BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00028668
         (1227 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006443008.1| hypothetical protein CICLE_v10020228mg [Citr...   185   3e-44
ref|XP_004136676.1| PREDICTED: uncharacterized protein LOC101208...   185   3e-44
ref|XP_002533362.1| conserved hypothetical protein [Ricinus comm...   184   5e-44
ref|XP_006294449.1| hypothetical protein CARUB_v10023462mg [Caps...   184   8e-44
ref|XP_002879093.1| hypothetical protein ARALYDRAFT_901658 [Arab...   184   8e-44
ref|NP_180415.1| RNA-binding CRS1 / YhbY (CRM) domain protein [A...   184   8e-44
gb|EMJ27685.1| hypothetical protein PRUPE_ppa026631mg, partial [...   183   1e-43
ref|XP_006409872.1| hypothetical protein EUTSA_v10016829mg [Eutr...   183   1e-43
ref|XP_004309840.1| PREDICTED: uncharacterized CRM domain-contai...   182   2e-43
ref|XP_002456961.1| hypothetical protein SORBIDRAFT_03g046420 [S...   182   2e-43
ref|XP_004971323.1| PREDICTED: uncharacterized CRM domain-contai...   182   2e-43
ref|NP_001045453.1| Os01g0958400 [Oryza sativa Japonica Group] g...   180   9e-43
dbj|BAD88160.1| group II intron splicing factor CRS1-like [Oryza...   180   9e-43
dbj|BAD88159.1| group II intron splicing factor CRS1-like [Oryza...   180   9e-43
ref|XP_004969060.1| PREDICTED: uncharacterized CRM domain-contai...   179   2e-42
gb|EOY04851.1| RNA-binding CRS1 / YhbY domain protein [Theobroma...   179   3e-42
ref|NP_001151028.1| CFM6 [Zea mays] gi|195643764|gb|ACG41350.1| ...   178   4e-42
ref|XP_006646700.1| PREDICTED: uncharacterized CRM domain-contai...   177   6e-42
gb|EMT05806.1| Putative CRM domain-containing protein [Aegilops ...   177   6e-42
ref|XP_004246769.1| PREDICTED: uncharacterized CRM domain-contai...   177   6e-42

>ref|XP_006443008.1| hypothetical protein CICLE_v10020228mg [Citrus clementina]
           gi|568849994|ref|XP_006478718.1| PREDICTED:
           uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic-like [Citrus sinensis]
           gi|557545270|gb|ESR56248.1| hypothetical protein
           CICLE_v10020228mg [Citrus clementina]
          Length = 432

 Score =  185 bits (470), Expect = 3e-44
 Identities = 100/223 (44%), Positives = 140/223 (62%), Gaps = 2/223 (0%)
 Frame = -2

Query: 839 RKQCKKVERPFRIYGHVLPRIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTE 660
           R+   K ++  + + +   RIKY++EK K KE  LIE L++YE+ + +    +    LT 
Sbjct: 109 RRLTVKGKKKKQKFANAEDRIKYKLEKAKIKEALLIERLKRYEVPK-VQGPVVKPHELTG 167

Query: 659 EEAFHLKKIGLKAGNYIPVGRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEK 480
           EE F+ KK+  K  NY+P+GR+G+ GGVIL +H HW++ ET +V+CK + P +I E AE+
Sbjct: 168 EERFYFKKMAQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPSKPGQIHEFAEE 227

Query: 479 IAKLSGGIPVH-VDDKRIIVYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHI 306
           IA+LSGGIP+  + D  +I YRGKNYV PE+  P  TLS KKA  +     SL +VR  I
Sbjct: 228 IARLSGGIPIQIIGDDTVIFYRGKNYVQPEIMSPIDTLSKKKALEKSKYEQSLESVRRFI 287

Query: 305 AVLEKELELYYRHTRLYGQPTDEMELDASLNTVSEMETDAPVT 177
           A+ EKELELYYRH  LYG P +        N +S M+  + VT
Sbjct: 288 AMAEKELELYYRHIALYGDPNNR-------NPMSIMDNPSKVT 323


>ref|XP_004136676.1| PREDICTED: uncharacterized protein LOC101208777 [Cucumis sativus]
           gi|449494725|ref|XP_004159629.1| PREDICTED:
           uncharacterized LOC101208777 [Cucumis sativus]
          Length = 431

 Score =  185 bits (470), Expect = 3e-44
 Identities = 107/249 (42%), Positives = 154/249 (61%), Gaps = 4/249 (1%)
 Frame = -2

Query: 845 QWRKQCKKVERPFRIYGHVLPRIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPL 666
           Q R + KK ++    + +   RIK ++E  + KE  LIE LR+YE+ + +    +    L
Sbjct: 114 QLRVKGKKKQK----FPNAAERIKNKLENARIKEALLIERLRRYEVPK-VQGPMVKPHDL 168

Query: 665 TEEEAFHLKKIGLKAGNYIPVGRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHA 486
           T EE F++KK+G K  NY+P+GR+G+ GGVIL +H HW++ ET +VYCK   P ++ E+A
Sbjct: 169 TGEERFYIKKMGQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVYCKPCKPGQVHEYA 228

Query: 485 EKIAKLSGGIPVH-VDDKRIIVYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRC 312
           ++IA+LSGGIP+  + D  II YRGK+YV PEV  P  TLS K+A  +     SL +VR 
Sbjct: 229 QEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRR 288

Query: 311 HIAVLEKELELYYRHTRLYGQPTDEMELDASLNTVSE-METDA-PVTAANDSHNKSHYMS 138
            IA+ EKELELYYRH  LYG P D   L + LN  S+ + +D   +T   DSH+ +  ++
Sbjct: 289 FIAIAEKELELYYRHIALYGDPNDRNPL-SILNVPSDNLNSDKYQITNMEDSHSAALCLA 347

Query: 137 LRKMKRHLP 111
              M +  P
Sbjct: 348 SDVMNQRNP 356


>ref|XP_002533362.1| conserved hypothetical protein [Ricinus communis]
           gi|223526802|gb|EEF29024.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 412

 Score =  184 bits (468), Expect = 5e-44
 Identities = 98/216 (45%), Positives = 136/216 (62%), Gaps = 5/216 (2%)
 Frame = -2

Query: 833 QCKKVERPFRIYGHVLPRIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTEEE 654
           +C  V+R  + + +   RIKY++E+ K KE  L+E L++YE+ + +    +    LT EE
Sbjct: 90  RCLTVKRKKQKFANAEERIKYKLERAKIKEALLVERLKRYEVPK-VQGPEVKPHDLTGEE 148

Query: 653 AFHLKKIGLKAGNYIPVGRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEKIA 474
            F +KK+  K  NY+P+GR+G+ GGVIL +H HW++ ET +V C +  P ++ E+A++IA
Sbjct: 149 RFFMKKMAQKQSNYVPLGRRGVFGGVILNMHMHWKKHETVKVICNFCKPGQVHEYAQEIA 208

Query: 473 KLSGGIPVHV-DDKRIIVYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHIAV 300
           +LSGGIP+ V  D  II YRGKNYV PEV  P  TLS K+A  +     SL +VR  IA+
Sbjct: 209 RLSGGIPIQVIGDDTIIFYRGKNYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAI 268

Query: 299 LEKELELYYRHTRLYGQPTDE---MELDASLNTVSE 201
            EKELELYYRH  LYG P D      LD+  N   E
Sbjct: 269 AEKELELYYRHIALYGDPNDRNLLSVLDSPTNDFKE 304


>ref|XP_006294449.1| hypothetical protein CARUB_v10023462mg [Capsella rubella]
           gi|482563157|gb|EOA27347.1| hypothetical protein
           CARUB_v10023462mg [Capsella rubella]
          Length = 371

 Score =  184 bits (466), Expect = 8e-44
 Identities = 96/212 (45%), Positives = 137/212 (64%), Gaps = 2/212 (0%)
 Frame = -2

Query: 782 RIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTEEEAFHLKKIGLKAGNYIPV 603
           RI Y++EK K KE  L+E L++YE+ + +    +    +T EE F+LKK+G K  NY+P+
Sbjct: 128 RITYKLEKAKIKEALLVEKLKRYEVAK-VQGPEVRPHEITGEERFYLKKMGQKRSNYVPI 186

Query: 602 GRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEKIAKLSGGIPVH-VDDKRII 426
           GR+G+ GGVIL +H HW++ ET +V C  + P ++Q++AE++AKLSGG+PV+ + D  II
Sbjct: 187 GRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGVPVNIIGDDTII 246

Query: 425 VYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHIAVLEKELELYYRHTRLYGQ 249
            YRGK YV P++  P  TLS K+AY R     SL +VR  IA+ EKELELYYRH  LY  
Sbjct: 247 FYRGKGYVQPQIMSPIDTLSKKRAYERSKYEQSLESVRHFIAIAEKELELYYRHVALYDD 306

Query: 248 PTDEMELDASLNTVSEMETDAPVTAANDSHNK 153
           P +        N +S ++ D P  + N  HN+
Sbjct: 307 PNNR-------NPLSILD-DYPSESRNHHHNE 330


>ref|XP_002879093.1| hypothetical protein ARALYDRAFT_901658 [Arabidopsis lyrata subsp.
           lyrata] gi|297324932|gb|EFH55352.1| hypothetical protein
           ARALYDRAFT_901658 [Arabidopsis lyrata subsp. lyrata]
          Length = 345

 Score =  184 bits (466), Expect = 8e-44
 Identities = 94/196 (47%), Positives = 131/196 (66%), Gaps = 2/196 (1%)
 Frame = -2

Query: 782 RIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTEEEAFHLKKIGLKAGNYIPV 603
           RIKY++EK K KE  LIE L++YE+ + +    +    +T EE F+LKK+G K  NY+P+
Sbjct: 124 RIKYKLEKAKIKEALLIEKLKRYEVAK-VQGPEVRPHEITGEERFYLKKMGQKRSNYVPI 182

Query: 602 GRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEKIAKLSGGIPVH-VDDKRII 426
           GR+G+ GGVIL +H HW++ ET +V C  + P ++Q++AE++AKLSGG+PV+ + D  II
Sbjct: 183 GRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGVPVNIIGDDTII 242

Query: 425 VYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHIAVLEKELELYYRHTRLYGQ 249
            YRGK YV P+V  P  TLS K+AY +     SL +VR  IA+ EKELELYYRH  LY  
Sbjct: 243 FYRGKGYVQPQVMSPIDTLSKKRAYEKSKYEQSLESVRHSIAIAEKELELYYRHVALYDD 302

Query: 248 PTDEMELDASLNTVSE 201
           P +   L    ++ SE
Sbjct: 303 PNNRNPLSILDDSPSE 318


>ref|NP_180415.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
           gi|4510396|gb|AAD21483.1| hypothetical protein
           [Arabidopsis thaliana] gi|44917583|gb|AAS49116.1|
           At2g28480 [Arabidopsis thaliana]
           gi|110741747|dbj|BAE98819.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253035|gb|AEC08129.1|
           RNA-binding CRS1 / YhbY (CRM) domain protein
           [Arabidopsis thaliana]
          Length = 372

 Score =  184 bits (466), Expect = 8e-44
 Identities = 94/196 (47%), Positives = 131/196 (66%), Gaps = 2/196 (1%)
 Frame = -2

Query: 782 RIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTEEEAFHLKKIGLKAGNYIPV 603
           RIKY++EK K KE  LIE L++YE+ + +    +    +T EE F+LKK+G K  NY+P+
Sbjct: 127 RIKYKLEKAKIKEALLIERLKRYEVAK-VQGPEVRPHEITGEERFYLKKMGQKRSNYVPI 185

Query: 602 GRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEKIAKLSGGIPVH-VDDKRII 426
           GR+G+ GGVIL +H HW++ ET +V C  + P ++Q++AE++AKLSGG+PV+ + D  II
Sbjct: 186 GRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGVPVNIIGDDTII 245

Query: 425 VYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHIAVLEKELELYYRHTRLYGQ 249
            YRGK YV P+V  P  TLS K+AY +     SL +VR  IA+ EKELELYYRH  LY  
Sbjct: 246 FYRGKGYVQPQVMSPIDTLSKKRAYEKSKYEQSLESVRHFIAIAEKELELYYRHVALYDD 305

Query: 248 PTDEMELDASLNTVSE 201
           P +   L    ++ SE
Sbjct: 306 PNNRNPLSILDDSPSE 321


>gb|EMJ27685.1| hypothetical protein PRUPE_ppa026631mg, partial [Prunus persica]
          Length = 371

 Score =  183 bits (465), Expect = 1e-43
 Identities = 94/187 (50%), Positives = 126/187 (67%), Gaps = 2/187 (1%)
 Frame = -2

Query: 782 RIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTEEEAFHLKKIGLKAGNYIPV 603
           RIKY++EK + KE  LIE L++YE+ + +    +  + LT EE F++KK+  K  NY P+
Sbjct: 103 RIKYKLEKARIKEALLIERLKRYEVPK-VQGPEVKPDDLTGEERFYMKKMAQKKSNYAPI 161

Query: 602 GRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEKIAKLSGGIPVH-VDDKRII 426
           G++GI GGVIL +H HW++ ET +V CK   P ++ E+A++IA+LSGGIP+  V D  I+
Sbjct: 162 GKRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHEYAQEIARLSGGIPIQIVGDDTIV 221

Query: 425 VYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHIAVLEKELELYYRHTRLYGQ 249
            YRGKNYV P+V  P  TLS KKA  +F    SL +VR  IA+ EKELELYYRH  LYG 
Sbjct: 222 FYRGKNYVQPKVMSPVNTLSKKKALEKFKYEQSLESVRHFIAIAEKELELYYRHIALYGD 281

Query: 248 PTDEMEL 228
           P D   L
Sbjct: 282 PNDRNPL 288


>ref|XP_006409872.1| hypothetical protein EUTSA_v10016829mg [Eutrema salsugineum]
           gi|557111041|gb|ESQ51325.1| hypothetical protein
           EUTSA_v10016829mg [Eutrema salsugineum]
          Length = 367

 Score =  183 bits (464), Expect = 1e-43
 Identities = 95/214 (44%), Positives = 137/214 (64%), Gaps = 2/214 (0%)
 Frame = -2

Query: 782 RIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTEEEAFHLKKIGLKAGNYIPV 603
           R+K+++EK K KE  LIE L++YE+ + +    +    +T EE F+LKK+G K  NY+P+
Sbjct: 126 RLKHKLEKAKIKEALLIEKLKRYEVAK-VQGPEVQPHEITGEERFYLKKMGQKRSNYVPI 184

Query: 602 GRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEKIAKLSGGIPVH-VDDKRII 426
           GR+G+ GGVIL +H HW++ ET +V C  + P ++Q++AE++AKLSGG+PV+ + D  II
Sbjct: 185 GRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGVPVNIIGDDTII 244

Query: 425 VYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHIAVLEKELELYYRHTRLYGQ 249
            YRGK YV P+V  P  TLS K+AY +     SL +VR  IA+ EKELELYYRH  LY  
Sbjct: 245 FYRGKGYVQPQVMSPIDTLSKKRAYEKSKYEQSLESVRHFIAISEKELELYYRHVALYDD 304

Query: 248 PTDEMELDASLNTVSEMETDAPVTAANDSHNKSH 147
           P++   L         +  D+P  + N   N+ H
Sbjct: 305 PSNRNPL--------SILNDSPAESRNHRWNELH 330


>ref|XP_004309840.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 402

 Score =  182 bits (463), Expect = 2e-43
 Identities = 97/199 (48%), Positives = 127/199 (63%), Gaps = 2/199 (1%)
 Frame = -2

Query: 782 RIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTEEEAFHLKKIGLKAGNYIPV 603
           +IKY++EK + KE  LIE L++YEI + +    +    LT EE F++KK+  K  NY P+
Sbjct: 162 KIKYKLEKARIKEALLIERLKRYEIPK-VQGPVVQPNYLTGEERFYVKKMAQKKSNYAPI 220

Query: 602 GRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEKIAKLSGGIPVH-VDDKRII 426
           GR+GI GGVIL +H HW++ ET +V CK   P ++ E A++IA+LSGG P+  V D  II
Sbjct: 221 GRRGIFGGVILNMHMHWKKHETVKVICKLCKPGQVHEFAQEIARLSGGTPIQIVGDDTII 280

Query: 425 VYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHIAVLEKELELYYRHTRLYGQ 249
            YRGKNYV PEV  P  TLS K+A  +     SL +VR  IA+ EKELELYYRH  LYG 
Sbjct: 281 FYRGKNYVQPEVMSPVDTLSKKRALEKSKYEQSLESVRNFIAIAEKELELYYRHNALYGD 340

Query: 248 PTDEMELDASLNTVSEMET 192
           P DE  +       +E ET
Sbjct: 341 PNDEKSISVLDGPTNETET 359


>ref|XP_002456961.1| hypothetical protein SORBIDRAFT_03g046420 [Sorghum bicolor]
           gi|241928936|gb|EES02081.1| hypothetical protein
           SORBIDRAFT_03g046420 [Sorghum bicolor]
          Length = 405

 Score =  182 bits (463), Expect = 2e-43
 Identities = 97/184 (52%), Positives = 125/184 (67%), Gaps = 2/184 (1%)
 Frame = -2

Query: 782 RIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTEEEAFHLKKIGLKAGNYIPV 603
           R+KY+IEK K KE  L+E L+KYE+ ++    A   + L+ EE F+LKK+  K  NY+PV
Sbjct: 136 RLKYKIEKAKLKEVRLVEKLKKYEVAKAQGPMA-KPDDLSGEERFYLKKVSQKKSNYVPV 194

Query: 602 GRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEKIAKLSGGIPVH-VDDKRII 426
           GR+G+ GGVIL +H HW++ ET +V CK   P +IQE+A +IA+LSGGIPV+ + D  I+
Sbjct: 195 GRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYANEIARLSGGIPVNIIGDDTIV 254

Query: 425 VYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHIAVLEKELELYYRHTRLYGQ 249
            YRGKNYV PEV  P  TLS KKA  +     SL  VR  IA+ EKELELYYRH  LYG 
Sbjct: 255 FYRGKNYVQPEVMSPIDTLSKKKALEKSKYEQSLETVRRFIAISEKELELYYRHVALYGN 314

Query: 248 PTDE 237
           P  +
Sbjct: 315 PQSQ 318


>ref|XP_004971323.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic-like [Setaria italica]
          Length = 400

 Score =  182 bits (462), Expect = 2e-43
 Identities = 101/203 (49%), Positives = 133/203 (65%), Gaps = 2/203 (0%)
 Frame = -2

Query: 839 RKQCKKVERPFRIYGHVLPRIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTE 660
           R + KK+++ F        R+KY+I+K K KE  L+E L+KYE+ ++    A   + L+ 
Sbjct: 120 RPKGKKIKQKFPT---AEARLKYKIDKAKLKEAMLVEKLKKYEVAKAQGPMA-KPDDLSG 175

Query: 659 EEAFHLKKIGLKAGNYIPVGRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEK 480
           EE F+LKK+  K  NY+PVGR+G+ GGVIL +H HW++ ET +V CK   P +IQE+A +
Sbjct: 176 EERFYLKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYANE 235

Query: 479 IAKLSGGIPVH-VDDKRIIVYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHI 306
           IA+LSGGIPV+ + D  I+ YRGKNYV PEV  P  TLS KKA  +     SL  VR  I
Sbjct: 236 IARLSGGIPVNIIGDDTIVFYRGKNYVQPEVMSPVDTLSKKKALEKSKYEQSLETVRRFI 295

Query: 305 AVLEKELELYYRHTRLYGQPTDE 237
           AV EKELELYYRH  LYG P  +
Sbjct: 296 AVSEKELELYYRHVALYGIPQSQ 318


>ref|NP_001045453.1| Os01g0958400 [Oryza sativa Japonica Group]
           gi|57900096|dbj|BAD88158.1| group II intron splicing
           factor CRS1-like [Oryza sativa Japonica Group]
           gi|57900276|dbj|BAD87109.1| group II intron splicing
           factor CRS1-like [Oryza sativa Japonica Group]
           gi|113534984|dbj|BAF07367.1| Os01g0958400 [Oryza sativa
           Japonica Group] gi|215768161|dbj|BAH00390.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218189771|gb|EEC72198.1| hypothetical protein
           OsI_05277 [Oryza sativa Indica Group]
           gi|222619906|gb|EEE56038.1| hypothetical protein
           OsJ_04827 [Oryza sativa Japonica Group]
          Length = 415

 Score =  180 bits (457), Expect = 9e-43
 Identities = 96/184 (52%), Positives = 124/184 (67%), Gaps = 2/184 (1%)
 Frame = -2

Query: 782 RIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTEEEAFHLKKIGLKAGNYIPV 603
           R+KY+IEK K KE  L+E L+KYEI ++    A   + L  EE F+LKK+  K  NY+PV
Sbjct: 135 RLKYKIEKAKLKEAMLVEKLKKYEIAKAQGPMA-KQDDLDGEERFYLKKVSQKKSNYVPV 193

Query: 602 GRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEKIAKLSGGIPVH-VDDKRII 426
           GR+G+ GGVIL +H HW++ ET +V CK   P +IQE+A +IA+LSGGIP++ + +  I+
Sbjct: 194 GRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGGIPINTIGNDTIV 253

Query: 425 VYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHIAVLEKELELYYRHTRLYGQ 249
            YRGKNYV P+V  P  TLS KKA  +     SL  VR  IAV EKELELYYRH  LYG 
Sbjct: 254 FYRGKNYVQPDVMSPVDTLSKKKALEKSKYEQSLETVRRFIAVSEKELELYYRHIALYGN 313

Query: 248 PTDE 237
           P  +
Sbjct: 314 PQSQ 317


>dbj|BAD88160.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
           Group] gi|57900278|dbj|BAD87111.1| group II intron
           splicing factor CRS1-like [Oryza sativa Japonica Group]
          Length = 394

 Score =  180 bits (457), Expect = 9e-43
 Identities = 96/184 (52%), Positives = 124/184 (67%), Gaps = 2/184 (1%)
 Frame = -2

Query: 782 RIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTEEEAFHLKKIGLKAGNYIPV 603
           R+KY+IEK K KE  L+E L+KYEI ++    A   + L  EE F+LKK+  K  NY+PV
Sbjct: 135 RLKYKIEKAKLKEAMLVEKLKKYEIAKAQGPMA-KQDDLDGEERFYLKKVSQKKSNYVPV 193

Query: 602 GRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEKIAKLSGGIPVH-VDDKRII 426
           GR+G+ GGVIL +H HW++ ET +V CK   P +IQE+A +IA+LSGGIP++ + +  I+
Sbjct: 194 GRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGGIPINTIGNDTIV 253

Query: 425 VYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHIAVLEKELELYYRHTRLYGQ 249
            YRGKNYV P+V  P  TLS KKA  +     SL  VR  IAV EKELELYYRH  LYG 
Sbjct: 254 FYRGKNYVQPDVMSPVDTLSKKKALEKSKYEQSLETVRRFIAVSEKELELYYRHIALYGN 313

Query: 248 PTDE 237
           P  +
Sbjct: 314 PQSQ 317


>dbj|BAD88159.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
           Group] gi|57900277|dbj|BAD87110.1| group II intron
           splicing factor CRS1-like [Oryza sativa Japonica Group]
           gi|215695021|dbj|BAG90212.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 417

 Score =  180 bits (457), Expect = 9e-43
 Identities = 96/184 (52%), Positives = 124/184 (67%), Gaps = 2/184 (1%)
 Frame = -2

Query: 782 RIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTEEEAFHLKKIGLKAGNYIPV 603
           R+KY+IEK K KE  L+E L+KYEI ++    A   + L  EE F+LKK+  K  NY+PV
Sbjct: 135 RLKYKIEKAKLKEAMLVEKLKKYEIAKAQGPMA-KQDDLDGEERFYLKKVSQKKSNYVPV 193

Query: 602 GRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEKIAKLSGGIPVH-VDDKRII 426
           GR+G+ GGVIL +H HW++ ET +V CK   P +IQE+A +IA+LSGGIP++ + +  I+
Sbjct: 194 GRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGGIPINTIGNDTIV 253

Query: 425 VYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHIAVLEKELELYYRHTRLYGQ 249
            YRGKNYV P+V  P  TLS KKA  +     SL  VR  IAV EKELELYYRH  LYG 
Sbjct: 254 FYRGKNYVQPDVMSPVDTLSKKKALEKSKYEQSLETVRRFIAVSEKELELYYRHIALYGN 313

Query: 248 PTDE 237
           P  +
Sbjct: 314 PQSQ 317


>ref|XP_004969060.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic-like [Setaria italica]
          Length = 402

 Score =  179 bits (454), Expect = 2e-42
 Identities = 99/203 (48%), Positives = 132/203 (65%), Gaps = 2/203 (0%)
 Frame = -2

Query: 839 RKQCKKVERPFRIYGHVLPRIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTE 660
           R + KK+++ F        R++Y+IEK + KE  LIE L+KYE+  +    +   + L+ 
Sbjct: 120 RPKGKKIKQKFST---AEARLRYKIEKARLKEAMLIEKLKKYEVARAQGPMSKLDD-LSS 175

Query: 659 EEAFHLKKIGLKAGNYIPVGRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEK 480
           EE F+LKK+  K  NY+PVGR+G+ GGVIL +H HW++ ET +V CK   P +IQE+A +
Sbjct: 176 EERFYLKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYANE 235

Query: 479 IAKLSGGIPVH-VDDKRIIVYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHI 306
           IA+LSGGIPV+ + D  I+ YRGKNYV PEV  P  TLS KKA  +     SL  V+  I
Sbjct: 236 IARLSGGIPVNIIGDDTIVFYRGKNYVQPEVMSPVDTLSKKKALEKSKYEQSLETVQRFI 295

Query: 305 AVLEKELELYYRHTRLYGQPTDE 237
           AV EKELELYYRH  LYG P  +
Sbjct: 296 AVSEKELELYYRHVALYGIPQSQ 318


>gb|EOY04851.1| RNA-binding CRS1 / YhbY domain protein [Theobroma cacao]
          Length = 450

 Score =  179 bits (453), Expect = 3e-42
 Identities = 92/183 (50%), Positives = 124/183 (67%), Gaps = 2/183 (1%)
 Frame = -2

Query: 782 RIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTEEEAFHLKKIGLKAGNYIPV 603
           RIKY++EK K KE  L+E L++YE+ ++     +    LT EE F+++K+  K  NY+PV
Sbjct: 182 RIKYKLEKAKIKEALLLERLKRYEVPKAQ-GPVVEPHHLTGEEQFYMRKMAQKRSNYVPV 240

Query: 602 GRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEKIAKLSGGIPVH-VDDKRII 426
           GR+GI GGVIL +H HW++ ET +V CK   P ++ E+A++IA+LSGGIPV  + D  I+
Sbjct: 241 GRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHEYADEIARLSGGIPVQIIGDDTIV 300

Query: 425 VYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHIAVLEKELELYYRHTRLYGQ 249
            YRGKNYV PEV  P  TLS K+A  +     SL +VR  IA+ EKELELYYRH  LYG 
Sbjct: 301 FYRGKNYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRHFIAIAEKELELYYRHIALYGD 360

Query: 248 PTD 240
           P +
Sbjct: 361 PNN 363


>ref|NP_001151028.1| CFM6 [Zea mays] gi|195643764|gb|ACG41350.1| CFM6 [Zea mays]
           gi|238011754|gb|ACR36912.1| unknown [Zea mays]
          Length = 394

 Score =  178 bits (452), Expect = 4e-42
 Identities = 97/179 (54%), Positives = 123/179 (68%), Gaps = 2/179 (1%)
 Frame = -2

Query: 782 RIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTEEEAFHLKKIGLKAGNYIPV 603
           R+KY+IEK K KE  L+E L+KYEI ++    A   + L+ EE F+LKK+  K  NY+PV
Sbjct: 136 RLKYKIEKAKLKEARLVEKLKKYEIAKAQGPMAKVDD-LSGEERFYLKKVSQKKSNYVPV 194

Query: 602 GRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEKIAKLSGGIPVHV-DDKRII 426
           GR+G+ GGVIL +H HW++ ET +V CK   P +IQE+A +IA+LSGGIPV+V  D  I+
Sbjct: 195 GRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYANEIARLSGGIPVNVIGDDTIV 254

Query: 425 VYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHIAVLEKELELYYRHTRLYG 252
            YRGK+YV PEV  P  TLS KKA  +     SL  VR  IA+ EKELELYYRH  LYG
Sbjct: 255 FYRGKSYVQPEVMSPVDTLSKKKALEKSKYEQSLETVRRFIAISEKELELYYRHVALYG 313


>ref|XP_006646700.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic-like [Oryza brachyantha]
          Length = 439

 Score =  177 bits (450), Expect = 6e-42
 Identities = 93/181 (51%), Positives = 123/181 (67%), Gaps = 2/181 (1%)
 Frame = -2

Query: 782 RIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTEEEAFHLKKIGLKAGNYIPV 603
           R++Y+IEK K KE  L+E L+KYE+ ++    A   + L  EE F+LKK+  K  NY+PV
Sbjct: 179 RLRYKIEKAKLKEAMLVEKLKKYEVAKAQGPMA-KQDDLDGEERFYLKKVSQKKSNYVPV 237

Query: 602 GRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEKIAKLSGGIPVHV-DDKRII 426
           GR+G+ GGVIL +H HW++ ET +V CK   P +IQE+A +IA+LSGGIP++V  +  I+
Sbjct: 238 GRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGGIPINVIGNDTIV 297

Query: 425 VYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHIAVLEKELELYYRHTRLYGQ 249
            YRG+NYV P+V  P  TLS KKA  +     SL  VR  IA+ EKELELYYRH  LYG 
Sbjct: 298 FYRGRNYVQPDVMSPVDTLSKKKALEKSKYEQSLETVRRFIAISEKELELYYRHVALYGN 357

Query: 248 P 246
           P
Sbjct: 358 P 358


>gb|EMT05806.1| Putative CRM domain-containing protein [Aegilops tauschii]
          Length = 393

 Score =  177 bits (450), Expect = 6e-42
 Identities = 92/181 (50%), Positives = 124/181 (68%), Gaps = 2/181 (1%)
 Frame = -2

Query: 782 RIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTEEEAFHLKKIGLKAGNYIPV 603
           R+KY+IEK K KE  L+E L++YE+ ++    A   + L  EE F+LKK+  K  NY+P+
Sbjct: 137 RLKYKIEKSKLKEAMLVEKLKRYEVAKAEGPVA-KPDDLDGEERFYLKKVSQKKSNYVPI 195

Query: 602 GRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEKIAKLSGGIPVHV-DDKRII 426
           GR+G+ GGVIL +H HW++ ET +V CK   P +IQE+A +IA+LSGG+P++V  +  I+
Sbjct: 196 GRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYANEIARLSGGVPINVIGNDTIV 255

Query: 425 VYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHIAVLEKELELYYRHTRLYGQ 249
            YRGK+YV PEV  P  TLS KKA  +     SL  VR  IA+ EKELELYYRH  LYG+
Sbjct: 256 FYRGKDYVQPEVMSPIDTLSKKKALEKSKYEQSLETVRRFIAISEKELELYYRHVALYGK 315

Query: 248 P 246
           P
Sbjct: 316 P 316


>ref|XP_004246769.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic-like isoform 1 [Solanum lycopersicum]
           gi|460402540|ref|XP_004246770.1| PREDICTED:
           uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic-like isoform 2 [Solanum lycopersicum]
          Length = 366

 Score =  177 bits (450), Expect = 6e-42
 Identities = 100/221 (45%), Positives = 142/221 (64%), Gaps = 5/221 (2%)
 Frame = -2

Query: 782 RIKYRIEKMKQKETFLIEALRKYEIMESICATAITSEPLTEEEAFHLKKIGLKAGNYIPV 603
           RIK +IE  K KE  LIE L++YE+ + +    +    LT EE F++KK+G K  NY+P+
Sbjct: 137 RIKQKIENAKVKEALLIERLKRYEVTK-VQGPEVKPHFLTGEERFYIKKMGQKRSNYVPI 195

Query: 602 GRQGIIGGVILCLHQHWQRFETAQVYCKYNTPDEIQEHAEKIAKLSGGIPVH-VDDKRII 426
           GR+G+ GGVIL +H HW++ ET +V CK   P ++QE+A++IA+LSGGIP+  + D  I+
Sbjct: 196 GRRGVFGGVILNMHLHWKKHETVKVICK---PGQVQEYADEIARLSGGIPIQIIADDTIV 252

Query: 425 VYRGKNYVPPEVKKP-KTLSWKKAYVRFNLTCSLRNVRCHIAVLEKELELYYRHTRLYGQ 249
            YRG++YV PE+  P  TLS KKA  +     SL +VR  IA+ EKELELYYRH  LYG 
Sbjct: 253 FYRGRDYVQPEIMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGD 312

Query: 248 PTDEME---LDASLNTVSEMETDAPVTAANDSHNKSHYMSL 135
           P++      LD S +T    + +A +   N S +KS+ + L
Sbjct: 313 PSNRSAYSILDDSRST--RGKRNAEIGEENYSASKSNMLDL 351