BLASTX nr result

ID: Ephedra27_contig00028422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00028422
         (364 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001775171.1| predicted protein [Physcomitrella patens] gi...    69   6e-10
ref|XP_001782576.1| predicted protein [Physcomitrella patens] gi...    60   4e-07

>ref|XP_001775171.1| predicted protein [Physcomitrella patens]
           gi|162673510|gb|EDQ60032.1| predicted protein
           [Physcomitrella patens]
          Length = 1110

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 37/95 (38%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
 Frame = +3

Query: 3   RDVFEPFPPFLLKKKEIRKRSGFFS-EVMKINKNKATSDS----NNATHCNKDYKVNSNK 167
           RDVFEPFP FLL+ KEIR RSG+FS + ++ + +K T+ +    ++    ++   + SNK
Sbjct: 449 RDVFEPFPAFLLQDKEIRGRSGWFSNDTVRESASKLTNLTQKMWDDLEDMDESEPLKSNK 508

Query: 168 DMELLKKLIEAFPPIEEMQNCSSEIELIFKLGKPW 272
           + ELL++++ + PPI+++Q C+ E  L   L + W
Sbjct: 509 NSELLREILASIPPIDKIQKCADERSLKKVLTRSW 543


>ref|XP_001782576.1| predicted protein [Physcomitrella patens]
           gi|162665896|gb|EDQ52565.1| predicted protein
           [Physcomitrella patens]
          Length = 939

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
 Frame = +3

Query: 3   RDVFEPFPPFLLKKKEIRKRSGFFSEVMKINKNKATSDSNNATHCNKDYK---------- 152
           RDVFEPFP F L+K E+R RSG+FS     N N + + S +       Y+          
Sbjct: 448 RDVFEPFPAFSLQKDELRLRSGWFS-----NNNMSETASRSKNRIKTAYQMPILGAVEDE 502

Query: 153 ---VNSNKDMELLKKLIEAFPPIEEMQNCSSEIELIFKLGKPW 272
              V SNK+ + L + + + PPI  +Q C+ E  L   L + W
Sbjct: 503 KSAVQSNKNTKQLSEALASIPPINVLQKCADERSLKRVLARAW 545


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