAIVLFDQMLETGYAPNVITFNTVVNGLCRDGRMLEAVALADRMVVEHGHQPTEVNYG 232
Query: 534 VLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQ 713
++ K G+ +L M + Y+ ++ C G A +F EM +
Sbjct: 233 TIVNGLCKMGDTVSALNLLRKMEKSHIEAHAAIYNAIIDRLCKDGRLVDAQNLFIEMREK 292
Query: 714 EIGPDLVSFNILLRSLCKN-NLVDRAMDMFDKMRVKLQPDKFTYSILMEGLSNSKSKKHM 890
I P++V++N ++ + C N +D + D ++ ++ PD T++ L +S +
Sbjct: 293 GIYPNVVTYNCMIDAFCNNGRWIDAERLLRDMIKREISPDVVTFNSL---ISAFVKEVKF 349
Query: 891 NSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEPDVVTYNTL 1070
+ A DLY++M V + YN++I GF K +++ M + C PDVVT+NTL
Sbjct: 350 SEAEDLYEEMLHRGIVPNAITYNSMIDGFCKKNRLDEAKQMFDSMASKGCSPDVVTFNTL 409
Query: 1071 I 1073
I
Sbjct: 410 I 410
Score = 76.6 bits (187), Expect = 2e-11
Identities = 66/288 (22%), Positives = 116/288 (40%), Gaps = 37/288 (12%)
Frame = +3
Query: 336 LLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKP 515
+LK LY + R + + ++L++ F + AL F + + G F+P
Sbjct: 97 ILKMNRPDVVISLYRKMEMRRIPFDIYSFNILIKCFCSCSKLSFALSTFGKLTKLG-FQP 155
Query: 516 NIITFNVLLAD------------------------------------CSKTGELDMVERI 587
+++TFN LL C L+ V
Sbjct: 156 DVVTFNTLLHGLCLEDRISEAIVLFDQMLETGYAPNVITFNTVVNGLCRDGRMLEAVALA 215
Query: 588 LELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQEIGPDLVSFNILLRSLCK 767
++ +H P V Y +V C G+ A + +M I +N ++ LCK
Sbjct: 216 DRMVVEHGHQPTEVNYGTIVNGLCKMGDTVSALNLLRKMEKSHIEAHAAIYNAIIDRLCK 275
Query: 768 NNLVDRAMDMFDKMRVK-LQPDKFTYSILMEGLSNSKSKKHMNSAMDLYQKMKDSQCVAD 944
+ + A ++F +MR K + P+ TY+ +++ N+ A L + M + D
Sbjct: 276 DGRLVDAQNLFIEMREKGIYPNVVTYNCMIDAFCNN---GRWIDAERLLRDMIKREISPD 332
Query: 945 RFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEPDVVTYNTLIIHYSK 1088
+N+LIS F K + D+YEEML + P+ +TYN++I + K
Sbjct: 333 VVTFNSLISAFVKEVKFSEAEDLYEEMLHRGIVPNAITYNSMIDGFCK 380
Score = 73.2 bits (178), Expect = 2e-10
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Frame = +3
Query: 516 NIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIF 695
++I FN ++ K D+V + M + D +++++++ FCS + A F
Sbjct: 86 SVIDFNKVIGVILKMNRPDVVISLYRKMEMRRIPFDIYSFNILIKCFCSCSKLSFALSTF 145
Query: 696 TEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKM-RVKLQPDKFTYSILMEGLSNS 872
++T PD+V+FN LL LC + + A+ +FD+M P+ T++ ++ GL
Sbjct: 146 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEAIVLFDQMLETGYAPNVITFNTVVNGLCRD 205
Query: 873 KSKKHMNSAMDLYQKMKDSQCVADRFV-----------YNTLISGFAKMRYTAGVVDVYE 1019
+M ++ +ADR V Y T+++G KM T +++
Sbjct: 206 -------------GRMLEAVALADRMVVEHGHQPTEVNYGTIVNGLCKMGDTVSALNLLR 252
Query: 1020 EMLEQKCEPDVVTYNTLIIHYSKVGNM 1100
+M + E YN +I K G +
Sbjct: 253 KMEKSHIEAHAAIYNAIIDRLCKDGRL 279
>ref|XP_004287745.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
isoform 1 [Fragaria vesca subsp. vesca]
gi|470102614|ref|XP_004287746.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform 2 [Fragaria vesca subsp. vesca]
Length = 450
Score = 143 bits (360), Expect = 1e-31
Identities = 84/263 (31%), Positives = 144/263 (54%), Gaps = 5/263 (1%)
Frame = +3
Query: 327 TQQLLKSKTLSEAKDLYETIITTRRRP-NFNTHHVLLRKFAKNTMKEDALKLFLFM-KER 500
T S LS+AK ++ +I T+ R P + H+ LL+ +A + D++ F M K +
Sbjct: 49 THNPFTSPNLSDAKRVFNSIATSTRNPLDLRRHNALLQSYAAISTVNDSIAFFNHMIKTQ 108
Query: 501 GAFKPNIITFNVLLADCSKTGE--LDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEH 674
AF P T+++LLA + L V ++L M ++ PD+VT D+ VR+ C AG
Sbjct: 109 PAFSPERSTYHILLAQSCTVPDQTLQSVHQVLNFMVNNGFHPDKVTTDIAVRSLCLAGHV 168
Query: 675 ERACEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR-VKLQPDKFTYSIL 851
+ A ++ +M + PD ++N L++ LCK+ ++ D+M+ L+PD T++I+
Sbjct: 169 DEAVQVMKQMALKSTVPDAYTYNFLVKCLCKSRVLSTVRGFIDEMKSFGLKPDLVTFTIM 228
Query: 852 MEGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLE 1031
++ ++NS K++ A L +++ D +VYNT++ G+ + VV V +EM
Sbjct: 229 IDNVANS---KNLREATRLVDELEKEGFKPDCYVYNTIMKGYCMLSKGNEVVQVLKEMQA 285
Query: 1032 QKCEPDVVTYNTLIIHYSKVGNM 1100
+ EPD+VTYNTLI SK G +
Sbjct: 286 KGVEPDLVTYNTLIFGLSKCGRV 308
Score = 86.7 bits (213), Expect = 2e-14
Identities = 57/250 (22%), Positives = 117/250 (46%), Gaps = 1/250 (0%)
Frame = +3
Query: 354 LSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFN 533
+ EA + + + P+ T++ L++ K+ + MK G KP+++TF
Sbjct: 168 VDEAVQVMKQMALKSTVPDAYTYNFLVKCLCKSRVLSTVRGFIDEMKSFG-LKPDLVTFT 226
Query: 534 VLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQ 713
+++ + + + L R+++ + PD Y+ +++ +C + ++ EM ++
Sbjct: 227 IMIDNVANSKNLREATRLVDELEKEGFKPDCYVYNTIMKGYCMLSKGNEVVQVLKEMQAK 286
Query: 714 EIGPDLVSFNILLRSLCK-NNLVDRAMDMFDKMRVKLQPDKFTYSILMEGLSNSKSKKHM 890
+ PDLV++N L+ L K ++D ++ + + PD+ TY+ LM GL K
Sbjct: 287 GVEPDLVTYNTLIFGLSKCGRVMDAKKYLWIMVEMGHFPDEVTYTSLMNGLCR---KGDA 343
Query: 891 NSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEPDVVTYNTL 1070
A+ L +M+ C + YNTL+ G K R +++Y M + + D +Y TL
Sbjct: 344 LGAVALLSEMQAQGCRPNECTYNTLLHGLCKGRLLEKGLELYGLMKKDGMKLDTASYGTL 403
Query: 1071 IIHYSKVGNM 1100
+ + G +
Sbjct: 404 VRTLCRAGRI 413
Score = 77.4 bits (189), Expect = 9e-12
Identities = 47/215 (21%), Positives = 107/215 (49%), Gaps = 1/215 (0%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
+ + SK L EA L + + +P+ ++ +++ + + + +++ M+ +G
Sbjct: 228 MIDNVANSKNLREATRLVDELEKEGFKPDCYVYNTIMKGYCMLSKGNEVVQVLKEMQAKG 287
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
+P+++T+N L+ SK G + ++ L +M + PD VTY ++ C G+ A
Sbjct: 288 V-EPDLVTYNTLIFGLSKCGRVMDAKKYLWIMVEMGHFPDEVTYTSLMNGLCRKGDALGA 346
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVK-LQPDKFTYSILMEG 860
+ +EM +Q P+ ++N LL LCK L+++ ++++ M+ ++ D +Y L+
Sbjct: 347 VALLSEMQAQGCRPNECTYNTLLHGLCKGRLLEKGLELYGLMKKDGMKLDTASYGTLVRT 406
Query: 861 LSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTL 965
L + + A +++ +S+ + + Y TL
Sbjct: 407 LCRA---GRIADAYEVFDYAVESKSLTNVSAYLTL 438
Score = 76.3 bits (186), Expect = 2e-11
Identities = 57/250 (22%), Positives = 113/250 (45%), Gaps = 1/250 (0%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
L + L KS+ LS + + + + +P+ T +++ A + +A +L +++ G
Sbjct: 193 LVKCLCKSRVLSTVRGFIDEMKSFGLKPDLVTFTIMIDNVANSKNLREATRLVDELEKEG 252
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
FKP+ +N ++ + + V ++L+ M + PD VTY+ ++ G A
Sbjct: 253 -FKPDCYVYNTIMKGYCMLSKGNEVVQVLKEMQAKGVEPDLVTYNTLIFGLSKCGRVMDA 311
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVK-LQPDKFTYSILMEG 860
+ M PD V++ L+ LC+ A+ + +M+ + +P++ TY+ L+ G
Sbjct: 312 KKYLWIMVEMGHFPDEVTYTSLMNGLCRKGDALGAVALLSEMQAQGCRPNECTYNTLLHG 371
Query: 861 LSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKC 1040
L + + ++LY MK D Y TL+ + A +V++ +E K
Sbjct: 372 LCKGRL---LEKGLELYGLMKKDGMKLDTASYGTLVRTLCRAGRIADAYEVFDYAVESKS 428
Query: 1041 EPDVVTYNTL 1070
+V Y TL
Sbjct: 429 LTNVSAYLTL 438
>ref|XP_004293246.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1089
Score = 141 bits (355), Expect = 5e-31
Identities = 80/253 (31%), Positives = 132/253 (52%), Gaps = 1/253 (0%)
Frame = +3
Query: 342 KSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNI 521
KS ++E +LY+ +I +PN TH++++ K+ + A+ L+ + G F P+
Sbjct: 811 KSGNITELFELYDEMICRGHKPNTITHNIVISSLVKSDSLDRAINLYYDLVS-GDFSPSP 869
Query: 522 ITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTE 701
T+ L+ K+G L+ E M ++ P+ +++++ F G+ E ACE+F
Sbjct: 870 CTYGPLIDGLFKSGRLEEAMHFFEEMAEYGCKPNCAIFNILINGFSKVGDVETACELFKR 929
Query: 702 MTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVK-LQPDKFTYSILMEGLSNSKS 878
M + I PDL SF IL+ C+ VD A+ F+++R L PD +Y++++ GL S
Sbjct: 930 MIKEGIRPDLKSFTILVDCYCQAGRVDDALHYFEELRQSGLDPDSVSYNLMINGLGRS-- 987
Query: 879 KKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEPDVVT 1058
+ M A+ LY +M+ + D F YN+LI + +Y+E+L EPDV T
Sbjct: 988 -RRMEEALVLYDEMRKRRITPDIFTYNSLILNLGLVGMVEEAGRIYKELLLTGLEPDVFT 1046
Query: 1059 YNTLIIHYSKVGN 1097
YN LI YS GN
Sbjct: 1047 YNALIRLYSTSGN 1059
Score = 104 bits (259), Expect = 7e-20
Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 1/247 (0%)
Frame = +3
Query: 336 LLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKP 515
LL+ L EA L+ ++ + P T+ + + + K+ A++ + MK RG P
Sbjct: 388 LLRLCRLDEALQLFNSMDSLGVTPTAYTYILFIDYYGKSGKSRKAIEAYERMKTRGIV-P 446
Query: 516 NIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIF 695
NI+ N L ++ G L + I + + L PD VTY++M++ + G+ + A ++
Sbjct: 447 NIVACNASLYGLAEEGRLHEAKHIYDELIYSGLSPDSVTYNMMMKCYSRVGQIDEAIKLL 506
Query: 696 TEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR-VKLQPDKFTYSILMEGLSNS 872
+EM D++ N L+ L K VD A MF +M+ +KL P TY+ L+ L
Sbjct: 507 SEMERNGCEADVIIVNSLIDMLYKAGRVDEAWQMFYRMKEMKLTPTVVTYNTLLAALG-- 564
Query: 873 KSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEPDV 1052
+ + A+ +++ M + C + +NTL++ K + + +M C PDV
Sbjct: 565 -KEGQVGKAIAMFENMTEQGCPPNAITFNTLLNCLCKNDEVNLALKMLCKMTVMNCCPDV 623
Query: 1053 VTYNTLI 1073
+TYNT+I
Sbjct: 624 LTYNTII 630
Score = 102 bits (254), Expect = 3e-19
Identities = 81/331 (24%), Positives = 140/331 (42%), Gaps = 72/331 (21%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
L L++S EA +Y+T+++ RP+ T+ L+ K + + L M+ G
Sbjct: 174 LIYMLIQSGYCREALQVYQTMVSQGIRPSLKTYSALMVALGKRRDVQAVMGLLKEMETLG 233
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
+PN+ TF + + + G++D +I + M + PD +TY +++ A C+AG+ + A
Sbjct: 234 -LRPNVYTFTICIRVLGRAGKIDEAYQIFKRMDNEGCGPDVITYTVLIDALCNAGKLDNA 292
Query: 684 CEIF-----------------------------------TEMTSQEIGPDLVSFNILLRS 758
++F +EM + PD+V+F IL+ S
Sbjct: 293 KKLFANMKARGHKPDQVTYITLLDKFSDCKDLDTVREFWSEMKADGYAPDVVTFTILVDS 352
Query: 759 LCKNNLVDRAMDMFDKMRVK-LQPDKFTYSILMEGL------------------------ 863
LCK VD A M D MR + + P+ TY+ L+ GL
Sbjct: 353 LCKAGNVDEAFSMLDIMRKEGVSPNLHTYNTLICGLLRLCRLDEALQLFNSMDSLGVTPT 412
Query: 864 ------------SNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVV 1007
+ KS+K A++ Y++MK V + N + G A+
Sbjct: 413 AYTYILFIDYYGKSGKSRK----AIEAYERMKTRGIVPNIVACNASLYGLAEEGRLHEAK 468
Query: 1008 DVYEEMLEQKCEPDVVTYNTLIIHYSKVGNM 1100
+Y+E++ PD VTYN ++ YS+VG +
Sbjct: 469 HIYDELIYSGLSPDSVTYNMMMKCYSRVGQI 499
Score = 94.7 bits (234), Expect = 6e-17
Identities = 68/256 (26%), Positives = 120/256 (46%), Gaps = 5/256 (1%)
Frame = +3
Query: 348 KTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIIT 527
K L ++ + + P+ T +L+ K ++A + M++ G PN+ T
Sbjct: 322 KDLDTVREFWSEMKADGYAPDVVTFTILVDSLCKAGNVDEAFSMLDIMRKEGV-SPNLHT 380
Query: 528 FNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMT 707
+N L+ + LD ++ M + P TY L + + +G+ +A E + M
Sbjct: 381 YNTLICGLLRLCRLDEALQLFNSMDSLGVTPTAYTYILFIDYYGKSGKSRKAIEAYERMK 440
Query: 708 SQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVK-LQPDKFTYSILMEGLSNSKSKK 884
++ I P++V+ N L L + + A ++D++ L PD TY+++M+ S
Sbjct: 441 TRGIVPNIVACNASLYGLAEEGRLHEAKHIYDELIYSGLSPDSVTYNMMMKCYSR---VG 497
Query: 885 HMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVD----VYEEMLEQKCEPDV 1052
++ A+ L +M+ + C AD + N+LI M Y AG VD ++ M E K P V
Sbjct: 498 QIDEAIKLLSEMERNGCEADVIIVNSLID----MLYKAGRVDEAWQMFYRMKEMKLTPTV 553
Query: 1053 VTYNTLIIHYSKVGNM 1100
VTYNTL+ K G +
Sbjct: 554 VTYNTLLAALGKEGQV 569
Score = 90.1 bits (222), Expect = 1e-15
Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 37/288 (12%)
Frame = +3
Query: 342 KSKTLSEAKDLYETIITTRR-RPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPN 518
+ KTL +A++L+ T +P ++ L+ K+ E A LF MK G P+
Sbjct: 741 RGKTL-DAQNLFTKFTRTLGVQPTLEAYNCLIEWLLKDHFTEQAWDLFKEMKIAGC-APD 798
Query: 519 IITFNVLLADCSKTGEL--------------------------------DMVERILELMT 602
+ T+N+LL K+G + D ++R + L
Sbjct: 799 VFTYNLLLDAHGKSGNITELFELYDEMICRGHKPNTITHNIVISSLVKSDSLDRAINLYY 858
Query: 603 D---HDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQEIGPDLVSFNILLRSLCKNN 773
D D P TY ++ +G E A F EM P+ FNIL+ K
Sbjct: 859 DLVSGDFSPSPCTYGPLIDGLFKSGRLEEAMHFFEEMAEYGCKPNCAIFNILINGFSKVG 918
Query: 774 LVDRAMDMFDKM-RVKLQPDKFTYSILMEGLSNSKSKKHMNSAMDLYQKMKDSQCVADRF 950
V+ A ++F +M + ++PD +++IL++ + ++ A+ +++++ S D
Sbjct: 919 DVETACELFKRMIKEGIRPDLKSFTILVDCYCQA---GRVDDALHYFEELRQSGLDPDSV 975
Query: 951 VYNTLISGFAKMRYTAGVVDVYEEMLEQKCEPDVVTYNTLIIHYSKVG 1094
YN +I+G + R + +Y+EM +++ PD+ TYN+LI++ VG
Sbjct: 976 SYNLMINGLGRSRRMEEALVLYDEMRKRRITPDIFTYNSLILNLGLVG 1023
Score = 89.0 bits (219), Expect = 3e-15
Identities = 56/233 (24%), Positives = 113/233 (48%), Gaps = 10/233 (4%)
Frame = +3
Query: 405 PNFNTHHVLLRKFAKNTMK---------EDALKLFLFMKERGAFKPNIITFNVLLADCSK 557
P H +L F+ N + +AL+++ M +G +P++ T++ L+ K
Sbjct: 157 PRLRKHGFVLNAFSYNGLIYMLIQSGYCREALQVYQTMVSQG-IRPSLKTYSALMVALGK 215
Query: 558 TGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQEIGPDLVS 737
++ V +L+ M L P+ T+ + +R AG+ + A +IF M ++ GPD+++
Sbjct: 216 RRDVQAVMGLLKEMETLGLRPNVYTFTICIRVLGRAGKIDEAYQIFKRMDNEGCGPDVIT 275
Query: 738 FNILLRSLCKNNLVDRAMDMFDKMRVK-LQPDKFTYSILMEGLSNSKSKKHMNSAMDLYQ 914
+ +L+ +LC +D A +F M+ + +PD+ TY L++ S+ K +++ + +
Sbjct: 276 YTVLIDALCNAGKLDNAKKLFANMKARGHKPDQVTYITLLDKFSDCKD---LDTVREFWS 332
Query: 915 KMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEPDVVTYNTLI 1073
+MK D + L+ K + + M ++ P++ TYNTLI
Sbjct: 333 EMKADGYAPDVVTFTILVDSLCKAGNVDEAFSMLDIMRKEGVSPNLHTYNTLI 385
Score = 89.0 bits (219), Expect = 3e-15
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 1/217 (0%)
Frame = +3
Query: 336 LLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKP 515
L + L EAK +Y+ +I + P+ T++++++ +++ ++A+KL M ER +
Sbjct: 458 LAEEGRLHEAKHIYDELIYSGLSPDSVTYNMMMKCYSRVGQIDEAIKLLSEM-ERNGCEA 516
Query: 516 NIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIF 695
++I N L+ K G +D ++ M + L P VTY+ ++ A G+ +A +F
Sbjct: 517 DVIIVNSLIDMLYKAGRVDEAWQMFYRMKEMKLTPTVVTYNTLLAALGKEGQVGKAIAMF 576
Query: 696 TEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRV-KLQPDKFTYSILMEGLSNS 872
MT Q P+ ++FN LL LCKN+ V+ A+ M KM V PD TY+ ++ GL
Sbjct: 577 ENMTEQGCPPNAITFNTLLNCLCKNDEVNLALKMLCKMTVMNCCPDVLTYNTIIHGLIR- 635
Query: 873 KSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAK 983
+ ++ A + +MK + D TL+ K
Sbjct: 636 --ENRIDYAFWFFHQMK-KLLLPDHITLYTLLPSVVK 669
Score = 84.0 bits (206), Expect = 1e-13
Identities = 55/225 (24%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Frame = +3
Query: 429 LLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFNVLLADCSKTGELDMVERILELMTDH 608
LLR DA LF +P + +N L+ K + + + M
Sbjct: 734 LLRFLCTRGKTLDAQNLFTKFTRTLGVQPTLEAYNCLIEWLLKDHFTEQAWDLFKEMKIA 793
Query: 609 DLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRA 788
PD TY+L++ A +G E++ EM + P+ ++ NI++ SL K++ +DRA
Sbjct: 794 GCAPDVFTYNLLLDAHGKSGNITELFELYDEMICRGHKPNTITHNIVISSLVKSDSLDRA 853
Query: 789 MDMF-DKMRVKLQPDKFTYSILMEGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTL 965
++++ D + P TY L++GL S + AM +++M + C + ++N L
Sbjct: 854 INLYYDLVSGDFSPSPCTYGPLIDGLFKSG---RLEEAMHFFEEMAEYGCKPNCAIFNIL 910
Query: 966 ISGFAKMRYTAGVVDVYEEMLEQKCEPDVVTYNTLIIHYSKVGNM 1100
I+GF+K+ ++++ M+++ PD+ ++ L+ Y + G +
Sbjct: 911 INGFSKVGDVETACELFKRMIKEGIRPDLKSFTILVDCYCQAGRV 955
Score = 79.7 bits (195), Expect = 2e-12
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
L L KS L EA +E + +PN ++L+ F+K E A +LF M + G
Sbjct: 875 LIDGLFKSGRLEEAMHFFEEMAEYGCKPNCAIFNILINGFSKVGDVETACELFKRMIKEG 934
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
+P++ +F +L+ + G +D E + L PD V+Y+LM+ + E A
Sbjct: 935 -IRPDLKSFTILVDCYCQAGRVDDALHYFEELRQSGLDPDSVSYNLMINGLGRSRRMEEA 993
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVK-LQPDKFTYSILMEG 860
++ EM + I PD+ ++N L+ +L +V+ A ++ ++ + L+PD FTY+ L+
Sbjct: 994 LVLYDEMRKRRITPDIFTYNSLILNLGLVGMVEEAGRIYKELLLTGLEPDVFTYNALIRL 1053
Query: 861 LSNSKSKKHMNSAMDLYQKMKDSQC 935
S S + + A +Y+ M C
Sbjct: 1054 YSTS---GNTDDAYAVYKNMMVGGC 1075
>ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
isoform X1 [Citrus sinensis]
gi|568825365|ref|XP_006467050.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X2 [Citrus sinensis]
gi|568825367|ref|XP_006467051.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X3 [Citrus sinensis]
Length = 465
Score = 140 bits (352), Expect = 1e-30
Identities = 85/262 (32%), Positives = 144/262 (54%), Gaps = 7/262 (2%)
Frame = +3
Query: 336 LLKSKTLSEAKDLYETIIT-TRRRPNFNT-HHVLLRKFAKNTMKEDALKLFLFM-KERGA 506
+ KS LSEA ++ +++T T + P T H+ LL+ +A + +D++ L M K +
Sbjct: 60 IFKSPELSEAIKIFNSLVTATMQTPRDRTFHNSLLQSYASISTVDDSISLLNHMIKANPS 119
Query: 507 FKPNIITFNVLLADCSKTGE--LDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHER 680
F P+ T+++LLA + + + + L LMT + P++ T D+ VR+ CS +
Sbjct: 120 FNPDRSTYHILLAQSCQAPDNSFSSIRKTLSLMTTNGYPPNQGTTDIAVRSLCSVNRLDD 179
Query: 681 ACEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVKL--QPDKFTYSILM 854
A E+ ++ PD+ ++N L++ LCK + + D+MR L +P+ TY+IL+
Sbjct: 180 AIELVKGLSLNSFPPDIFTYNFLVKCLCKCRSLTTVYNFVDQMRASLGIKPNLVTYTILI 239
Query: 855 EGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQ 1034
+ + N+K+ + AM L + DS D FVYNT++ G+ + V+ VY +M E+
Sbjct: 240 DNVCNTKN---LREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKMKEE 296
Query: 1035 KCEPDVVTYNTLIIHYSKVGNM 1100
EPD+VTYNTLI SK G +
Sbjct: 297 GVEPDLVTYNTLIFGLSKCGRV 318
Score = 89.4 bits (220), Expect = 2e-15
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 1/249 (0%)
Frame = +3
Query: 330 QQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAF 509
+ L L +A +L + + P+ T++ L++ K M+
Sbjct: 169 RSLCSVNRLDDAIELVKGLSLNSFPPDIFTYNFLVKCLCKCRSLTTVYNFVDQMRASLGI 228
Query: 510 KPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 689
KPN++T+ +L+ + T L R++ ++D PD Y+ +++ +C+
Sbjct: 229 KPNLVTYTILIDNVCNTKNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEVIG 288
Query: 690 IFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKM-RVKLQPDKFTYSILMEGLS 866
++ +M + + PDLV++N L+ L K V A M PD TY+ LM G+
Sbjct: 289 VYNKMKEEGVEPDLVTYNTLIFGLSKCGRVGEAKKFLKIMVEAGFLPDAVTYTSLMNGMC 348
Query: 867 NSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCEP 1046
A+ L ++M+ C + YNTL+ G K R +++Y M E +
Sbjct: 349 REGDAL---GALALLEEMEGKGCSPNSCTYNTLLYGLCKSRLMEKGIELYRAMKEGGVKL 405
Query: 1047 DVVTYNTLI 1073
+ Y TL+
Sbjct: 406 ETAAYATLV 414
Score = 85.1 bits (209), Expect = 4e-14
Identities = 54/249 (21%), Positives = 107/249 (42%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
L + +K L EA L + + +P+ ++ +++ + + + + ++ MKE G
Sbjct: 238 LIDNVCNTKNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKMKEEG 297
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
+P+++T+N L+ SK G + ++ L++M + +PD VTY ++ C G+ A
Sbjct: 298 V-EPDLVTYNTLIFGLSKCGRVGEAKKFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGA 356
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVKLQPDKFTYSILMEGL 863
+ EM + P+ ++N LL LCK+ L+++
Sbjct: 357 LALLEEMEGKGCSPNSCTYNTLLYGLCKSRLMEK-------------------------- 390
Query: 864 SNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCE 1043
++LY+ MK+ + Y TL+ + A +V++ +E K
Sbjct: 391 -----------GIELYRAMKEGGVKLETAAYATLVRALCRHGKVAEAYEVFDYAVESKSL 439
Query: 1044 PDVVTYNTL 1070
DV Y TL
Sbjct: 440 TDVAAYTTL 448
>ref|XP_002306437.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222855886|gb|EEE93433.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 462
Score = 140 bits (352), Expect = 1e-30
Identities = 80/265 (30%), Positives = 146/265 (55%), Gaps = 8/265 (3%)
Frame = +3
Query: 330 QQLLKSKTLSEAKDLYETIITTRRRP---NFNTHHVLLRKFAKNTMKEDALKLFLFM-KE 497
+ L K+ +L+EAK L+ + I+T + P N H+ L+ + + +D++ L M K
Sbjct: 54 KSLFKTSSLNEAKSLFNSFISTTKAPLLDNLRLHNSFLQSYTSISTLDDSISLLDHMVKT 113
Query: 498 RGAFKPNIITFNVLLADCSKTGE--LDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGE 671
+ P+ T++VLL+ + + L +++L LM + P++ T D+ +R+ CSAG
Sbjct: 114 LPSLSPDRSTYHVLLSQSCREPDSSLSSAQKVLNLMINKGFKPNQFTVDVAIRSLCSAGR 173
Query: 672 HERACEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMR--VKLQPDKFTYS 845
+ A + E +S+ PD ++N L++ LCK+ + + D+M+ ++PD TY+
Sbjct: 174 VDDAILLVKEFSSKHSKPDTFTYNFLVKCLCKSRIFNSVYSFIDEMKSSFDIKPDLVTYT 233
Query: 846 ILMEGLSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEM 1025
IL++ + N+ K++ A L +K+ D F+YNT++ G+ + V +Y++M
Sbjct: 234 ILIDNVCNA---KNIREADRLVAVLKECGLKPDAFLYNTIMKGYCLLNKGIEAVRIYKQM 290
Query: 1026 LEQKCEPDVVTYNTLIIHYSKVGNM 1100
E+ EPD+VTYNTLI SK G +
Sbjct: 291 KEEGVEPDLVTYNTLIFGLSKCGRV 315
Score = 84.0 bits (206), Expect = 1e-13
Identities = 57/250 (22%), Positives = 118/250 (47%), Gaps = 2/250 (0%)
Frame = +3
Query: 330 QQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAF 509
+ L + + +A L + + +P+ T++ L++ K+ + MK
Sbjct: 166 RSLCSAGRVDDAILLVKEFSSKHSKPDTFTYNFLVKCLCKSRIFNSVYSFIDEMKSSFDI 225
Query: 510 KPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 689
KP+++T+ +L+ + + +R++ ++ + L PD Y+ +++ +C + A
Sbjct: 226 KPDLVTYTILIDNVCNAKNIREADRLVAVLKECGLKPDAFLYNTIMKGYCLLNKGIEAVR 285
Query: 690 IFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRVKLQ--PDKFTYSILMEGL 863
I+ +M + + PDLV++N L+ L K V A + K+ V+ PD TY+ LM G+
Sbjct: 286 IYKQMKEEGVEPDLVTYNTLIFGLSKCGRVSEAKKLL-KIMVESGHFPDAVTYTSLMNGM 344
Query: 864 SNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLISGFAKMRYTAGVVDVYEEMLEQKCE 1043
+ + A L ++M+ C + YNTL+ GF K R V++Y + + +
Sbjct: 345 CR---EGDVLGAAALLEEMELKGCSPNSCTYNTLLHGFCKGRRLNKGVELYGVIKKGGMK 401
Query: 1044 PDVVTYNTLI 1073
+ +Y T +
Sbjct: 402 LETASYATFV 411
Score = 76.6 bits (187), Expect = 2e-11
Identities = 45/217 (20%), Positives = 106/217 (48%), Gaps = 1/217 (0%)
Frame = +3
Query: 324 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 503
L + +K + EA L + +P+ ++ +++ + +A++++ MKE G
Sbjct: 235 LIDNVCNAKNIREADRLVAVLKECGLKPDAFLYNTIMKGYCLLNKGIEAVRIYKQMKEEG 294
Query: 504 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 683
+P+++T+N L+ SK G + +++L++M + PD VTY ++ C G+ A
Sbjct: 295 V-EPDLVTYNTLIFGLSKCGRVSEAKKLLKIMVESGHFPDAVTYTSLMNGMCREGDVLGA 353
Query: 684 CEIFTEMTSQEIGPDLVSFNILLRSLCKNNLVDRAMDMFDKMRV-KLQPDKFTYSILMEG 860
+ EM + P+ ++N LL CK +++ ++++ ++ ++ + +Y+ +
Sbjct: 354 AALLEEMELKGCSPNSCTYNTLLHGFCKGRRLNKGVELYGVIKKGGMKLETASYATFVRA 413
Query: 861 LSNSKSKKHMNSAMDLYQKMKDSQCVADRFVYNTLIS 971
L + + A +++ +S+ + D Y TL S
Sbjct: 414 LCR---EGRVAEAYEVFDYAVESKSLTDVAAYTTLES 447