BLASTX nr result
ID: Ephedra27_contig00028529
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00028529
(390 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
emb|CBI36131.3| unnamed protein product [Vitis vinifera] 82 1e-13
ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi... 75 9e-12
ref|XP_006341682.1| PREDICTED: putative pentatricopeptide repeat... 75 1e-11
ref|XP_003629226.1| Pentatricopeptide repeat-containing protein ... 74 2e-11
ref|XP_002534373.1| pentatricopeptide repeat-containing protein,... 74 2e-11
gb|EMJ22213.1| hypothetical protein PRUPE_ppa023643mg, partial [... 73 4e-11
ref|XP_006426947.1| hypothetical protein CICLE_v10027522mg, part... 72 1e-10
gb|EMT01370.1| hypothetical protein F775_14713 [Aegilops tauschii] 72 1e-10
ref|XP_004236458.1| PREDICTED: putative pentatricopeptide repeat... 72 1e-10
ref|XP_004235427.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
gb|ESW22630.1| hypothetical protein PHAVU_005G169000g [Phaseolus... 70 2e-10
gb|EXB74521.1| hypothetical protein L484_026217 [Morus notabilis] 70 3e-10
ref|XP_006361605.1| PREDICTED: pentatricopeptide repeat-containi... 70 3e-10
ref|XP_006826850.1| hypothetical protein AMTR_s00010p00113430 [A... 70 3e-10
ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containi... 70 3e-10
emb|CBI26355.3| unnamed protein product [Vitis vinifera] 70 3e-10
ref|XP_006465624.1| PREDICTED: pentatricopeptide repeat-containi... 70 4e-10
ref|XP_006350660.1| PREDICTED: pentatricopeptide repeat-containi... 69 8e-10
>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 81.6 bits (200), Expect = 1e-13
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Frame = +2
Query: 8 HSTTIPAIFCRPCSSQHGYMSAETHMPPRNYHIVDQC---ETLDTLKQVHAIKIITGEIA 178
H IP+ CS+ H + T ++ C + + KQ+HA + G
Sbjct: 54 HLKAIPS-----CSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGF 108
Query: 179 DKIVATKMIVMYGVFDAMECAQTVFNIAYERNVYLWNALIRGYSRNGPYEKAIQTYHQMR 358
D ++ATK++ +Y V D++ A+ +F+ + N++LWN LIRGY+ NGPYE A+Q Y+QM
Sbjct: 109 DTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF 168
Query: 359 GALIDPDKFT 388
+ PD FT
Sbjct: 169 DYGLVPDNFT 178
>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 81.6 bits (200), Expect = 1e-13
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Frame = +2
Query: 8 HSTTIPAIFCRPCSSQHGYMSAETHMPPRNYHIVDQC---ETLDTLKQVHAIKIITGEIA 178
H IP+ CS+ H + T ++ C + + KQ+HA + G
Sbjct: 54 HLKAIPS-----CSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGF 108
Query: 179 DKIVATKMIVMYGVFDAMECAQTVFNIAYERNVYLWNALIRGYSRNGPYEKAIQTYHQMR 358
D ++ATK++ +Y V D++ A+ +F+ + N++LWN LIRGY+ NGPYE A+Q Y+QM
Sbjct: 109 DTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF 168
Query: 359 GALIDPDKFT 388
+ PD FT
Sbjct: 169 DYGLVPDNFT 178
>ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 75.5 bits (184), Expect = 7e-12
Identities = 41/116 (35%), Positives = 69/116 (59%), Gaps = 9/116 (7%)
Frame = +2
Query: 68 SAETHMP--PRNYH----IVDQC---ETLDTLKQVHAIKIITGEIADKIVATKMIVMYGV 220
S+ +H+ P +YH ++ C +L T +Q+H +++G D ++ATK++ +Y
Sbjct: 50 SSNSHIASSPNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAA 109
Query: 221 FDAMECAQTVFNIAYERNVYLWNALIRGYSRNGPYEKAIQTYHQMRGALIDPDKFT 388
+ A+ +F+ +RNV+LWN LIR Y+R+GP+E AIQ Y M ++PD FT
Sbjct: 110 CGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFT 165
>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +2
Query: 137 KQVHAIKIITGEIADKIVATKMIVMYGVFDAMECAQTVFNIAYERNVYLWNALIRGYSRN 316
KQ+HA G + ++ATK++ +Y + +++ A +F+ +RN++LWN +IRGY+ N
Sbjct: 21 KQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWN 80
Query: 317 GPYEKAIQTYHQMRGALIDPDKFT 388
GPYE AI Y+QMR + PDKFT
Sbjct: 81 GPYELAISLYYQMRDYGLVPDKFT 104
>ref|XP_006341682.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Solanum tuberosum]
Length = 752
Score = 74.7 bits (182), Expect = 1e-11
Identities = 35/113 (30%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Frame = +2
Query: 56 HGYMSAETHMPPRNYHIVDQCETLDTLKQVHAIKIITGEIADKIVATKMIVMYGVFDA-- 229
H ++S E H+P ++ ++++C+++D L+Q+H++ I G I+D + + +I +
Sbjct: 39 HLHLSPEIHLPLQS--LIERCKSMDQLRQIHSVIIQKGLISDPKLCSNIIAFCSNNELGD 96
Query: 230 MECAQTVFNIAYERNVYLWNALIRGYSRNGPYEKAIQTYHQMRGALIDPDKFT 388
M+ A++VF+I ER V++WN +I+GYSR + + Y +M + PD +T
Sbjct: 97 MKYARSVFDIMPERGVFIWNTMIKGYSRENSPQNGVSIYREMLNNNVQPDNYT 149
>ref|XP_003629226.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523248|gb|AET03702.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 510
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Frame = +2
Query: 74 ETHMPPRNYHIVDQ---CETLDTLKQVHAIKIITGEIADKIVATKMIVMYGVFDA--MEC 238
E ++ ++H DQ C+T+D +KQ HA II G D +A K+I Y +E
Sbjct: 13 EPNLQKTSFHYTDQLHHCKTIDRIKQTHAQIIIGGHKQDPFIAAKLIDKYSQLGGTNVEH 72
Query: 239 AQTVFNIAYERNVYLWNALIRGYSRNGPYEKAIQTYHQMRGALIDPDKFT 388
A+ VF+ ER+V+ WN +I+GY+ GP+ +A+ Y+ MR + P+++T
Sbjct: 73 ARKVFDDLSERDVFCWNNVIKGYANMGPFAEALHVYNAMRLSGAAPNRYT 122
>ref|XP_002534373.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525413|gb|EEF28011.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 207
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Frame = +2
Query: 80 HMPPRNYH------IVDQCETLDTLKQVHAIKIITGEIADKIVATKMIVMYGVFDA-MEC 238
H P NYH +++ C +L LK HA+ I TG +++TK+I + M+
Sbjct: 18 HFPKNNYHSLALNCLLNSCSSLSHLKLTHALTITTGFHNSLLLSTKLITSASALSSSMDY 77
Query: 239 AQTVFNIAYERNVYLWNALIRGYSRNGPYEKAIQTYHQMRGALIDPDKFT 388
A+ +F+ +R+V+LWN LIRGY+ GPY++A+ Y M PD +T
Sbjct: 78 ARKLFDKMPQRDVFLWNTLIRGYADLGPYQEAVMLYKTMHHDGFLPDNYT 127
>gb|EMJ22213.1| hypothetical protein PRUPE_ppa023643mg, partial [Prunus persica]
Length = 888
Score = 72.8 bits (177), Expect = 4e-11
Identities = 37/107 (34%), Positives = 58/107 (54%)
Frame = +2
Query: 68 SAETHMPPRNYHIVDQCETLDTLKQVHAIKIITGEIADKIVATKMIVMYGVFDAMECAQT 247
S T+ PR +++ C L +L Q+HA I++G D T +I Y +F A
Sbjct: 27 STTTNNYPRYLNLLSSCRDLKSLLQIHAHLIVSGLQQDNSTLTHLINSYSLFKKSGLASL 86
Query: 248 VFNIAYERNVYLWNALIRGYSRNGPYEKAIQTYHQMRGALIDPDKFT 388
VF+ A +V LWN++IR Y+R Y++A + YH M ++PD +T
Sbjct: 87 VFDSAQNPSVILWNSMIRAYTRANKYKEARKMYHSMLEQGVEPDNYT 133
>ref|XP_006426947.1| hypothetical protein CICLE_v10027522mg, partial [Citrus clementina]
gi|557528937|gb|ESR40187.1| hypothetical protein
CICLE_v10027522mg, partial [Citrus clementina]
Length = 488
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +2
Query: 137 KQVHAIKIITGEIADKIVATKMIVMYGVFDAMECAQTVFNIAYERNVYLWNALIRGYSRN 316
KQ+HA+ G ++ATK++ +Y D + A +F+ +RN++LWN LIRGY+ N
Sbjct: 29 KQIHALISQMGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRGYAWN 88
Query: 317 GPYEKAIQTYHQMRGALIDPDKFT 388
GPYE AI+ Y+++ + PD FT
Sbjct: 89 GPYEVAIELYYRLLEFGLVPDNFT 112
>gb|EMT01370.1| hypothetical protein F775_14713 [Aegilops tauschii]
Length = 637
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Frame = +2
Query: 41 PCSSQHGYMSAETHMPPRNYHIVDQCETLDTLK---QVHAIKIITGEIADKIVATKMIVM 211
P S + ++++ H R I+ C +L+ ++H +++G D +++TK++ +
Sbjct: 47 PPPSTNSHLASSPHSYHRYASILQSCVAAGSLRAGRKLHGRLLVSGLGPDTVLSTKLVDL 106
Query: 212 YGVFDAMECAQTVFNIAYERNVYLWNALIRGYSRNGPYEKAIQTYHQMRGALIDPDKFT 388
Y + A+ +F+ +RNV+LWN LIR Y+R GP E A+Q Y M ++PD FT
Sbjct: 107 YAACGHVGQARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVQLYRGMAEHGVEPDNFT 165
>ref|XP_004236458.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Solanum lycopersicum]
Length = 752
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/113 (30%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Frame = +2
Query: 56 HGYMSAETHMPPRNYHIVDQCETLDTLKQVHAIKIITGEIADKIVATKMIVMYGVFDA-- 229
H ++S E H+P ++ ++++C+++D L+Q+ ++ I G I+D + + MI ++
Sbjct: 39 HLHLSPEIHLPLQS--LIEKCKSMDQLRQIQSVIIQKGLISDPKLCSNMITFCSNNESGD 96
Query: 230 MECAQTVFNIAYERNVYLWNALIRGYSRNGPYEKAIQTYHQMRGALIDPDKFT 388
M+ A++VF+I ER V++WN +I+GYSR + Y +M + PD +T
Sbjct: 97 MKYARSVFDIMPERGVFIWNTMIKGYSRENIPHDGVSIYREMLNNNVKPDNYT 149
>ref|XP_004235427.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Solanum lycopersicum]
Length = 606
Score = 71.2 bits (173), Expect = 1e-10
Identities = 38/84 (45%), Positives = 52/84 (61%)
Frame = +2
Query: 137 KQVHAIKIITGEIADKIVATKMIVMYGVFDAMECAQTVFNIAYERNVYLWNALIRGYSRN 316
KQ+HA +TG + +ATK++ +Y V D + A +F+ + N++LWN LIRGY+ N
Sbjct: 53 KQLHAHLCLTGLGYNINLATKLVNLYCVCDKLPNAHHLFDRIPKGNIFLWNVLIRGYAWN 112
Query: 317 GPYEKAIQTYHQMRGALIDPDKFT 388
GPYE AI YHQM PD FT
Sbjct: 113 GPYEAAISLYHQMIDYGHVPDNFT 136
>gb|ESW22630.1| hypothetical protein PHAVU_005G169000g [Phaseolus vulgaris]
Length = 631
Score = 70.5 bits (171), Expect = 2e-10
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Frame = +2
Query: 50 SQHGYMSAETHMPPRNY---HIVDQCETLDTL---KQVHAIKIITGEIADKIVATKMIVM 211
S H + + P +Y +++ C +L L KQ+HA G ++ +ATK++
Sbjct: 43 SLHAQVQSFPSSPSNHYCYASLLESCISLKALRPGKQLHARLCQLGIAYNQDLATKLVNF 102
Query: 212 YGVFDAMECAQTVFNIAYERNVYLWNALIRGYSRNGPYEKAIQTYHQMRGALIDPDKFT 388
Y V +++ A +F+ + N++LWN LIR Y+ NGP+E AI YHQM + PD FT
Sbjct: 103 YSVCNSLRNAHQLFDQIPKGNLFLWNVLIRAYAWNGPHEVAISLYHQMLEYGLKPDNFT 161
>gb|EXB74521.1| hypothetical protein L484_026217 [Morus notabilis]
Length = 651
Score = 70.1 bits (170), Expect = 3e-10
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Frame = +2
Query: 80 HMPPRNYH--IVDQCETLDTLK---QVHAIKIITGEIADKIVATKMIVMYGVFDAMECAQ 244
H P +Y+ ++ C T +K Q+H+ G + +ATK++ MY V ++ A
Sbjct: 73 HGAPASYYASLIQSCITRKAIKPGKQLHSHLCQMGLGFNTFLATKLVNMYCVCGSLWNAH 132
Query: 245 TVFNIAYERNVYLWNALIRGYSRNGPYEKAIQTYHQMRGALIDPDKFT 388
+F+ +RN++LWN LIRGY+ NGPYE AI Y+QM + PD++T
Sbjct: 133 HLFDRIPKRNLFLWNVLIRGYAWNGPYEVAIALYNQMFDCGLVPDRYT 180
>ref|XP_006361605.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Solanum tuberosum]
Length = 602
Score = 70.1 bits (170), Expect = 3e-10
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = +2
Query: 137 KQVHAIKIITGEIADKIVATKMIVMYGVFDAMECAQTVFNIAYERNVYLWNALIRGYSRN 316
KQ+HA +TG + +ATK++ +Y V D + A +F+ + N++LWN LIRGY+ N
Sbjct: 49 KQLHAHLCLTGLGYNINLATKLVNLYSVCDKLPNAHHLFDRIPKGNIFLWNVLIRGYAWN 108
Query: 317 GPYEKAIQTYHQMRGALIDPDKFT 388
GPYE AI Y+QM PD FT
Sbjct: 109 GPYEAAISLYYQMIDYGHVPDNFT 132
>ref|XP_006826850.1| hypothetical protein AMTR_s00010p00113430 [Amborella trichopoda]
gi|548831279|gb|ERM94087.1| hypothetical protein
AMTR_s00010p00113430 [Amborella trichopoda]
Length = 608
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/95 (36%), Positives = 53/95 (55%)
Frame = +2
Query: 104 IVDQCETLDTLKQVHAIKIITGEIADKIVATKMIVMYGVFDAMECAQTVFNIAYERNVYL 283
I D+ L L+++HA I G +D +V +I Y AM+CA +F + V
Sbjct: 386 ICDEPRELAKLQEIHAYAIRNGHQSDDLVGNALIAAYAKCGAMDCADILFKGMGFKTVCS 445
Query: 284 WNALIRGYSRNGPYEKAIQTYHQMRGALIDPDKFT 388
WNALI GY++NG KA Q +H+M + ++PD F+
Sbjct: 446 WNALIGGYAQNGDANKATQLFHRMGSSGLEPDSFS 480
>ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +2
Query: 83 MPPRNYHIVDQCETLDTLKQVHAIKIITGEIAD-KIVATKMIVMYGVFDAMECAQTVFNI 259
M P HI+ C+TL +LK +HA +I +A + V K++ +Y F A + A VF+
Sbjct: 1 MNPPILHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDE 60
Query: 260 AYERNVYLWNALIRGYSRNGPYEKAIQTYHQMRGALIDPDKFT 388
+ N YLW +LI GY N Y++A + QMR I FT
Sbjct: 61 ITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFT 103
>emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +2
Query: 83 MPPRNYHIVDQCETLDTLKQVHAIKIITGEIAD-KIVATKMIVMYGVFDAMECAQTVFNI 259
M P HI+ C+TL +LK +HA +I +A + V K++ +Y F A + A VF+
Sbjct: 1 MNPPILHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDE 60
Query: 260 AYERNVYLWNALIRGYSRNGPYEKAIQTYHQMRGALIDPDKFT 388
+ N YLW +LI GY N Y++A + QMR I FT
Sbjct: 61 ITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFT 103
>ref|XP_006465624.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Citrus sinensis]
Length = 644
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/84 (39%), Positives = 52/84 (61%)
Frame = +2
Query: 137 KQVHAIKIITGEIADKIVATKMIVMYGVFDAMECAQTVFNIAYERNVYLWNALIRGYSRN 316
KQ+HA+ G ++ATK++ +Y D + A +F+ +RN++LWN LIR Y+ N
Sbjct: 91 KQIHALISQMGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWN 150
Query: 317 GPYEKAIQTYHQMRGALIDPDKFT 388
GPYE AI+ Y+++ + PD FT
Sbjct: 151 GPYEVAIELYYRLLEIGLVPDNFT 174
>ref|XP_006350660.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Solanum tuberosum]
Length = 668
Score = 68.6 bits (166), Expect = 8e-10
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +2
Query: 101 HIVDQCETLDTLKQVHAIKIITGEIADK-IVATKMIVMYGVFDAMECAQTVFNIAYERNV 277
H++ C+TL LK VHA ++ G IA +V K+I +Y F A A+ VF+ ERN
Sbjct: 7 HLLQTCKTLHRLKSVHAHLLVCGSIASSDLVLNKIIRLYSRFGATNYARKVFDEIPERNP 66
Query: 278 YLWNALIRGYSRNGPYEKAIQTYHQMRGALIDPDKFT 388
+LW ++I GY N + +A + MR + P FT
Sbjct: 67 FLWTSIIHGYVENSQHTEAFSLFRDMRIGDVTPLNFT 103