BLASTX nr result

ID: Ephedra27_contig00028520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00028520
         (642 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77783.1| unknown [Picea sitchensis]                              75   1e-11
ref|XP_002987956.1| hypothetical protein SELMODRAFT_447153 [Sela...    57   5e-06
ref|XP_002991331.1| hypothetical protein SELMODRAFT_448377 [Sela...    57   5e-06

>gb|ADE77783.1| unknown [Picea sitchensis]
          Length = 288

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 38/83 (45%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
 Frame = +3

Query: 405 KDKKLQ----LNKVNEAKGSCVDDADIVFQSAKEQLHWFIESFQASANIKYSSLELQEIP 572
           KDK +     ++K  + + +  D  ++   S++EQL WFI +FQA+   K SSLELQEIP
Sbjct: 59  KDKAMSTVKAVHKPAKHQVAAADKGNVELGSSREQLDWFISAFQAATRTKLSSLELQEIP 118

Query: 573 ENAMVSLSSSWDHSIENLSKHTK 641
           EN+M+ LS++ DH+I NL KH K
Sbjct: 119 ENSMLELSNTMDHNIHNLMKHVK 141


>ref|XP_002987956.1| hypothetical protein SELMODRAFT_447153 [Selaginella moellendorffii]
           gi|300144345|gb|EFJ11030.1| hypothetical protein
           SELMODRAFT_447153 [Selaginella moellendorffii]
          Length = 242

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/72 (40%), Positives = 45/72 (62%)
 Frame = +3

Query: 426 NKVNEAKGSCVDDADIVFQSAKEQLHWFIESFQASANIKYSSLELQEIPENAMVSLSSSW 605
           N  ++A  + VD  DI F+S ++Q  WF  +F+A  +   SSLE+  +P++AMV + S+ 
Sbjct: 26  NAPSKAAAAPVDRNDIQFKSPRDQSSWFFSTFRAVHSSVLSSLEMGALPDDAMVEIPSNQ 85

Query: 606 DHSIENLSKHTK 641
           DH IENL+   K
Sbjct: 86  DHCIENLASVIK 97


>ref|XP_002991331.1| hypothetical protein SELMODRAFT_448377 [Selaginella moellendorffii]
           gi|300140911|gb|EFJ07629.1| hypothetical protein
           SELMODRAFT_448377 [Selaginella moellendorffii]
          Length = 242

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/72 (40%), Positives = 45/72 (62%)
 Frame = +3

Query: 426 NKVNEAKGSCVDDADIVFQSAKEQLHWFIESFQASANIKYSSLELQEIPENAMVSLSSSW 605
           N  ++A  + VD  DI F+S ++Q  WF  +F+A  +   SSLE+  +P++AMV + S+ 
Sbjct: 26  NAPSKAAAAPVDRNDIQFKSPRDQSSWFFSTFRAVHSSVLSSLEMGALPDDAMVEIPSNQ 85

Query: 606 DHSIENLSKHTK 641
           DH IENL+   K
Sbjct: 86  DHCIENLASVIK 97


Top