BLASTX nr result
ID: Ephedra27_contig00028760
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00028760
(590 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera] 134 1e-29
gb|ABW74566.1| integrase [Boechera divaricarpa] 134 2e-29
emb|CAN65499.1| hypothetical protein VITISV_010671 [Vitis vinifera] 133 3e-29
emb|CAN77815.1| hypothetical protein VITISV_023977 [Vitis vinifera] 132 5e-29
emb|CAN63433.1| hypothetical protein VITISV_033829 [Vitis vinifera] 132 5e-29
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 130 3e-28
gb|ABA95820.1| retrotransposon protein, putative, unclassified [... 129 4e-28
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera] 129 4e-28
gb|ABA99612.1| retrotransposon protein, putative, unclassified [... 129 7e-28
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group... 129 7e-28
emb|CAN63448.1| hypothetical protein VITISV_008725 [Vitis vinifera] 127 2e-27
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza... 127 3e-27
ref|XP_002283141.2| PREDICTED: LRR receptor-like serine/threonin... 126 5e-27
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 126 5e-27
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 125 1e-26
emb|CAN62530.1| hypothetical protein VITISV_029281 [Vitis vinifera] 124 2e-26
gb|ABR16288.1| unknown [Picea sitchensis] 123 3e-26
emb|CAN69241.1| hypothetical protein VITISV_009386 [Vitis vinifera] 123 4e-26
gb|AGH20668.1| reverse transcriptase, partial [Arabis hirsuta] 122 5e-26
gb|AGH20669.1| reverse transcriptase, partial [Lepidium sativum] 122 7e-26
>emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera]
Length = 1102
Score = 134 bits (338), Expect = 1e-29
Identities = 64/136 (47%), Positives = 90/136 (66%)
Frame = +1
Query: 31 KEKHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLA 210
+ K IG W++RTK N + SIN+HK LV+KGY Q +G+++ + + P+A L + LA
Sbjct: 640 RHKRAIGVKWVYRTKLNSDGSINKHKARLVVKGYAQMFGVDFSETFAPVARLDTIRMLLA 699
Query: 211 FITHMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRS 390
++QMD+KSAF NG L EEIF+E+ EGF G E +YLLKKALYGL QA R+
Sbjct: 700 LAAQKGWNIHQMDVKSAFLNGYLEEEIFVEQPEGFIVKGMEEKVYLLKKALYGLKQAPRA 759
Query: 391 WFSRLDKYLRSKNYTQ 438
W+SR+D +L +T+
Sbjct: 760 WYSRIDSHLLGLGFTK 775
>gb|ABW74566.1| integrase [Boechera divaricarpa]
Length = 1165
Score = 134 bits (336), Expect = 2e-29
Identities = 60/134 (44%), Positives = 92/134 (68%)
Frame = +1
Query: 31 KEKHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLA 210
+EKH IG W+F+TK + +I ++K LV+KGY QEYG++Y+K ++P+A + + LA
Sbjct: 686 EEKHSIGVKWVFKTKYQADDNIQKYKARLVVKGYAQEYGVDYEKTFSPVARFDTLRTLLA 745
Query: 211 FITHMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRS 390
+M+ +YQ D+KSAF NG LREE+++++ EGF GRE +Y L KALYGL QA R+
Sbjct: 746 LGAYMHWPIYQFDVKSAFLNGELREEVYVDQPEGFIVEGREGFVYRLYKALYGLKQAPRA 805
Query: 391 WFSRLDKYLRSKNY 432
W++++D Y +
Sbjct: 806 WYNKIDSYFAETGF 819
>emb|CAN65499.1| hypothetical protein VITISV_010671 [Vitis vinifera]
Length = 750
Score = 133 bits (335), Expect = 3e-29
Identities = 63/132 (47%), Positives = 90/132 (68%)
Frame = +1
Query: 37 KHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLAFI 216
K IG W++RTK N + SIN+HK+ LV+KGY Q +G+++ + + P+ L + LA
Sbjct: 551 KKAIGVKWVYRTKLNCDGSINKHKSRLVVKGYAQMFGVDFSETFAPVGRLDTIRILLALA 610
Query: 217 THMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRSWF 396
M ++YQ D+KSAF NG L EEIF+E+ EGF G+E+ +Y LKKALYGL QA R+W+
Sbjct: 611 AQMGWKIYQPDVKSAFLNGYLEEEIFVEQPEGFVVKGKEDKVYHLKKALYGLKQAPRAWY 670
Query: 397 SRLDKYLRSKNY 432
SR++ YL S +
Sbjct: 671 SRINAYLLSLGF 682
>emb|CAN77815.1| hypothetical protein VITISV_023977 [Vitis vinifera]
Length = 1120
Score = 132 bits (333), Expect = 5e-29
Identities = 59/136 (43%), Positives = 95/136 (69%)
Frame = +1
Query: 31 KEKHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLA 210
+ + +IG W++RTK N + S+N++K LV+KGY Q +G+++ + + P+A L + LA
Sbjct: 668 QHRKVIGVKWVYRTKLNADGSVNKYKARLVVKGYSQVFGVDFSEXFAPVARLDTIRMLLA 727
Query: 211 FITHMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRS 390
+ YQ+D+K AF NG L+EEI++E+ EGF+ G+E +YLLKKALYGL QA R+
Sbjct: 728 LTAQKGWKTYQLDVKXAFLNGYLQEEIYVEQPEGFQVKGQEEKVYLLKKALYGLKQAPRA 787
Query: 391 WFSRLDKYLRSKNYTQ 438
W+SR+D++L+S + +
Sbjct: 788 WYSRIDEHLQSLGFVK 803
>emb|CAN63433.1| hypothetical protein VITISV_033829 [Vitis vinifera]
Length = 1072
Score = 132 bits (333), Expect = 5e-29
Identities = 62/127 (48%), Positives = 88/127 (69%)
Frame = +1
Query: 37 KHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLAFI 216
K IG W++RTK N + SIN+HK LV+KGY Q +G+++ + + P+A L + LA
Sbjct: 686 KKPIGVKWVYRTKLNSDGSINKHKARLVVKGYAQMFGVDFSETFAPVARLDTIRMLLALA 745
Query: 217 THMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRSWF 396
++Y++D+KSAF NG L EEIF+E+ EGF G+E +YLLKKALYGL QA R+W+
Sbjct: 746 AQRKWKIYKLDVKSAFLNGYLEEEIFVEQPEGFAIKGKEEKVYLLKKALYGLRQAPRAWY 805
Query: 397 SRLDKYL 417
SR+D +L
Sbjct: 806 SRIDTHL 812
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 130 bits (326), Expect = 3e-28
Identities = 57/132 (43%), Positives = 90/132 (68%)
Frame = +1
Query: 37 KHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLAFI 216
K++IG W+FRTK N + SI +HK LV KGY Q+ G+++ + ++P+A ++ LA
Sbjct: 857 KNVIGLKWVFRTKYNADGSIQKHKARLVAKGYSQQQGVDFDETFSPVARFETVRVVLALA 916
Query: 217 THMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRSWF 396
++L VYQ D+KSAF NG+L EE+++ + +GF G EN +Y L+KALYGL QA R+W+
Sbjct: 917 AQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQGFMITGNENKVYKLRKALYGLKQAPRAWY 976
Query: 397 SRLDKYLRSKNY 432
S++D + + +
Sbjct: 977 SKIDSFFQGSGF 988
>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1142
Score = 129 bits (325), Expect = 4e-28
Identities = 58/136 (42%), Positives = 93/136 (68%)
Frame = +1
Query: 31 KEKHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLA 210
+++ +IG W+++TK N++ S+ ++K LV KG+ Q+ GI+Y + Y P+A L++ + +A
Sbjct: 672 RDREVIGVKWVYKTKLNLDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIA 731
Query: 211 FITHMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRS 390
++YQ+D+KSAF NG L EEI++E+ EGF G EN ++ LKKALYGL QA R
Sbjct: 732 LAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAPRV 791
Query: 391 WFSRLDKYLRSKNYTQ 438
W+S++DKY K + +
Sbjct: 792 WYSQIDKYFIQKGFAK 807
>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
Length = 1109
Score = 129 bits (325), Expect = 4e-28
Identities = 58/128 (45%), Positives = 89/128 (69%)
Frame = +1
Query: 31 KEKHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLA 210
++K++IG W+FRTK + SI +HK LV KGY Q++G++Y ++P+A+ ++ + LA
Sbjct: 716 EDKNVIGVKWVFRTKYLADGSIQKHKAQLVAKGYAQQHGVDYDDTFSPIALFETVRTLLA 775
Query: 211 FITHMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRS 390
HM+ VYQ D+KSAF NG L EE+++ + EGF G+E +Y LKK L+GL QA R+
Sbjct: 776 LAAHMHWCVYQFDVKSAFLNGELVEEVYVSQPEGFIVPGKEEHVYRLKKTLFGLKQAPRA 835
Query: 391 WFSRLDKY 414
W+S++D Y
Sbjct: 836 WYSKIDSY 843
>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1198
Score = 129 bits (323), Expect = 7e-28
Identities = 58/136 (42%), Positives = 93/136 (68%)
Frame = +1
Query: 31 KEKHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLA 210
+++ +IG W+++TK N + S+ ++K LV KG+ Q+ GI+Y + Y P+A L++ + +A
Sbjct: 745 RDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIA 804
Query: 211 FITHMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRS 390
++YQ+D+KSAF NG L EEI++E+ EGF G EN ++ LKKALYGL QA R+
Sbjct: 805 LAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAPRA 864
Query: 391 WFSRLDKYLRSKNYTQ 438
W+S++DKY K + +
Sbjct: 865 WYSQIDKYFIQKGFAK 880
>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711922|gb|ABF99717.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1335
Score = 129 bits (323), Expect = 7e-28
Identities = 58/136 (42%), Positives = 93/136 (68%)
Frame = +1
Query: 31 KEKHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLA 210
+++ +IG W+++TK N + S+ ++K LV KG+ Q+ GI+Y + Y P+A L++ + +A
Sbjct: 882 RDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIA 941
Query: 211 FITHMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRS 390
++YQ+D+KSAF NG L EEI++E+ EGF G EN ++ LKKALYGL QA R+
Sbjct: 942 LAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAPRA 1001
Query: 391 WFSRLDKYLRSKNYTQ 438
W+S++DKY K + +
Sbjct: 1002 WYSQIDKYFIQKGFAK 1017
>emb|CAN63448.1| hypothetical protein VITISV_008725 [Vitis vinifera]
Length = 969
Score = 127 bits (320), Expect = 2e-27
Identities = 62/139 (44%), Positives = 91/139 (65%), Gaps = 4/139 (2%)
Frame = +1
Query: 37 KHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLAFI 216
K IG W+++TK N + S+N+H LV+KGY Q +G+++ + + P+A L + LA
Sbjct: 566 KKAIGVKWVYKTKLNSDGSVNKHNAKLVVKGYAQMFGVDFLETFAPVARLDTIRMLLALA 625
Query: 217 THMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRSWF 396
M ++YQ+D+KS F NG L EEIF+E+ EGF G+E+ +Y LKKALYGL QA R+W+
Sbjct: 626 AQMGWKIYQLDVKSIFLNGYLEEEIFVEQLEGFVVKGKEDKVYQLKKALYGLKQAPRAWY 685
Query: 397 SRLDKYLRS----KNYTQC 441
SR++ +L S K QC
Sbjct: 686 SRINAHLLSLGFKKRSNQC 704
>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
gi|31429795|gb|AAP51797.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1350
Score = 127 bits (318), Expect = 3e-27
Identities = 57/136 (41%), Positives = 93/136 (68%)
Frame = +1
Query: 31 KEKHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLA 210
+++ +IG W+++TK N + S+ ++K LV KG+ Q+ GI+Y + Y P+A L++ + +A
Sbjct: 805 RDRKVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIA 864
Query: 211 FITHMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRS 390
++YQ+D+KSAF NG L EEI++E+ EGF G EN ++ LKKALYGL QA R+
Sbjct: 865 LAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAPRA 924
Query: 391 WFSRLDKYLRSKNYTQ 438
W+S++D+Y K + +
Sbjct: 925 WYSQIDQYFIQKGFAK 940
>ref|XP_002283141.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
GSO1-like [Vitis vinifera]
Length = 1464
Score = 126 bits (316), Expect = 5e-27
Identities = 59/137 (43%), Positives = 94/137 (68%)
Frame = +1
Query: 28 QKEKHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFL 207
++E +I + + TK N + S+N++K LV+KGY Q +G+++ K + P+A L + L
Sbjct: 56 KEELRMIEKNDTWETKLNADGSVNKYKARLVVKGYSQVFGVDFSKTFAPVACLDTIRMLL 115
Query: 208 AFITHMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALR 387
A T + YQ+D+KS F NG L+EEI++E+ EGF+ G+E +YLLKKALYGL QA R
Sbjct: 116 ALTTQKGWKTYQLDVKSVFLNGYLQEEIYVEQPEGFQVKGQEEKVYLLKKALYGLKQAPR 175
Query: 388 SWFSRLDKYLRSKNYTQ 438
+W+SR+D++L+S + +
Sbjct: 176 AWYSRIDEHLQSHGFVK 192
>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
Length = 1472
Score = 126 bits (316), Expect = 5e-27
Identities = 58/128 (45%), Positives = 87/128 (67%)
Frame = +1
Query: 31 KEKHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLA 210
++K++IG W+FRTK + SI +HK LV KGY Q++G++Y ++P+A ++ + LA
Sbjct: 784 EDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARFETVRTLLA 843
Query: 211 FITHMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRS 390
HM+ YQ D+KSAF NG L EE+++ + EGF +E +Y LKKALYGL QA R+
Sbjct: 844 LAAHMHWCXYQFDVKSAFLNGELVEEVYVSQXEGFIVPXKEEHVYRLKKALYGLKQAPRA 903
Query: 391 WFSRLDKY 414
W+S++D Y
Sbjct: 904 WYSKIDSY 911
>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 125 bits (313), Expect = 1e-26
Identities = 58/128 (45%), Positives = 86/128 (67%)
Frame = +1
Query: 31 KEKHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLA 210
++K++IG W+FRTK + SI +HK LV KGY Q++G++Y ++P+A ++ + LA
Sbjct: 955 EDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARFETVRTLLA 1014
Query: 211 FITHMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRS 390
HM+ VYQ D+KSAF NG L EE++ + EGF +E +Y LK ALYGL QA R+
Sbjct: 1015 LAAHMHWCVYQFDVKSAFLNGELVEEVYXSQPEGFIVPDKEEHVYRLKXALYGLKQAPRA 1074
Query: 391 WFSRLDKY 414
W+S++D Y
Sbjct: 1075 WYSKIDSY 1082
>emb|CAN62530.1| hypothetical protein VITISV_029281 [Vitis vinifera]
Length = 646
Score = 124 bits (310), Expect = 2e-26
Identities = 58/129 (44%), Positives = 87/129 (67%)
Frame = +1
Query: 31 KEKHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLA 210
K IG W++RTK N N S+N+HK LV+KGY Q +G+N+ + + +A L + LA
Sbjct: 399 KRSSAIGVKWVYRTKLNSNGSVNKHKARLVVKGYAQMFGMNFSETFALVARLDTIRMLLA 458
Query: 211 FITHMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRS 390
T ++Y++D+KSAF NG L EEIF+E+ E F G+E+ +Y L+KALYGL QA R+
Sbjct: 459 LPTQKGWKIYRLDVKSAFLNGYLEEEIFVEQPEEFAVKGKEDKVYQLRKALYGLKQAPRA 518
Query: 391 WFSRLDKYL 417
W++R++ +L
Sbjct: 519 WYNRINAHL 527
>gb|ABR16288.1| unknown [Picea sitchensis]
Length = 363
Score = 123 bits (309), Expect = 3e-26
Identities = 56/129 (43%), Positives = 86/129 (66%)
Frame = +1
Query: 31 KEKHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLA 210
KEK I W+++TK N +++HK LV KG+ QEYG++Y + + P+A L + LA
Sbjct: 21 KEKECISVKWVYKTKYKANGELDKHKARLVAKGFAQEYGVDYNETFAPVARLDTIRMVLA 80
Query: 211 FITHMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRS 390
N +VYQMD+KSAF NG L EE+++++ ++ G+E+ +Y LKKAL GL QA R+
Sbjct: 81 IAAQHNWKVYQMDVKSAFLNGYLEEEVYVQQPPRYEVRGQEDKVYRLKKALNGLKQAPRA 140
Query: 391 WFSRLDKYL 417
W+S++D Y+
Sbjct: 141 WYSKIDSYM 149
>emb|CAN69241.1| hypothetical protein VITISV_009386 [Vitis vinifera]
Length = 925
Score = 123 bits (308), Expect = 4e-26
Identities = 60/122 (49%), Positives = 80/122 (65%)
Frame = +1
Query: 37 KHIIGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLAFI 216
K IG W++RTK N + SIN+HK LV+KGY Q +G+++ + + P+A L + LA
Sbjct: 479 KRAIGVKWVYRTKLNSDGSINKHKARLVVKGYAQMFGVDFFETFAPVARLDTIRMLLALA 538
Query: 217 THMNLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRSWF 396
++QMD+KSAF NG L EEIF+E+ EGF G E +YLLKKALYGL QA R W+
Sbjct: 539 AQKGWNIHQMDVKSAFLNGYLEEEIFVEQPEGFIVQGMEEKVYLLKKALYGLKQAPRDWY 598
Query: 397 SR 402
R
Sbjct: 599 RR 600
>gb|AGH20668.1| reverse transcriptase, partial [Arabis hirsuta]
Length = 315
Score = 122 bits (307), Expect = 5e-26
Identities = 56/132 (42%), Positives = 85/132 (64%)
Frame = +1
Query: 46 IGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLAFITHM 225
IG W+++ K N I ++K LV GY Q GI+Y + + P+A L++ +
Sbjct: 40 IGVKWVYQAKKNSKGEIERYKARLVANGYSQRAGIDYDEVFAPVARLETIRLIILLAAQN 99
Query: 226 NLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRSWFSRL 405
N R++QMD+KSAF NG+L EE+++E+ +G+ G EN + LKKALYGL QA R+W +R+
Sbjct: 100 NWRIHQMDVKSAFLNGDLEEEVYIEQPQGYIVEGEENKVLRLKKALYGLKQAPRAWNTRI 159
Query: 406 DKYLRSKNYTQC 441
DKY + KN+ +C
Sbjct: 160 DKYFKEKNFIKC 171
>gb|AGH20669.1| reverse transcriptase, partial [Lepidium sativum]
Length = 315
Score = 122 bits (306), Expect = 7e-26
Identities = 55/132 (41%), Positives = 87/132 (65%)
Frame = +1
Query: 46 IGCHWLFRTKNNINRSINQHKN*LVIKGYMQEYGINYQKNYTPMAILKSFISFLAFITHM 225
IG W+++ K N N I ++K LV KGY Q GI+Y + + P+A L++ ++
Sbjct: 40 IGVKWMYKAKKNANGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQN 99
Query: 226 NLRVYQMDIKSAFFNGNLREEIFLEKSEGFKF*GRENDIYLLKKALYGLNQALRSWFSRL 405
R++QMD+KSAF NG+L EE+++E+ +GF G E+ + LKKALYGL QA R+W +R+
Sbjct: 100 KWRIHQMDVKSAFLNGDLNEEVYIEQPQGFIIKGEEDKVLRLKKALYGLKQAPRAWNTRI 159
Query: 406 DKYLRSKNYTQC 441
+KY + K++ +C
Sbjct: 160 EKYFKEKDFIKC 171