BLASTX nr result

ID: Ephedra27_contig00028781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00028781
         (584 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006836353.1| hypothetical protein AMTR_s00092p00107280 [A...    61   2e-07

>ref|XP_006836353.1| hypothetical protein AMTR_s00092p00107280 [Amborella trichopoda]
           gi|548838871|gb|ERM99206.1| hypothetical protein
           AMTR_s00092p00107280 [Amborella trichopoda]
          Length = 238

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
 Frame = +2

Query: 62  HVPSIEALRQVFGSYGPAMSPCKFSVYCLETRSSPSESGKFIGNLREGLYVSTGLYITRC 241
           ++P ++AL +        +    F V C         + KF      G  VS  +  T  
Sbjct: 77  NIPLVQALLRSASHQATILDTGLFQV-CFGESKDGIPASKF----SSGDTVSIHMLFTGL 131

Query: 242 EDQERLAYGFLALSKSYLREMKGLEWFACMKSLDGDKVVCLFVWEDLKSAYQSF--VDTP 415
           ++   L YG +AL+KSY   ++G+   +C+ SLD  KV+CL VW+ L   Y     +D  
Sbjct: 132 DNLYNLTYGCMALAKSYFSNVEGVSSASCLSSLDNPKVLCLHVWKSLDMCYSWLLGLDGG 191

Query: 416 SSCKLFLEDLVLSRKMDLFKVAH 484
           ++ +  +  LV   K D+FKV +
Sbjct: 192 TTMRPLISHLVKDIKYDVFKVVY 214


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