BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00028519
         (432 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGH20677.1| reverse transcriptase, partial [Olimarabidopsis c...   106   1e-32
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   105   2e-31
gb|AGH20678.1| reverse transcriptase, partial [Olimarabidopsis c...   101   3e-31
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   104   4e-31
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         104   4e-31
gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus]      106   5e-31
gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halle...   105   5e-31
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle...   105   5e-31
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle...   105   5e-31
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         103   6e-31
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   103   6e-31
gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halle...   107   7e-31
gb|AGH20672.1| reverse transcriptase, partial [Thlaspi arvense]       104   7e-31
gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halle...   104   9e-31
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]      105   1e-30
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   104   1e-30
gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wal...   106   1e-30
gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halle...   103   1e-30
gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halle...   103   2e-30
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle...   105   2e-30

>gb|AGH20677.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
          Length = 286

 Score =  106 bits (264), Expect(2) = 1e-32
 Identities = 52/103 (50%), Positives = 71/103 (68%)
 Frame = -1

Query: 309 KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
           K K +    +ERYK  LVAK Y  + GI Y E+F+PVAR+ETVR++I+       KIH +
Sbjct: 47  KAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNEWKIHQM 106

Query: 129 DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
           DVK+ FL+ +L+E+ Y+ QP GYI+ G  +KV KL K+LYGLK
Sbjct: 107 DVKSAFLNGDLEEEVYIEQPQGYIIKGEEDKVLKLKKALYGLK 149



 Score = 59.3 bits (142), Expect(2) = 1e-32
 Identities = 24/35 (68%), Positives = 31/35 (88%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           NAMDEE+N+I KN+TW+LV +P G+KAI VKW+YK
Sbjct: 13  NAMDEEINAIQKNDTWELVSLPNGQKAIGVKWVYK 47


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  105 bits (262), Expect(2) = 2e-31
 Identities = 52/103 (50%), Positives = 71/103 (68%)
 Frame = -1

Query: 309  KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
            K K +    +ERYK  LVAK Y  + GI Y E+F+PVAR+ETVR++I+       KIH +
Sbjct: 854  KAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQM 913

Query: 129  DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
            DVK+ FL+ +L+E+ Y+ QP GYIV G  +KV +L K+LYGLK
Sbjct: 914  DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLK 956



 Score = 55.8 bits (133), Expect(2) = 2e-31
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           NAMDEE+ SI KN+TW+L  +P G KAI VKW+YK
Sbjct: 820 NAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYK 854


>gb|AGH20678.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
          Length = 315

 Score =  101 bits (252), Expect(2) = 3e-31
 Identities = 52/103 (50%), Positives = 69/103 (66%)
 Frame = -1

Query: 309 KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
           K K +    +ERYK  LVAK Y  +  I Y E+F+PVAR+ETVR++I+       KIH +
Sbjct: 47  KAKKNSKGEVERYKARLVAKGYSQRAVIDYDEVFAPVARLETVRLIISLAPQNKWKIHQM 106

Query: 129 DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
           DVK+ FL+ +L+E+ Y+ QP GYIV G   KV KL K+LYGLK
Sbjct: 107 DVKSAFLNGDLEEEVYIEQPQGYIVKGEEAKVLKLKKALYGLK 149



 Score = 59.3 bits (142), Expect(2) = 3e-31
 Identities = 24/35 (68%), Positives = 31/35 (88%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           NAMDEE+N+I KN+TW+LV +P G+KAI VKW+YK
Sbjct: 13  NAMDEEINAIQKNDTWELVSLPNGQKAIGVKWVYK 47


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  104 bits (260), Expect(2) = 4e-31
 Identities = 53/103 (51%), Positives = 70/103 (67%)
 Frame = -1

Query: 309  KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
            K K +    +ERYK  LVAK Y  + GI Y EIF+PVAR+ETVR++I+       KIH +
Sbjct: 886  KAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQM 945

Query: 129  DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
            DVK+ FL+ +L+E+ Y+ QP GYIV G  +KV +L K LYGLK
Sbjct: 946  DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLK 988



 Score = 55.8 bits (133), Expect(2) = 4e-31
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           NAMDEE+ SI KN+TW+L  +P G KAI VKW+YK
Sbjct: 852 NAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYK 886


>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  104 bits (260), Expect(2) = 4e-31
 Identities = 53/103 (51%), Positives = 70/103 (67%)
 Frame = -1

Query: 309 KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
           K K +    +ERYK  LVAK Y  + GI Y EIF+PVAR+ETVR++I+       KIH +
Sbjct: 383 KAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQM 442

Query: 129 DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
           DVK+ FL+ +L+E+ Y+ QP GYIV G  +KV +L K LYGLK
Sbjct: 443 DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLK 485



 Score = 55.8 bits (133), Expect(2) = 4e-31
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           NAMDEE+ SI KN+TW+L  +P G KAI VKW+YK
Sbjct: 349 NAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYK 383


>gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  106 bits (264), Expect(2) = 5e-31
 Identities = 52/103 (50%), Positives = 71/103 (68%)
 Frame = -1

Query: 309 KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
           K K +    +ERYK  LVAK Y  + GI Y E+F+PVAR+ETVR++I+       KIH +
Sbjct: 47  KAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWKIHQM 106

Query: 129 DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
           DVK+ FL+ +L+E+ Y+ QP GYIV G  +KV +L K+LYGLK
Sbjct: 107 DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLK 149



 Score = 53.9 bits (128), Expect(2) = 5e-31
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           +AMDEE+ SI KN+TW+L  +P G KAI VKW+YK
Sbjct: 13  SAMDEEIKSIQKNDTWELASLPNGHKAIGVKWVYK 47


>gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  105 bits (262), Expect(2) = 5e-31
 Identities = 52/103 (50%), Positives = 71/103 (68%)
 Frame = -1

Query: 309 KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
           K K +    +ERYK  LVAK Y  + GI Y E+F+PVAR+ETVR++I+       KIH +
Sbjct: 47  KAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQM 106

Query: 129 DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
           DVK+ FL+ +L+E+ Y+ QP GYIV G  +KV +L K+LYGLK
Sbjct: 107 DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLK 149



 Score = 54.7 bits (130), Expect(2) = 5e-31
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           NAMDEE+ +I KN+TW+L  +P G KAI VKW+YK
Sbjct: 13  NAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYK 47


>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  105 bits (262), Expect(2) = 5e-31
 Identities = 52/103 (50%), Positives = 71/103 (68%)
 Frame = -1

Query: 309 KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
           K K +    +ERYK  LVAK Y  + GI Y E+F+PVAR+ETVR++I+       KIH +
Sbjct: 47  KAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQM 106

Query: 129 DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
           DVK+ FL+ +L+E+ Y+ QP GYIV G  +KV +L K+LYGLK
Sbjct: 107 DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLK 149



 Score = 54.7 bits (130), Expect(2) = 5e-31
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           NAMDEE+ +I KN+TW+L  +P G KAI VKW+YK
Sbjct: 13  NAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYK 47


>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera] gi|389595484|gb|AFK88545.1| reverse
           transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  105 bits (262), Expect(2) = 5e-31
 Identities = 52/103 (50%), Positives = 71/103 (68%)
 Frame = -1

Query: 309 KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
           K K +    +ERYK  LVAK Y  + GI Y E+F+PVAR+ETVR++I+       KIH +
Sbjct: 47  KAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQM 106

Query: 129 DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
           DVK+ FL+ +L+E+ Y+ QP GYIV G  +KV +L K+LYGLK
Sbjct: 107 DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLK 149



 Score = 54.7 bits (130), Expect(2) = 5e-31
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           NAMDEE+ +I KN+TW+L  +P G KAI VKW+YK
Sbjct: 13  NAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYK 47


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  103 bits (258), Expect(2) = 6e-31
 Identities = 52/103 (50%), Positives = 70/103 (67%)
 Frame = -1

Query: 309  KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
            K K +    +ERYK  LVAK Y  + GI Y E+F+PVAR+ETVR++I+       KIH +
Sbjct: 886  KAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQM 945

Query: 129  DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
            DVK+ FL+ +L+E+ Y+ QP GYIV G  +KV +L K LYGLK
Sbjct: 946  DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLK 988



 Score = 55.8 bits (133), Expect(2) = 6e-31
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           NAMDEE+ SI KN+TW+L  +P G KAI VKW+YK
Sbjct: 852 NAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYK 886


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  103 bits (258), Expect(2) = 6e-31
 Identities = 52/103 (50%), Positives = 70/103 (67%)
 Frame = -1

Query: 309  KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
            K K +    +ERYK  LVAK Y  + GI Y E+F+PVAR+ETVR++I+       KIH +
Sbjct: 886  KAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQM 945

Query: 129  DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
            DVK+ FL+ +L+E+ Y+ QP GYIV G  +KV +L K LYGLK
Sbjct: 946  DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLK 988



 Score = 55.8 bits (133), Expect(2) = 6e-31
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           NAMDEE+ SI KN+TW+L  +P G KAI VKW+YK
Sbjct: 852 NAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYK 886


>gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  107 bits (267), Expect(2) = 7e-31
 Identities = 53/103 (51%), Positives = 72/103 (69%)
 Frame = -1

Query: 309 KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
           K K +    +ERYK  LVAK Y  + GI Y E+F+PVAR+ETVR++I+       KIH +
Sbjct: 47  KAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQM 106

Query: 129 DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
           DVK+TFL+ +L+E+ Y+ QP GYIV G  +KV +L K+LYGLK
Sbjct: 107 DVKSTFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLK 149



 Score = 52.4 bits (124), Expect(2) = 7e-31
 Identities = 20/35 (57%), Positives = 28/35 (80%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           N+MDE++ +I KN+TW+L  +P G KAI VKW+YK
Sbjct: 13  NSMDEDIKAIKKNDTWELASLPNGHKAIGVKWVYK 47


>gb|AGH20672.1| reverse transcriptase, partial [Thlaspi arvense]
          Length = 315

 Score =  104 bits (259), Expect(2) = 7e-31
 Identities = 51/103 (49%), Positives = 71/103 (68%)
 Frame = -1

Query: 309 KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
           K K +    +ERYK  LVAK Y  + GI Y E+F+PVAR+ETVR++I+       +IH +
Sbjct: 47  KAKKNSKGEVERYKARLVAKDYSQRAGIDYDEVFAPVARLETVRLIISLAAQNRWRIHQM 106

Query: 129 DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
           DVK+ FL+ +L+E+ Y+ QP GYIV G  +KV +L K+LYGLK
Sbjct: 107 DVKSAFLNGDLEEEVYIEQPRGYIVKGEEDKVLRLKKALYGLK 149



 Score = 55.5 bits (132), Expect(2) = 7e-31
 Identities = 23/35 (65%), Positives = 27/35 (77%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           NAMDEE+ SI KN TW+L  +P G KAI VKW+YK
Sbjct: 13  NAMDEEIKSIQKNETWELASLPNGHKAIGVKWVYK 47


>gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  104 bits (260), Expect(2) = 9e-31
 Identities = 52/103 (50%), Positives = 70/103 (67%)
 Frame = -1

Query: 309 KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
           K K +    +ERYK  LVAK Y  + GI Y E+F+PVAR+ETVR++I        KIH +
Sbjct: 47  KAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIILLAAQNKWKIHQM 106

Query: 129 DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
           DVK+ FL+ +L+E+ Y+ QP GYIV G  +KV +L K+LYGLK
Sbjct: 107 DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLK 149



 Score = 54.7 bits (130), Expect(2) = 9e-31
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           NAMDEE+ +I KN+TW+L  +P G KAI VKW+YK
Sbjct: 13  NAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYK 47


>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  105 bits (261), Expect(2) = 1e-30
 Identities = 51/103 (49%), Positives = 71/103 (68%)
 Frame = -1

Query: 309 KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
           K K +    +ERYK  LVAK Y  + GI Y E+F+PVAR+ETVR++I+       +IH +
Sbjct: 47  KAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQM 106

Query: 129 DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
           DVK+ FL+ +L+E+ Y+ QP GYIV G  +KV +L K+LYGLK
Sbjct: 107 DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLK 149



 Score = 53.9 bits (128), Expect(2) = 1e-30
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           +AMDEE+ SI KN+TW+L  +P G KAI VKW+YK
Sbjct: 13  SAMDEEIKSIQKNDTWELASLPNGHKAIGVKWVYK 47


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  104 bits (259), Expect(2) = 1e-30
 Identities = 52/103 (50%), Positives = 71/103 (68%)
 Frame = -1

Query: 309  KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
            K K +    +ERYK  LVAK Y  + GI Y E+F+PVAR+ETVR++I+       KIH +
Sbjct: 886  KAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQM 945

Query: 129  DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
            DVK+ FL+ +L+E+ Y+ QP GYIV G  +KV +L K+LYGLK
Sbjct: 946  DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLK 988



 Score = 54.3 bits (129), Expect(2) = 1e-30
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           NAMDEE+ SI KN+TW+L  +P G K I VKW+YK
Sbjct: 852 NAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYK 886


>gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wallichii]
          Length = 315

 Score =  106 bits (265), Expect(2) = 1e-30
 Identities = 53/103 (51%), Positives = 71/103 (68%)
 Frame = -1

Query: 309 KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
           K K +    +ERYK  LVAK Y  K GI Y E+F+PVAR+ETVR++I+       KIH +
Sbjct: 47  KAKKNSKGEVERYKARLVAKGYSQKAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQM 106

Query: 129 DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
           DVK+ FL+ +L+E+ Y+ QP GYIV G  +KV +L K+LYGLK
Sbjct: 107 DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKTLYGLK 149



 Score = 52.0 bits (123), Expect(2) = 1e-30
 Identities = 21/34 (61%), Positives = 27/34 (79%)
 Frame = -2

Query: 410 AMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           AMDEE+ +I KN+TW+L  +P G KAI VKW+YK
Sbjct: 14  AMDEEIKAIQKNDTWELATLPNGHKAIGVKWVYK 47


>gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  103 bits (258), Expect(2) = 1e-30
 Identities = 52/103 (50%), Positives = 71/103 (68%)
 Frame = -1

Query: 309 KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
           K K +    +ERYK  LVAK Y  + GI Y E+F+PVAR+ETVR++I+       KIH +
Sbjct: 47  KAKKNSKGEVERYKGRLVAKGYCQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQM 106

Query: 129 DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
           DVK+ FL+ +L+E+ Y+ QP GYIV G  +KV +L K+LYGLK
Sbjct: 107 DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLK 149



 Score = 54.7 bits (130), Expect(2) = 1e-30
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           NAMDEE+ +I KN+TW+L  +P G KAI VKW+YK
Sbjct: 13  NAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYK 47


>gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  103 bits (257), Expect(2) = 2e-30
 Identities = 51/103 (49%), Positives = 71/103 (68%)
 Frame = -1

Query: 309 KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
           K K +    +ERYK  LVAK Y  + GI Y E+F+P+AR+ETVR++I+       KIH +
Sbjct: 47  KAKKNSKGEVERYKGRLVAKGYCQRAGIDYDEVFAPIARLETVRLIISLAAQNKWKIHQM 106

Query: 129 DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
           DVK+ FL+ +L+E+ Y+ QP GYIV G  +KV +L K+LYGLK
Sbjct: 107 DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLK 149



 Score = 54.7 bits (130), Expect(2) = 2e-30
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           NAMDEE+ +I KN+TW+L  +P G KAI VKW+YK
Sbjct: 13  NAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYK 47


>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  105 bits (262), Expect(2) = 2e-30
 Identities = 52/103 (50%), Positives = 71/103 (68%)
 Frame = -1

Query: 309 KLKSDENDRIERYKPSLVAKRYK*KPGIYYGEIFSPVARMETVRMLIAGTTHIGSKIHHV 130
           K K +    +ERYK  LVAK Y  + GI Y E+F+PVAR+ETVR++I+       KIH +
Sbjct: 47  KAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQM 106

Query: 129 DVKTTFLHEELQEKPYVTQP*GYIVNGNVEKVYKLNKSLYGLK 1
           DVK+ FL+ +L+E+ Y+ QP GYIV G  +KV +L K+LYGLK
Sbjct: 107 DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLK 149



 Score = 52.4 bits (124), Expect(2) = 2e-30
 Identities = 21/35 (60%), Positives = 27/35 (77%)
 Frame = -2

Query: 413 NAMDEEMNSIVKNNTWQLVDIPKGKKAIDVKWIYK 309
           NA DEE+ +I KN+TW+L  +P G KAI VKW+YK
Sbjct: 13  NATDEEIKAIKKNDTWELASLPNGHKAIGVKWVYK 47