BLASTX nr result
ID: Ephedra27_contig00028578
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra27_contig00028578 (496 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006576583.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-19 ref|XP_006576582.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-19 ref|XP_006576581.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-19 ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19 ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citr... 100 2e-19 ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata] g... 100 2e-19 ref|NP_567948.1| pentatricopeptide repeat-containing protein [Ar... 100 3e-19 ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 100 3e-19 ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19 ref|XP_001761392.1| predicted protein [Physcomitrella patens] gi... 100 3e-19 gb|AFW62799.1| putative pentatricopeptide repeat family protein ... 99 5e-19 emb|CBI25078.3| unnamed protein product [Vitis vinifera] 99 5e-19 ref|XP_004298334.1| PREDICTED: putative pentatricopeptide repeat... 99 6e-19 gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygr... 99 6e-19 ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containi... 99 8e-19 ref|XP_004298471.1| PREDICTED: pentatricopeptide repeat-containi... 99 8e-19 ref|XP_004250455.1| PREDICTED: pentatricopeptide repeat-containi... 99 8e-19 ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi... 99 8e-19 gb|EXC24155.1| hypothetical protein L484_015170 [Morus notabilis] 98 1e-18 ref|XP_006663835.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18 >ref|XP_006576583.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like isoform X3 [Glycine max] Length = 652 Score = 101 bits (251), Expect = 1e-19 Identities = 43/86 (50%), Positives = 62/86 (72%) Frame = +1 Query: 58 NLTVRTDDSVQMKQHSYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKAT 237 ++ + DD+++ K YHSE++ A L+ P+ + I V KNLRVCSDCH ++F+SK T Sbjct: 567 SVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVT 626 Query: 238 KRKIILRDIRRYHHFENGTCSCGGFW 315 +R II+RDI R+HHF NG+CSCG +W Sbjct: 627 ERNIIVRDISRFHHFSNGSCSCGDYW 652 >ref|XP_006576582.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like isoform X2 [Glycine max] Length = 690 Score = 101 bits (251), Expect = 1e-19 Identities = 43/86 (50%), Positives = 62/86 (72%) Frame = +1 Query: 58 NLTVRTDDSVQMKQHSYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKAT 237 ++ + DD+++ K YHSE++ A L+ P+ + I V KNLRVCSDCH ++F+SK T Sbjct: 605 SVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVT 664 Query: 238 KRKIILRDIRRYHHFENGTCSCGGFW 315 +R II+RDI R+HHF NG+CSCG +W Sbjct: 665 ERNIIVRDISRFHHFSNGSCSCGDYW 690 >ref|XP_006576581.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like isoform X1 [Glycine max] Length = 698 Score = 101 bits (251), Expect = 1e-19 Identities = 43/86 (50%), Positives = 62/86 (72%) Frame = +1 Query: 58 NLTVRTDDSVQMKQHSYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKAT 237 ++ + DD+++ K YHSE++ A L+ P+ + I V KNLRVCSDCH ++F+SK T Sbjct: 613 SVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVT 672 Query: 238 KRKIILRDIRRYHHFENGTCSCGGFW 315 +R II+RDI R+HHF NG+CSCG +W Sbjct: 673 ERNIIVRDISRFHHFSNGSCSCGDYW 698 >ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Citrus sinensis] Length = 882 Score = 100 bits (250), Expect = 2e-19 Identities = 42/69 (60%), Positives = 54/69 (78%) Frame = +1 Query: 109 HSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHFEN 288 HSE+L A ++NTP IRV KNLRVC+DCH+ +F+SK R+IILRD+RR+HHF+N Sbjct: 814 HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873 Query: 289 GTCSCGGFW 315 GTCSCG +W Sbjct: 874 GTCSCGDYW 882 >ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citrus clementina] gi|557551206|gb|ESR61835.1| hypothetical protein CICLE_v10014221mg [Citrus clementina] Length = 882 Score = 100 bits (250), Expect = 2e-19 Identities = 42/69 (60%), Positives = 54/69 (78%) Frame = +1 Query: 109 HSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHFEN 288 HSE+L A ++NTP IRV KNLRVC+DCH+ +F+SK R+IILRD+RR+HHF+N Sbjct: 814 HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873 Query: 289 GTCSCGGFW 315 GTCSCG +W Sbjct: 874 GTCSCGDYW 882 >ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata] gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata] Length = 824 Score = 100 bits (250), Expect = 2e-19 Identities = 41/69 (59%), Positives = 53/69 (76%) Frame = +1 Query: 109 HSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHFEN 288 HSE+L A LI TP++ IR+FKNLRVC DCH +F+SK T+R+II+RD R+HHF+N Sbjct: 756 HSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKN 815 Query: 289 GTCSCGGFW 315 G CSCG +W Sbjct: 816 GVCSCGDYW 824 >ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 823 Score = 100 bits (248), Expect = 3e-19 Identities = 41/69 (59%), Positives = 53/69 (76%) Frame = +1 Query: 109 HSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHFEN 288 HSE+L A LI TP++ IR+FKNLRVC DCH +F+SK T+R+II+RD R+HHF+N Sbjct: 755 HSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKN 814 Query: 289 GTCSCGGFW 315 G CSCG +W Sbjct: 815 GVCSCGDYW 823 >ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g33170-like [Cucumis sativus] Length = 1573 Score = 99.8 bits (247), Expect = 3e-19 Identities = 42/70 (60%), Positives = 52/70 (74%) Frame = +1 Query: 106 YHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHFE 285 YHSE+L A LI+TP IRV KNLRVC DCH ++ +SK T+R+I+LRD R+HHF Sbjct: 1504 YHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFR 1563 Query: 286 NGTCSCGGFW 315 NGTCSCG +W Sbjct: 1564 NGTCSCGDYW 1573 >ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like [Cucumis sativus] Length = 1573 Score = 99.8 bits (247), Expect = 3e-19 Identities = 42/70 (60%), Positives = 52/70 (74%) Frame = +1 Query: 106 YHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHFE 285 YHSE+L A LI+TP IRV KNLRVC DCH ++ +SK T+R+I+LRD R+HHF Sbjct: 1504 YHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFR 1563 Query: 286 NGTCSCGGFW 315 NGTCSCG +W Sbjct: 1564 NGTCSCGDYW 1573 >ref|XP_001761392.1| predicted protein [Physcomitrella patens] gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens] Length = 833 Score = 99.8 bits (247), Expect = 3e-19 Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 2/92 (2%) Frame = +1 Query: 46 YIHVNLTVRTDDSVQMKQH--SYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFME 219 YI + V D Q K+ SYHSE+L A +++ PS IR++KNLRVCSDCH + Sbjct: 742 YIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASK 801 Query: 220 FVSKATKRKIILRDIRRYHHFENGTCSCGGFW 315 F+SK T R+II RD R+HHF++G CSCG +W Sbjct: 802 FISKVTGREIIARDASRFHHFKDGVCSCGDYW 833 >gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays] Length = 882 Score = 99.4 bits (246), Expect = 5e-19 Identities = 42/71 (59%), Positives = 53/71 (74%) Frame = +1 Query: 103 SYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHF 282 S+HSE+L A LI+TPS IRV KNLR+C DCH +++SK R+II+RDI R+HHF Sbjct: 812 SHHSERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHF 871 Query: 283 ENGTCSCGGFW 315 NGTCSCG +W Sbjct: 872 TNGTCSCGDYW 882 >emb|CBI25078.3| unnamed protein product [Vitis vinifera] Length = 494 Score = 99.4 bits (246), Expect = 5e-19 Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 2/98 (2%) Frame = +1 Query: 28 WN*KVLYIHVNLTVRTDDSVQMKQH--SYHSEQLVTALVLINTPSEVAIRVFKNLRVCSD 201 WN + Y L +D K+H + HSE+L A +I+TP + AIR+FKNLRVC D Sbjct: 400 WNAIISYYSFVLQDVEEDE---KEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGD 456 Query: 202 CHRFMEFVSKATKRKIILRDIRRYHHFENGTCSCGGFW 315 CH +F+S+ T+R+I++RD +R+HHF+NG CSCG +W Sbjct: 457 CHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 494 >ref|XP_004298334.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g68930-like [Fragaria vesca subsp. vesca] Length = 743 Score = 99.0 bits (245), Expect = 6e-19 Identities = 45/80 (56%), Positives = 58/80 (72%) Frame = +1 Query: 76 DDSVQMKQHSYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIIL 255 D+ +MK +YHSE+L A LI PS + IRV KNLRVC DCH +++SK TKR+I++ Sbjct: 664 DELQKMKMLNYHSERLAIAFGLIFIPSGLPIRVVKNLRVCGDCHNATKYISKITKREILV 723 Query: 256 RDIRRYHHFENGTCSCGGFW 315 RD RYH F++GTCSCG FW Sbjct: 724 RDAVRYHLFKDGTCSCGDFW 743 >gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica] Length = 837 Score = 99.0 bits (245), Expect = 6e-19 Identities = 47/92 (51%), Positives = 60/92 (65%), Gaps = 2/92 (2%) Frame = +1 Query: 46 YIHVNLTVRTDDSVQMKQH--SYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFME 219 YI V V + Q K+ SYHSE+L A +++ PS IR+FKNLRVC DCH + Sbjct: 746 YIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASK 805 Query: 220 FVSKATKRKIILRDIRRYHHFENGTCSCGGFW 315 F+SK T R+II RD R+HHF+NG CSCG +W Sbjct: 806 FISKVTGREIIARDASRFHHFKNGVCSCGDYW 837 >ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Solanum tuberosum] Length = 889 Score = 98.6 bits (244), Expect = 8e-19 Identities = 40/69 (57%), Positives = 52/69 (75%) Frame = +1 Query: 109 HSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHFEN 288 HSE+L A ++NTP IR+ KNLRVC+DCH +F+SK R+II+RD+RR+HHF N Sbjct: 821 HSEKLAIAFGILNTPPGTPIRIAKNLRVCNDCHEATKFISKIVNREIIVRDVRRFHHFRN 880 Query: 289 GTCSCGGFW 315 GTCSCG +W Sbjct: 881 GTCSCGDYW 889 >ref|XP_004298471.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510, mitochondrial-like [Fragaria vesca subsp. vesca] Length = 614 Score = 98.6 bits (244), Expect = 8e-19 Identities = 43/71 (60%), Positives = 53/71 (74%) Frame = +1 Query: 103 SYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIRRYHHF 282 S+HSE+L A L++ E +IRV KNLR+C DCH F +FVSKATKR+II+RD R+HHF Sbjct: 544 SHHSEKLAIAFSLLSLQPECSIRVVKNLRICDDCHSFCKFVSKATKREIIMRDKIRFHHF 603 Query: 283 ENGTCSCGGFW 315 NG CSC FW Sbjct: 604 RNGECSCNNFW 614 >ref|XP_004250455.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like [Solanum lycopersicum] Length = 653 Score = 98.6 bits (244), Expect = 8e-19 Identities = 42/80 (52%), Positives = 55/80 (68%) Frame = +1 Query: 76 DDSVQMKQHSYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIIL 255 D + ++ YHSE+L A L+N+PS IR+ KN+RVC DCH +FVSK R+IIL Sbjct: 574 DQQEREERLQYHSERLALAFALLNSPSGSPIRIKKNIRVCGDCHTAFKFVSKVVDREIIL 633 Query: 256 RDIRRYHHFENGTCSCGGFW 315 RD R+HHF NG+CSCG +W Sbjct: 634 RDTNRFHHFRNGSCSCGDYW 653 >ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like [Vitis vinifera] Length = 848 Score = 98.6 bits (244), Expect = 8e-19 Identities = 41/76 (53%), Positives = 59/76 (77%), Gaps = 2/76 (2%) Frame = +1 Query: 94 KQH--SYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRKIILRDIR 267 K+H + HSE+L A +I+TP + AIR+FKNLRVC DCH +F+S+ T+R+I++RD + Sbjct: 773 KEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSK 832 Query: 268 RYHHFENGTCSCGGFW 315 R+HHF+NG CSCG +W Sbjct: 833 RFHHFKNGICSCGDYW 848 >gb|EXC24155.1| hypothetical protein L484_015170 [Morus notabilis] Length = 602 Score = 98.2 bits (243), Expect = 1e-18 Identities = 42/83 (50%), Positives = 59/83 (71%) Frame = +1 Query: 67 VRTDDSVQMKQHSYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRK 246 ++ D+ + YHSE++ A LI+T E +R+ KNLR+C DCH F++FVSK KRK Sbjct: 520 LKIDEEEKQTILHYHSEKIAIAFGLISTGPETPLRIVKNLRICEDCHAFIKFVSKIYKRK 579 Query: 247 IILRDIRRYHHFENGTCSCGGFW 315 II+RD +R+HHFE+GTCSC +W Sbjct: 580 IIVRDRKRFHHFEHGTCSCMDYW 602 >ref|XP_006663835.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like [Oryza brachyantha] Length = 630 Score = 97.8 bits (242), Expect = 1e-18 Identities = 44/83 (53%), Positives = 59/83 (71%) Frame = +1 Query: 67 VRTDDSVQMKQHSYHSEQLVTALVLINTPSEVAIRVFKNLRVCSDCHRFMEFVSKATKRK 246 V TD ++ + HSE+L A LI+ P V I ++KNLR+C DCH FM+ VS T+RK Sbjct: 550 VHTDQKEELLKD--HSEKLAFAFGLISLPPNVPITIYKNLRICGDCHSFMKIVSCITERK 607 Query: 247 IILRDIRRYHHFENGTCSCGGFW 315 II+RDI R+HHF++G+CSCG FW Sbjct: 608 IIVRDINRFHHFKDGSCSCGDFW 630