BLASTX nr result

ID: Ephedra27_contig00028425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00028425
         (502 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76674.1| unknown [Picea sitchensis]                              60   4e-07
ref|XP_006827069.1| hypothetical protein AMTR_s00010p00236050 [A...    57   3e-06
ref|XP_006827067.1| hypothetical protein AMTR_s00010p00235420 [A...    57   3e-06

>gb|ADE76674.1| unknown [Picea sitchensis]
          Length = 335

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/108 (32%), Positives = 57/108 (52%)
 Frame = -3

Query: 326 SSATFSNENPSPSPRINNNDAHPHNVSAMSVFLVEGLGLSQSQILTVKKLYPGLFRPTPN 147
           S++T  N+ P+  P   N          +S FL+   GL +SQ+  + K  P L R    
Sbjct: 41  STSTAGNDRPTGYPEAKNT-------CPISEFLLNECGLCESQLSGILKKRPHLVRTRST 93

Query: 146 PLKRAQDVLTLLKEYGFSDAQIRNLASRHPRILSYRADENLRPKLEML 3
               AQ  + LL++ GF++ Q+  + +R+P IL+Y AD  L+PK+E +
Sbjct: 94  --HTAQQAVQLLRDSGFTEDQVCKIITRNPSILTYNADRQLKPKIEFM 139


>ref|XP_006827069.1| hypothetical protein AMTR_s00010p00236050 [Amborella trichopoda]
           gi|548831498|gb|ERM94306.1| hypothetical protein
           AMTR_s00010p00236050 [Amborella trichopoda]
          Length = 405

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
 Frame = -3

Query: 341 FHFYSSSATFSNENPSPSPRINNNDAHPHNVSAMSV-FLVEGLGLSQSQILTVKKLYP-G 168
           F  YS+  +    +PS +       A P + S+  V  L++ LGLS+   L V      G
Sbjct: 31  FELYSTKTSLLTPSPSLTRDGLLLSASPSSTSSSIVNLLMDSLGLSKESALAVASSSRLG 90

Query: 167 LFRPTPNPLKRAQDVLTLLKEYGFSDAQIRNLASRHPRILSYRADENLRPKLEML 3
           L +PT NP+     VL  LK+ GF DA I ++ ++ PRIL    ++ L+PK EML
Sbjct: 91  LNKPTKNPIC----VLKFLKDSGFHDAHICSIVTKSPRILVADVEKTLKPKFEML 141


>ref|XP_006827067.1| hypothetical protein AMTR_s00010p00235420 [Amborella trichopoda]
           gi|548831496|gb|ERM94304.1| hypothetical protein
           AMTR_s00010p00235420 [Amborella trichopoda]
          Length = 405

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
 Frame = -3

Query: 341 FHFYSSSATFSNENPS-PSPRINNNDAHPHNVSAMSVFLVEGLGLSQSQILTVKKLYP-G 168
           F  YS+  +    +PS     +  + + P + S++   L++ LGLS+   L V      G
Sbjct: 31  FELYSTKTSLLTPSPSLTGDGLLLSASPPSSSSSIVNLLMDSLGLSKESALAVASSSGLG 90

Query: 167 LFRPTPNPLKRAQDVLTLLKEYGFSDAQIRNLASRHPRILSYRADENLRPKLEML 3
           L +PT NP+     VL  LK+ GF DA I ++ ++ P+IL    ++ L+PK EML
Sbjct: 91  LNKPTKNPIC----VLNFLKDSGFHDAHICSIVTKSPKILVANVEKTLKPKFEML 141


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