BLASTX nr result

ID: Ephedra27_contig00028578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00028578
         (496 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006576583.1| PREDICTED: pentatricopeptide repeat-containi...   101   1e-19
ref|XP_006576582.1| PREDICTED: pentatricopeptide repeat-containi...   101   1e-19
ref|XP_006576581.1| PREDICTED: pentatricopeptide repeat-containi...   101   1e-19
ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citr...   100   2e-19
ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata] g...   100   2e-19
ref|NP_567948.1| pentatricopeptide repeat-containing protein [Ar...   100   3e-19
ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   100   3e-19
ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
ref|XP_001761392.1| predicted protein [Physcomitrella patens] gi...   100   3e-19
gb|AFW62799.1| putative pentatricopeptide repeat family protein ...    99   5e-19
emb|CBI25078.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_004298334.1| PREDICTED: putative pentatricopeptide repeat...    99   6e-19
gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygr...    99   6e-19
ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containi...    99   8e-19
ref|XP_004298471.1| PREDICTED: pentatricopeptide repeat-containi...    99   8e-19
ref|XP_004250455.1| PREDICTED: pentatricopeptide repeat-containi...    99   8e-19
ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi...    99   8e-19
gb|EXC24155.1| hypothetical protein L484_015170 [Morus notabilis]      98   1e-18
ref|XP_006663835.1| PREDICTED: pentatricopeptide repeat-containi...    98   1e-18

>ref|XP_006576583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like isoform X3 [Glycine max]
          Length = 652

 Score =  101 bits (251), Expect = 1e-19
 Identities = 43/86 (50%), Positives = 62/86 (72%)
 Frame = +1

Query: 58  NLTVRTDDSVQMKQHSYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKAT 237
           ++ +  DD+++ K   YHSE++  A  L+  P+ + I V KNLRVCSDCH  ++F+SK T
Sbjct: 567 SVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVT 626

Query: 238 KRKIILRDIRRYHHFENGTCSCGGFW 315
           +R II+RDI R+HHF NG+CSCG +W
Sbjct: 627 ERNIIVRDISRFHHFSNGSCSCGDYW 652


>ref|XP_006576582.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like isoform X2 [Glycine max]
          Length = 690

 Score =  101 bits (251), Expect = 1e-19
 Identities = 43/86 (50%), Positives = 62/86 (72%)
 Frame = +1

Query: 58  NLTVRTDDSVQMKQHSYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKAT 237
           ++ +  DD+++ K   YHSE++  A  L+  P+ + I V KNLRVCSDCH  ++F+SK T
Sbjct: 605 SVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVT 664

Query: 238 KRKIILRDIRRYHHFENGTCSCGGFW 315
           +R II+RDI R+HHF NG+CSCG +W
Sbjct: 665 ERNIIVRDISRFHHFSNGSCSCGDYW 690


>ref|XP_006576581.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like isoform X1 [Glycine max]
          Length = 698

 Score =  101 bits (251), Expect = 1e-19
 Identities = 43/86 (50%), Positives = 62/86 (72%)
 Frame = +1

Query: 58  NLTVRTDDSVQMKQHSYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKAT 237
           ++ +  DD+++ K   YHSE++  A  L+  P+ + I V KNLRVCSDCH  ++F+SK T
Sbjct: 613 SVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVT 672

Query: 238 KRKIILRDIRRYHHFENGTCSCGGFW 315
           +R II+RDI R+HHF NG+CSCG +W
Sbjct: 673 ERNIIVRDISRFHHFSNGSCSCGDYW 698


>ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Citrus sinensis]
          Length = 882

 Score =  100 bits (250), Expect = 2e-19
 Identities = 42/69 (60%), Positives = 54/69 (78%)
 Frame = +1

Query: 109  HSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHFEN 288
            HSE+L  A  ++NTP    IRV KNLRVC+DCH+  +F+SK   R+IILRD+RR+HHF+N
Sbjct: 814  HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873

Query: 289  GTCSCGGFW 315
            GTCSCG +W
Sbjct: 874  GTCSCGDYW 882


>ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citrus clementina]
            gi|557551206|gb|ESR61835.1| hypothetical protein
            CICLE_v10014221mg [Citrus clementina]
          Length = 882

 Score =  100 bits (250), Expect = 2e-19
 Identities = 42/69 (60%), Positives = 54/69 (78%)
 Frame = +1

Query: 109  HSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHFEN 288
            HSE+L  A  ++NTP    IRV KNLRVC+DCH+  +F+SK   R+IILRD+RR+HHF+N
Sbjct: 814  HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873

Query: 289  GTCSCGGFW 315
            GTCSCG +W
Sbjct: 874  GTCSCGDYW 882


>ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
           gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 824

 Score =  100 bits (250), Expect = 2e-19
 Identities = 41/69 (59%), Positives = 53/69 (76%)
 Frame = +1

Query: 109 HSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHFEN 288
           HSE+L  A  LI TP++  IR+FKNLRVC DCH   +F+SK T+R+II+RD  R+HHF+N
Sbjct: 756 HSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKN 815

Query: 289 GTCSCGGFW 315
           G CSCG +W
Sbjct: 816 GVCSCGDYW 824


>ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635622|sp|O81767.2|PP348_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
           gi|332660906|gb|AEE86306.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  100 bits (248), Expect = 3e-19
 Identities = 41/69 (59%), Positives = 53/69 (76%)
 Frame = +1

Query: 109 HSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHFEN 288
           HSE+L  A  LI TP++  IR+FKNLRVC DCH   +F+SK T+R+II+RD  R+HHF+N
Sbjct: 755 HSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKN 814

Query: 289 GTCSCGGFW 315
           G CSCG +W
Sbjct: 815 GVCSCGDYW 823


>ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 42/70 (60%), Positives = 52/70 (74%)
 Frame = +1

Query: 106  YHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHFE 285
            YHSE+L  A  LI+TP    IRV KNLRVC DCH  ++ +SK T+R+I+LRD  R+HHF 
Sbjct: 1504 YHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFR 1563

Query: 286  NGTCSCGGFW 315
            NGTCSCG +W
Sbjct: 1564 NGTCSCGDYW 1573


>ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 42/70 (60%), Positives = 52/70 (74%)
 Frame = +1

Query: 106  YHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHFE 285
            YHSE+L  A  LI+TP    IRV KNLRVC DCH  ++ +SK T+R+I+LRD  R+HHF 
Sbjct: 1504 YHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFR 1563

Query: 286  NGTCSCGGFW 315
            NGTCSCG +W
Sbjct: 1564 NGTCSCGDYW 1573


>ref|XP_001761392.1| predicted protein [Physcomitrella patens] gi|162687398|gb|EDQ73781.1|
            predicted protein [Physcomitrella patens]
          Length = 833

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
 Frame = +1

Query: 46   YIHVNLTVRTDDSVQMKQH--SYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFME 219
            YI +   V  D   Q K+   SYHSE+L  A  +++ PS   IR++KNLRVCSDCH   +
Sbjct: 742  YIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASK 801

Query: 220  FVSKATKRKIILRDIRRYHHFENGTCSCGGFW 315
            F+SK T R+II RD  R+HHF++G CSCG +W
Sbjct: 802  FISKVTGREIIARDASRFHHFKDGVCSCGDYW 833


>gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 42/71 (59%), Positives = 53/71 (74%)
 Frame = +1

Query: 103  SYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHF 282
            S+HSE+L  A  LI+TPS   IRV KNLR+C DCH   +++SK   R+II+RDI R+HHF
Sbjct: 812  SHHSERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHF 871

Query: 283  ENGTCSCGGFW 315
             NGTCSCG +W
Sbjct: 872  TNGTCSCGDYW 882


>emb|CBI25078.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
 Frame = +1

Query: 28  WN*KVLYIHVNLTVRTDDSVQMKQH--SYHSEQLVTALVLINTPSEVAIRVFKNLRVCSD 201
           WN  + Y    L    +D    K+H  + HSE+L  A  +I+TP + AIR+FKNLRVC D
Sbjct: 400 WNAIISYYSFVLQDVEEDE---KEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGD 456

Query: 202 CHRFMEFVSKATKRKIILRDIRRYHHFENGTCSCGGFW 315
           CH   +F+S+ T+R+I++RD +R+HHF+NG CSCG +W
Sbjct: 457 CHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 494


>ref|XP_004298334.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Fragaria vesca subsp. vesca]
          Length = 743

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 45/80 (56%), Positives = 58/80 (72%)
 Frame = +1

Query: 76  DDSVQMKQHSYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIIL 255
           D+  +MK  +YHSE+L  A  LI  PS + IRV KNLRVC DCH   +++SK TKR+I++
Sbjct: 664 DELQKMKMLNYHSERLAIAFGLIFIPSGLPIRVVKNLRVCGDCHNATKYISKITKREILV 723

Query: 256 RDIRRYHHFENGTCSCGGFW 315
           RD  RYH F++GTCSCG FW
Sbjct: 724 RDAVRYHLFKDGTCSCGDFW 743


>gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 47/92 (51%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
 Frame = +1

Query: 46   YIHVNLTVRTDDSVQMKQH--SYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFME 219
            YI V   V  +   Q K+   SYHSE+L  A  +++ PS   IR+FKNLRVC DCH   +
Sbjct: 746  YIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASK 805

Query: 220  FVSKATKRKIILRDIRRYHHFENGTCSCGGFW 315
            F+SK T R+II RD  R+HHF+NG CSCG +W
Sbjct: 806  FISKVTGREIIARDASRFHHFKNGVCSCGDYW 837


>ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Solanum tuberosum]
          Length = 889

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 40/69 (57%), Positives = 52/69 (75%)
 Frame = +1

Query: 109  HSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHFEN 288
            HSE+L  A  ++NTP    IR+ KNLRVC+DCH   +F+SK   R+II+RD+RR+HHF N
Sbjct: 821  HSEKLAIAFGILNTPPGTPIRIAKNLRVCNDCHEATKFISKIVNREIIVRDVRRFHHFRN 880

Query: 289  GTCSCGGFW 315
            GTCSCG +W
Sbjct: 881  GTCSCGDYW 889


>ref|XP_004298471.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 614

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 43/71 (60%), Positives = 53/71 (74%)
 Frame = +1

Query: 103 SYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHF 282
           S+HSE+L  A  L++   E +IRV KNLR+C DCH F +FVSKATKR+II+RD  R+HHF
Sbjct: 544 SHHSEKLAIAFSLLSLQPECSIRVVKNLRICDDCHSFCKFVSKATKREIIMRDKIRFHHF 603

Query: 283 ENGTCSCGGFW 315
            NG CSC  FW
Sbjct: 604 RNGECSCNNFW 614


>ref|XP_004250455.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Solanum lycopersicum]
          Length = 653

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 42/80 (52%), Positives = 55/80 (68%)
 Frame = +1

Query: 76  DDSVQMKQHSYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIIL 255
           D   + ++  YHSE+L  A  L+N+PS   IR+ KN+RVC DCH   +FVSK   R+IIL
Sbjct: 574 DQQEREERLQYHSERLALAFALLNSPSGSPIRIKKNIRVCGDCHTAFKFVSKVVDREIIL 633

Query: 256 RDIRRYHHFENGTCSCGGFW 315
           RD  R+HHF NG+CSCG +W
Sbjct: 634 RDTNRFHHFRNGSCSCGDYW 653


>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Vitis vinifera]
          Length = 848

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 41/76 (53%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = +1

Query: 94   KQH--SYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIR 267
            K+H  + HSE+L  A  +I+TP + AIR+FKNLRVC DCH   +F+S+ T+R+I++RD +
Sbjct: 773  KEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSK 832

Query: 268  RYHHFENGTCSCGGFW 315
            R+HHF+NG CSCG +W
Sbjct: 833  RFHHFKNGICSCGDYW 848


>gb|EXC24155.1| hypothetical protein L484_015170 [Morus notabilis]
          Length = 602

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 42/83 (50%), Positives = 59/83 (71%)
 Frame = +1

Query: 67  VRTDDSVQMKQHSYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRK 246
           ++ D+  +     YHSE++  A  LI+T  E  +R+ KNLR+C DCH F++FVSK  KRK
Sbjct: 520 LKIDEEEKQTILHYHSEKIAIAFGLISTGPETPLRIVKNLRICEDCHAFIKFVSKIYKRK 579

Query: 247 IILRDIRRYHHFENGTCSCGGFW 315
           II+RD +R+HHFE+GTCSC  +W
Sbjct: 580 IIVRDRKRFHHFEHGTCSCMDYW 602


>ref|XP_006663835.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Oryza brachyantha]
          Length = 630

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 44/83 (53%), Positives = 59/83 (71%)
 Frame = +1

Query: 67  VRTDDSVQMKQHSYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRK 246
           V TD   ++ +   HSE+L  A  LI+ P  V I ++KNLR+C DCH FM+ VS  T+RK
Sbjct: 550 VHTDQKEELLKD--HSEKLAFAFGLISLPPNVPITIYKNLRICGDCHSFMKIVSCITERK 607

Query: 247 IILRDIRRYHHFENGTCSCGGFW 315
           II+RDI R+HHF++G+CSCG FW
Sbjct: 608 IIVRDINRFHHFKDGSCSCGDFW 630


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